2020-08-21 17:11:38 +03:00
|
|
|
|
---
|
|
|
|
|
title: Layers and Model Architectures
|
|
|
|
|
teaser: Power spaCy components with custom neural networks
|
|
|
|
|
menu:
|
|
|
|
|
- ['Type Signatures', 'type-sigs']
|
|
|
|
|
- ['Defining Sublayers', 'sublayers']
|
|
|
|
|
- ['PyTorch & TensorFlow', 'frameworks']
|
|
|
|
|
- ['Trainable Components', 'components']
|
2020-08-21 17:21:55 +03:00
|
|
|
|
next: /usage/projects
|
2020-08-21 17:11:38 +03:00
|
|
|
|
---
|
|
|
|
|
|
2020-08-22 14:52:52 +03:00
|
|
|
|
A **model architecture** is a function that wires up a
|
2020-08-21 17:11:38 +03:00
|
|
|
|
[Thinc `Model`](https://thinc.ai/docs/api-model) instance, which you can then
|
|
|
|
|
use in a component or as a layer of a larger network. You can use Thinc as a
|
|
|
|
|
thin wrapper around frameworks such as PyTorch, TensorFlow or MXNet, or you can
|
|
|
|
|
implement your logic in Thinc directly. spaCy's built-in components will never
|
|
|
|
|
construct their `Model` instances themselves, so you won't have to subclass the
|
|
|
|
|
component to change its model architecture. You can just **update the config**
|
|
|
|
|
so that it refers to a different registered function. Once the component has
|
|
|
|
|
been created, its model instance has already been assigned, so you cannot change
|
|
|
|
|
its model architecture. The architecture is like a recipe for the network, and
|
|
|
|
|
you can't change the recipe once the dish has already been prepared. You have to
|
|
|
|
|
make a new one.
|
|
|
|
|
|
2020-08-21 20:34:06 +03:00
|
|
|
|
<!-- TODO: maybe we can come up with an illustration here that shows how the pieces fit together? -->
|
|
|
|
|
|
2020-08-21 17:11:38 +03:00
|
|
|
|
## Type signatures {#type-sigs}
|
|
|
|
|
|
2020-08-21 20:34:06 +03:00
|
|
|
|
<!-- TODO: update example, maybe simplify definition? -->
|
|
|
|
|
|
|
|
|
|
> #### Example
|
|
|
|
|
>
|
|
|
|
|
> ```python
|
|
|
|
|
> @spacy.registry.architectures.register("spacy.Tagger.v1")
|
|
|
|
|
> def build_tagger_model(
|
|
|
|
|
> tok2vec: Model[List[Doc], List[Floats2d]], nO: Optional[int] = None
|
|
|
|
|
> ) -> Model[List[Doc], List[Floats2d]]:
|
|
|
|
|
> t2v_width = tok2vec.get_dim("nO") if tok2vec.has_dim("nO") else None
|
|
|
|
|
> output_layer = Softmax(nO, t2v_width, init_W=zero_init)
|
|
|
|
|
> softmax = with_array(output_layer)
|
|
|
|
|
> model = chain(tok2vec, softmax)
|
|
|
|
|
> model.set_ref("tok2vec", tok2vec)
|
|
|
|
|
> model.set_ref("softmax", output_layer)
|
|
|
|
|
> model.set_ref("output_layer", output_layer)
|
|
|
|
|
> return model
|
|
|
|
|
> ```
|
|
|
|
|
|
2020-08-21 17:11:38 +03:00
|
|
|
|
The Thinc `Model` class is a **generic type** that can specify its input and
|
|
|
|
|
output types. Python uses a square-bracket notation for this, so the type
|
|
|
|
|
~~Model[List, Dict]~~ says that each batch of inputs to the model will be a
|
|
|
|
|
list, and the outputs will be a dictionary. Both `typing.List` and `typing.Dict`
|
|
|
|
|
are also generics, allowing you to be more specific about the data. For
|
|
|
|
|
instance, you can write ~~Model[List[Doc], Dict[str, float]]~~ to specify that
|
|
|
|
|
the model expects a list of [`Doc`](/api/doc) objects as input, and returns a
|
|
|
|
|
dictionary mapping strings to floats. Some of the most common types you'll see
|
|
|
|
|
are:
|
|
|
|
|
|
|
|
|
|
| Type | Description |
|
|
|
|
|
| ------------------ | ---------------------------------------------------------------------------------------------------- |
|
|
|
|
|
| ~~List[Doc]~~ | A batch of [`Doc`](/api/doc) objects. Most components expect their models to take this as input. |
|
|
|
|
|
| ~~Floats2d~~ | A two-dimensional `numpy` or `cupy` array of floats. Usually 32-bit. |
|
|
|
|
|
| ~~Ints2d~~ | A two-dimensional `numpy` or `cupy` array of integers. Common dtypes include uint64, int32 and int8. |
|
|
|
|
|
| ~~List[Floats2d]~~ | A list of two-dimensional arrays, generally with one array per `Doc` and one row per token. |
|
|
|
|
|
| ~~Ragged~~ | A container to handle variable-length sequence data in an unpadded contiguous array. |
|
|
|
|
|
| ~~Padded~~ | A container to handle variable-length sequence data in a passed contiguous array. |
|
|
|
|
|
|
2020-08-21 20:34:06 +03:00
|
|
|
|
The model type signatures help you figure out which model architectures and
|
|
|
|
|
components can **fit together**. For instance, the
|
2020-08-21 17:21:55 +03:00
|
|
|
|
[`TextCategorizer`](/api/textcategorizer) class expects a model typed
|
2020-08-21 17:11:38 +03:00
|
|
|
|
~~Model[List[Doc], Floats2d]~~, because the model will predict one row of
|
2020-08-21 20:34:06 +03:00
|
|
|
|
category probabilities per [`Doc`](/api/doc). In contrast, the
|
|
|
|
|
[`Tagger`](/api/tagger) class expects a model typed ~~Model[List[Doc],
|
|
|
|
|
List[Floats2d]]~~, because it needs to predict one row of probabilities per
|
|
|
|
|
token.
|
|
|
|
|
|
|
|
|
|
There's no guarantee that two models with the same type signature can be used
|
|
|
|
|
interchangeably. There are many other ways they could be incompatible. However,
|
|
|
|
|
if the types don't match, they almost surely _won't_ be compatible. This little
|
|
|
|
|
bit of validation goes a long way, especially if you
|
|
|
|
|
[configure your editor](https://thinc.ai/docs/usage-type-checking) or other
|
|
|
|
|
tools to highlight these errors early. Thinc will also verify that your types
|
|
|
|
|
match correctly when your config file is processed at the beginning of training.
|
2020-08-21 17:11:38 +03:00
|
|
|
|
|
2020-08-21 21:02:18 +03:00
|
|
|
|
<Infobox title="Tip: Static type checking in your editor" emoji="💡">
|
|
|
|
|
|
|
|
|
|
If you're using a modern editor like Visual Studio Code, you can
|
|
|
|
|
[set up `mypy`](https://thinc.ai/docs/usage-type-checking#install) with the
|
|
|
|
|
custom Thinc plugin and get live feedback about mismatched types as you write
|
|
|
|
|
code.
|
|
|
|
|
|
|
|
|
|
[![](../images/thinc_mypy.jpg)](https://thinc.ai/docs/usage-type-checking#linting)
|
|
|
|
|
|
|
|
|
|
</Infobox>
|
|
|
|
|
|
2020-08-21 17:11:38 +03:00
|
|
|
|
## Defining sublayers {#sublayers}
|
|
|
|
|
|
2020-08-21 20:34:06 +03:00
|
|
|
|
Model architecture functions often accept **sublayers as arguments**, so that
|
|
|
|
|
you can try **substituting a different layer** into the network. Depending on
|
|
|
|
|
how the architecture function is structured, you might be able to define your
|
|
|
|
|
network structure entirely through the [config system](/usage/training#config),
|
|
|
|
|
using layers that have already been defined. The
|
2020-08-21 17:11:38 +03:00
|
|
|
|
[transformers documentation](/usage/embeddings-transformers#transformers)
|
2020-08-21 20:34:06 +03:00
|
|
|
|
section shows a common example of swapping in a different sublayer.
|
|
|
|
|
|
|
|
|
|
In most neural network models for NLP, the most important parts of the network
|
|
|
|
|
are what we refer to as the
|
2020-08-21 17:11:38 +03:00
|
|
|
|
[embed and encode](https://explosion.ai/blog/embed-encode-attend-predict) steps.
|
|
|
|
|
These steps together compute dense, context-sensitive representations of the
|
2020-08-21 20:34:06 +03:00
|
|
|
|
tokens. Most of spaCy's default architectures accept a
|
|
|
|
|
[`tok2vec` embedding layer](/api/architectures#tok2vec-arch) as an argument, so
|
|
|
|
|
you can control this important part of the network separately. This makes it
|
|
|
|
|
easy to **switch between** transformer, CNN, BiLSTM or other feature extraction
|
|
|
|
|
approaches. And if you want to define your own solution, all you need to do is
|
|
|
|
|
register a ~~Model[List[Doc], List[Floats2d]]~~ architecture function, and
|
|
|
|
|
you'll be able to try it out in any of spaCy components.
|
|
|
|
|
|
|
|
|
|
<!-- TODO: example of switching sublayers -->
|
2020-08-21 17:11:38 +03:00
|
|
|
|
|
|
|
|
|
### Registering new architectures
|
|
|
|
|
|
|
|
|
|
- Recap concept, link to config docs.
|
|
|
|
|
|
|
|
|
|
## Wrapping PyTorch, TensorFlow and other frameworks {#frameworks}
|
|
|
|
|
|
2020-08-21 21:02:18 +03:00
|
|
|
|
<!-- TODO: this is copied over from the Thinc docs and we probably want to shorten it and make it more spaCy-specific -->
|
|
|
|
|
|
|
|
|
|
Thinc allows you to wrap models written in other machine learning frameworks
|
|
|
|
|
like PyTorch, TensorFlow and MXNet using a unified
|
|
|
|
|
[`Model`](https://thinc.ai/docs/api-model) API. As well as **wrapping whole
|
|
|
|
|
models**, Thinc lets you call into an external framework for just **part of your
|
|
|
|
|
model**: you can have a model where you use PyTorch just for the transformer
|
|
|
|
|
layers, using "native" Thinc layers to do fiddly input and output
|
|
|
|
|
transformations and add on task-specific "heads", as efficiency is less of a
|
|
|
|
|
consideration for those parts of the network.
|
|
|
|
|
|
|
|
|
|
Thinc uses a special class, [`Shim`](https://thinc.ai/docs/api-model#shim), to
|
|
|
|
|
hold references to external objects. This allows each wrapper space to define a
|
|
|
|
|
custom type, with whatever attributes and methods are helpful, to assist in
|
|
|
|
|
managing the communication between Thinc and the external library. The
|
|
|
|
|
[`Model`](/docs/api-model#model) class holds `shim` instances in a separate
|
|
|
|
|
list, and communicates with the shims about updates, serialization, changes of
|
|
|
|
|
device, etc.
|
|
|
|
|
|
|
|
|
|
The wrapper will receive each batch of inputs, convert them into a suitable form
|
|
|
|
|
for the underlying model instance, and pass them over to the shim, which will
|
|
|
|
|
**manage the actual communication** with the model. The output is then passed
|
|
|
|
|
back into the wrapper, and converted for use in the rest of the network. The
|
|
|
|
|
equivalent procedure happens during backpropagation. Array conversion is handled
|
|
|
|
|
via the [DLPack](https://github.com/dmlc/dlpack) standard wherever possible, so
|
|
|
|
|
that data can be passed between the frameworks **without copying the data back**
|
|
|
|
|
to the host device unnecessarily.
|
|
|
|
|
|
|
|
|
|
| Framework | Wrapper layer | Shim | DLPack |
|
|
|
|
|
| -------------- | ------------------------------------------------------------------------- | --------------------------------------------------------- | --------------- |
|
|
|
|
|
| **PyTorch** | [`PyTorchWrapper`](https://thinc.ai/docs/api-layers#pytorchwrapper) | [`PyTorchShim`](https://thinc.ai/docs/api-model#shims) | ✅ |
|
|
|
|
|
| **TensorFlow** | [`TensorFlowWrapper`](https://thinc.ai/docs/api-layers#tensorflowwrapper) | [`TensorFlowShim`](https://thinc.ai/docs/api-model#shims) | ❌ <sup>1</sup> |
|
|
|
|
|
| **MXNet** | [`MXNetWrapper`](https://thinc.ai/docs/api-layers#mxnetwrapper) | [`MXNetShim`](https://thinc.ai/docs/api-model#shims) | ✅ |
|
|
|
|
|
|
|
|
|
|
1. DLPack support in TensorFlow is now
|
|
|
|
|
[available](<(https://github.com/tensorflow/tensorflow/issues/24453)>) but
|
|
|
|
|
still experimental.
|
|
|
|
|
|
|
|
|
|
<!-- TODO:
|
2020-08-21 17:11:38 +03:00
|
|
|
|
- Explain concept
|
|
|
|
|
- Link off to notebook
|
2020-08-21 21:02:18 +03:00
|
|
|
|
-->
|
2020-08-21 17:11:38 +03:00
|
|
|
|
|
|
|
|
|
## Models for trainable components {#components}
|
|
|
|
|
|
|
|
|
|
- Interaction with `predict`, `get_loss` and `set_annotations`
|
|
|
|
|
- Initialization life-cycle with `begin_training`.
|
|
|
|
|
- Link to relation extraction notebook.
|