2020-07-22 14:42:59 +03:00
|
|
|
# cython: infer_types=True, profile=True, binding=True
|
|
|
|
import srsly
|
|
|
|
|
|
|
|
from ..tokens.doc cimport Doc
|
|
|
|
|
2020-07-28 23:17:47 +03:00
|
|
|
from ..util import create_default_optimizer
|
2020-07-22 14:42:59 +03:00
|
|
|
from ..errors import Errors
|
|
|
|
from .. import util
|
|
|
|
|
|
|
|
|
|
|
|
class Pipe:
|
2020-07-28 14:37:31 +03:00
|
|
|
"""This class is a base class and not instantiated directly. Trainable
|
|
|
|
pipeline components like the EntityRecognizer or TextCategorizer inherit
|
|
|
|
from it and it defines the interface that components should follow to
|
|
|
|
function as trainable components in a spaCy pipeline.
|
|
|
|
|
|
|
|
DOCS: https://spacy.io/api/pipe
|
2020-07-22 14:42:59 +03:00
|
|
|
"""
|
|
|
|
|
|
|
|
name = None
|
|
|
|
|
2020-07-27 19:11:45 +03:00
|
|
|
def __init__(self, vocab, model, name, **cfg):
|
2020-07-28 14:37:31 +03:00
|
|
|
"""Initialize a pipeline component.
|
|
|
|
|
|
|
|
vocab (Vocab): The shared vocabulary.
|
|
|
|
model (thinc.api.Model): The Thinc Model powering the pipeline component.
|
|
|
|
name (str): The component instance name.
|
|
|
|
**cfg: Additonal settings and config parameters.
|
|
|
|
|
|
|
|
DOCS: https://spacy.io/api/pipe#init
|
|
|
|
"""
|
2020-07-22 14:42:59 +03:00
|
|
|
raise NotImplementedError
|
|
|
|
|
|
|
|
def __call__(self, Doc doc):
|
2020-07-28 14:37:31 +03:00
|
|
|
"""Add context-sensitive embeddings to the Doc.tensor attribute.
|
|
|
|
|
|
|
|
docs (Doc): The Doc to preocess.
|
|
|
|
RETURNS (Doc): The processed Doc.
|
2020-07-22 14:42:59 +03:00
|
|
|
|
2020-07-28 14:37:31 +03:00
|
|
|
DOCS: https://spacy.io/api/pipe#call
|
2020-07-22 14:42:59 +03:00
|
|
|
"""
|
|
|
|
scores = self.predict([doc])
|
|
|
|
self.set_annotations([doc], scores)
|
|
|
|
return doc
|
|
|
|
|
2020-07-28 14:37:31 +03:00
|
|
|
def pipe(self, stream, *, batch_size=128):
|
|
|
|
"""Apply the pipe to a stream of documents. This usually happens under
|
|
|
|
the hood when the nlp object is called on a text and all components are
|
|
|
|
applied to the Doc.
|
|
|
|
|
|
|
|
stream (Iterable[Doc]): A stream of documents.
|
|
|
|
batch_size (int): The number of documents to buffer.
|
|
|
|
YIELDS (Doc): Processed documents in order.
|
2020-07-22 14:42:59 +03:00
|
|
|
|
2020-07-28 14:37:31 +03:00
|
|
|
DOCS: https://spacy.io/api/pipe#pipe
|
2020-07-22 14:42:59 +03:00
|
|
|
"""
|
|
|
|
for docs in util.minibatch(stream, size=batch_size):
|
|
|
|
scores = self.predict(docs)
|
|
|
|
self.set_annotations(docs, scores)
|
|
|
|
yield from docs
|
|
|
|
|
|
|
|
def predict(self, docs):
|
2020-07-28 14:37:31 +03:00
|
|
|
"""Apply the pipeline's model to a batch of docs, without modifying them.
|
|
|
|
Returns a single tensor for a batch of documents.
|
|
|
|
|
|
|
|
docs (Iterable[Doc]): The documents to predict.
|
|
|
|
RETURNS: Vector representations for each token in the documents.
|
|
|
|
|
|
|
|
DOCS: https://spacy.io/api/pipe#predict
|
2020-07-22 14:42:59 +03:00
|
|
|
"""
|
|
|
|
raise NotImplementedError
|
|
|
|
|
|
|
|
def set_annotations(self, docs, scores):
|
2020-07-28 14:37:31 +03:00
|
|
|
"""Modify a batch of documents, using pre-computed scores.
|
|
|
|
|
|
|
|
docs (Iterable[Doc]): The documents to modify.
|
|
|
|
tokvecses: The tensors to set, produced by Pipe.predict.
|
|
|
|
|
|
|
|
DOCS: https://spacy.io/api/pipe#predict
|
|
|
|
"""
|
2020-07-22 14:42:59 +03:00
|
|
|
raise NotImplementedError
|
|
|
|
|
2020-07-28 14:37:31 +03:00
|
|
|
def rehearse(self, examples, *, sgd=None, losses=None, **config):
|
|
|
|
"""Perform a "rehearsal" update from a batch of data. Rehearsal updates
|
|
|
|
teach the current model to make predictions similar to an initial model,
|
|
|
|
to try to address the "catastrophic forgetting" problem. This feature is
|
|
|
|
experimental.
|
|
|
|
|
|
|
|
examples (Iterable[Example]): A batch of Example objects.
|
|
|
|
drop (float): The dropout rate.
|
|
|
|
sgd (thinc.api.Optimizer): The optimizer.
|
|
|
|
losses (Dict[str, float]): Optional record of the loss during training.
|
|
|
|
Updated using the component name as the key.
|
|
|
|
RETURNS (Dict[str, float]): The updated losses dictionary.
|
|
|
|
|
|
|
|
DOCS: https://spacy.io/api/pipe#rehearse
|
|
|
|
"""
|
2020-07-22 14:42:59 +03:00
|
|
|
pass
|
|
|
|
|
|
|
|
def get_loss(self, examples, scores):
|
2020-07-28 14:37:31 +03:00
|
|
|
"""Find the loss and gradient of loss for the batch of documents and
|
|
|
|
their predicted scores.
|
|
|
|
|
|
|
|
examples (Iterable[Examples]): The batch of examples.
|
|
|
|
scores: Scores representing the model's predictions.
|
|
|
|
RETUTNRS (Tuple[float, float]): The loss and the gradient.
|
|
|
|
|
|
|
|
DOCS: https://spacy.io/api/pipe#get_loss
|
|
|
|
"""
|
2020-07-22 14:42:59 +03:00
|
|
|
raise NotImplementedError
|
|
|
|
|
|
|
|
def add_label(self, label):
|
2020-07-28 14:37:31 +03:00
|
|
|
"""Add an output label, to be predicted by the model. It's possible to
|
|
|
|
extend pretrained models with new labels, but care should be taken to
|
|
|
|
avoid the "catastrophic forgetting" problem.
|
|
|
|
|
|
|
|
label (str): The label to add.
|
|
|
|
RETURNS (int): 0 if label is already present, otherwise 1.
|
2020-07-22 14:42:59 +03:00
|
|
|
|
2020-07-28 14:37:31 +03:00
|
|
|
DOCS: https://spacy.io/api/pipe#add_label
|
2020-07-22 14:42:59 +03:00
|
|
|
"""
|
|
|
|
raise NotImplementedError
|
|
|
|
|
|
|
|
def create_optimizer(self):
|
2020-07-28 14:37:31 +03:00
|
|
|
"""Create an optimizer for the pipeline component.
|
|
|
|
|
|
|
|
RETURNS (thinc.api.Optimizer): The optimizer.
|
|
|
|
|
|
|
|
DOCS: https://spacy.io/api/pipe#create_optimizer
|
|
|
|
"""
|
2020-07-22 14:42:59 +03:00
|
|
|
return create_default_optimizer()
|
|
|
|
|
2020-07-27 19:11:45 +03:00
|
|
|
def begin_training(self, get_examples=lambda: [], *, pipeline=None, sgd=None):
|
2020-07-28 14:37:31 +03:00
|
|
|
"""Initialize the pipe for training, using data examples if available.
|
|
|
|
|
|
|
|
get_examples (Callable[[], Iterable[Example]]): Optional function that
|
|
|
|
returns gold-standard Example objects.
|
|
|
|
pipeline (List[Tuple[str, Callable]]): Optional list of pipeline
|
|
|
|
components that this component is part of. Corresponds to
|
|
|
|
nlp.pipeline.
|
|
|
|
sgd (thinc.api.Optimizer): Optional optimizer. Will be created with
|
|
|
|
create_optimizer if it doesn't exist.
|
|
|
|
RETURNS (thinc.api.Optimizer): The optimizer.
|
|
|
|
|
|
|
|
DOCS: https://spacy.io/api/pipe#begin_training
|
|
|
|
"""
|
2020-07-22 14:42:59 +03:00
|
|
|
self.model.initialize()
|
|
|
|
if sgd is None:
|
|
|
|
sgd = self.create_optimizer()
|
|
|
|
return sgd
|
|
|
|
|
|
|
|
def set_output(self, nO):
|
|
|
|
if self.model.has_dim("nO") is not False:
|
|
|
|
self.model.set_dim("nO", nO)
|
|
|
|
if self.model.has_ref("output_layer"):
|
|
|
|
self.model.get_ref("output_layer").set_dim("nO", nO)
|
|
|
|
|
|
|
|
def use_params(self, params):
|
2020-07-28 14:37:31 +03:00
|
|
|
"""Modify the pipe's model, to use the given parameter values. At the
|
|
|
|
end of the context, the original parameters are restored.
|
|
|
|
|
|
|
|
params (dict): The parameter values to use in the model.
|
|
|
|
|
|
|
|
DOCS: https://spacy.io/api/pipe#use_params
|
|
|
|
"""
|
2020-07-22 14:42:59 +03:00
|
|
|
with self.model.use_params(params):
|
|
|
|
yield
|
|
|
|
|
Refactor the Scorer to improve flexibility (#5731)
* Refactor the Scorer to improve flexibility
Refactor the `Scorer` to improve flexibility for arbitrary pipeline
components.
* Individual pipeline components provide their own `evaluate` methods
that score a list of `Example`s and return a dictionary of scores
* `Scorer` is initialized either:
* with a provided pipeline containing components to be scored
* with a default pipeline containing the built-in statistical
components (senter, tagger, morphologizer, parser, ner)
* `Scorer.score` evaluates a list of `Example`s and returns a dictionary
of scores referring to the scores provided by the components in the
pipeline
Significant differences:
* `tags_acc` is renamed to `tag_acc` to be consistent with `token_acc`
and the new `morph_acc`, `pos_acc`, and `lemma_acc`
* Scoring is no longer cumulative: `Scorer.score` scores a list of
examples rather than a single example and does not retain any state
about previously scored examples
* PRF values in the returned scores are no longer multiplied by 100
* Add kwargs to Morphologizer.evaluate
* Create generalized scoring methods in Scorer
* Generalized static scoring methods are added to `Scorer`
* Methods require an attribute (either on Token or Doc) that is
used to key the returned scores
Naming differences:
* `uas`, `las`, and `las_per_type` in the scores dict are renamed to
`dep_uas`, `dep_las`, and `dep_las_per_type`
Scoring differences:
* `Doc.sents` is now scored as spans rather than on sentence-initial
token positions so that `Doc.sents` and `Doc.ents` can be scored with
the same method (this lowers scores since a single incorrect sentence
start results in two incorrect spans)
* Simplify / extend hasattr check for eval method
* Add hasattr check to tokenizer scoring
* Simplify to hasattr check for component scoring
* Reset Example alignment if docs are set
Reset the Example alignment if either doc is set in case the
tokenization has changed.
* Add PRF tokenization scoring for tokens as spans
Add PRF scores for tokens as character spans. The scores are:
* token_acc: # correct tokens / # gold tokens
* token_p/r/f: PRF for (token.idx, token.idx + len(token))
* Add docstring to Scorer.score_tokenization
* Rename component.evaluate() to component.score()
* Update Scorer API docs
* Update scoring for positive_label in textcat
* Fix TextCategorizer.score kwargs
* Update Language.evaluate docs
* Update score names in default config
2020-07-25 13:53:02 +03:00
|
|
|
def score(self, examples, **kwargs):
|
2020-07-28 14:37:31 +03:00
|
|
|
"""Score a batch of examples.
|
|
|
|
|
|
|
|
examples (Iterable[Example]): The examples to score.
|
|
|
|
RETURNS (Dict[str, Any]): The scores.
|
|
|
|
|
|
|
|
DOCS: https://spacy.io/api/pipe#score
|
|
|
|
"""
|
Refactor the Scorer to improve flexibility (#5731)
* Refactor the Scorer to improve flexibility
Refactor the `Scorer` to improve flexibility for arbitrary pipeline
components.
* Individual pipeline components provide their own `evaluate` methods
that score a list of `Example`s and return a dictionary of scores
* `Scorer` is initialized either:
* with a provided pipeline containing components to be scored
* with a default pipeline containing the built-in statistical
components (senter, tagger, morphologizer, parser, ner)
* `Scorer.score` evaluates a list of `Example`s and returns a dictionary
of scores referring to the scores provided by the components in the
pipeline
Significant differences:
* `tags_acc` is renamed to `tag_acc` to be consistent with `token_acc`
and the new `morph_acc`, `pos_acc`, and `lemma_acc`
* Scoring is no longer cumulative: `Scorer.score` scores a list of
examples rather than a single example and does not retain any state
about previously scored examples
* PRF values in the returned scores are no longer multiplied by 100
* Add kwargs to Morphologizer.evaluate
* Create generalized scoring methods in Scorer
* Generalized static scoring methods are added to `Scorer`
* Methods require an attribute (either on Token or Doc) that is
used to key the returned scores
Naming differences:
* `uas`, `las`, and `las_per_type` in the scores dict are renamed to
`dep_uas`, `dep_las`, and `dep_las_per_type`
Scoring differences:
* `Doc.sents` is now scored as spans rather than on sentence-initial
token positions so that `Doc.sents` and `Doc.ents` can be scored with
the same method (this lowers scores since a single incorrect sentence
start results in two incorrect spans)
* Simplify / extend hasattr check for eval method
* Add hasattr check to tokenizer scoring
* Simplify to hasattr check for component scoring
* Reset Example alignment if docs are set
Reset the Example alignment if either doc is set in case the
tokenization has changed.
* Add PRF tokenization scoring for tokens as spans
Add PRF scores for tokens as character spans. The scores are:
* token_acc: # correct tokens / # gold tokens
* token_p/r/f: PRF for (token.idx, token.idx + len(token))
* Add docstring to Scorer.score_tokenization
* Rename component.evaluate() to component.score()
* Update Scorer API docs
* Update scoring for positive_label in textcat
* Fix TextCategorizer.score kwargs
* Update Language.evaluate docs
* Update score names in default config
2020-07-25 13:53:02 +03:00
|
|
|
return {}
|
|
|
|
|
2020-07-22 14:42:59 +03:00
|
|
|
def to_bytes(self, exclude=tuple()):
|
|
|
|
"""Serialize the pipe to a bytestring.
|
|
|
|
|
2020-07-28 14:37:31 +03:00
|
|
|
exclude (Iterable[str]): String names of serialization fields to exclude.
|
2020-07-22 14:42:59 +03:00
|
|
|
RETURNS (bytes): The serialized object.
|
2020-07-28 14:37:31 +03:00
|
|
|
|
|
|
|
DOCS: https://spacy.io/api/pipe#to_bytes
|
2020-07-22 14:42:59 +03:00
|
|
|
"""
|
|
|
|
serialize = {}
|
|
|
|
serialize["cfg"] = lambda: srsly.json_dumps(self.cfg)
|
|
|
|
serialize["model"] = self.model.to_bytes
|
|
|
|
if hasattr(self, "vocab"):
|
|
|
|
serialize["vocab"] = self.vocab.to_bytes
|
|
|
|
return util.to_bytes(serialize, exclude)
|
|
|
|
|
|
|
|
def from_bytes(self, bytes_data, exclude=tuple()):
|
2020-07-28 14:37:31 +03:00
|
|
|
"""Load the pipe from a bytestring.
|
|
|
|
|
|
|
|
exclude (Iterable[str]): String names of serialization fields to exclude.
|
|
|
|
RETURNS (Pipe): The loaded object.
|
|
|
|
|
|
|
|
DOCS: https://spacy.io/api/pipe#from_bytes
|
|
|
|
"""
|
2020-07-22 14:42:59 +03:00
|
|
|
|
|
|
|
def load_model(b):
|
|
|
|
try:
|
|
|
|
self.model.from_bytes(b)
|
|
|
|
except AttributeError:
|
|
|
|
raise ValueError(Errors.E149)
|
|
|
|
|
|
|
|
deserialize = {}
|
|
|
|
if hasattr(self, "vocab"):
|
|
|
|
deserialize["vocab"] = lambda b: self.vocab.from_bytes(b)
|
|
|
|
deserialize["cfg"] = lambda b: self.cfg.update(srsly.json_loads(b))
|
|
|
|
deserialize["model"] = load_model
|
|
|
|
util.from_bytes(bytes_data, deserialize, exclude)
|
|
|
|
return self
|
|
|
|
|
|
|
|
def to_disk(self, path, exclude=tuple()):
|
2020-07-28 14:37:31 +03:00
|
|
|
"""Serialize the pipe to disk.
|
|
|
|
|
|
|
|
path (str / Path): Path to a directory.
|
|
|
|
exclude (Iterable[str]): String names of serialization fields to exclude.
|
|
|
|
|
|
|
|
DOCS: https://spacy.io/api/pipe#to_disk
|
|
|
|
"""
|
2020-07-22 14:42:59 +03:00
|
|
|
serialize = {}
|
|
|
|
serialize["cfg"] = lambda p: srsly.write_json(p, self.cfg)
|
|
|
|
serialize["vocab"] = lambda p: self.vocab.to_disk(p)
|
|
|
|
serialize["model"] = lambda p: self.model.to_disk(p)
|
|
|
|
util.to_disk(path, serialize, exclude)
|
|
|
|
|
|
|
|
def from_disk(self, path, exclude=tuple()):
|
2020-07-28 14:37:31 +03:00
|
|
|
"""Load the pipe from disk.
|
|
|
|
|
|
|
|
path (str / Path): Path to a directory.
|
|
|
|
exclude (Iterable[str]): String names of serialization fields to exclude.
|
|
|
|
RETURNS (Pipe): The loaded object.
|
|
|
|
|
|
|
|
DOCS: https://spacy.io/api/pipe#from_disk
|
|
|
|
"""
|
2020-07-22 14:42:59 +03:00
|
|
|
|
|
|
|
def load_model(p):
|
|
|
|
try:
|
|
|
|
self.model.from_bytes(p.open("rb").read())
|
|
|
|
except AttributeError:
|
|
|
|
raise ValueError(Errors.E149)
|
|
|
|
|
|
|
|
deserialize = {}
|
|
|
|
deserialize["vocab"] = lambda p: self.vocab.from_disk(p)
|
|
|
|
deserialize["cfg"] = lambda p: self.cfg.update(deserialize_config(p))
|
|
|
|
deserialize["model"] = load_model
|
|
|
|
util.from_disk(path, deserialize, exclude)
|
|
|
|
return self
|
2020-07-28 14:37:31 +03:00
|
|
|
|
|
|
|
|
|
|
|
def deserialize_config(path):
|
|
|
|
if path.exists():
|
|
|
|
return srsly.read_json(path)
|
|
|
|
else:
|
|
|
|
return {}
|