spaCy/spacy/tests/doc/test_span_merge.py

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# coding: utf-8
2015-03-30 02:37:57 +03:00
from __future__ import unicode_literals
💫 Refactor test suite (#2568) ## Description Related issues: #2379 (should be fixed by separating model tests) * **total execution time down from > 300 seconds to under 60 seconds** 🎉 * removed all model-specific tests that could only really be run manually anyway – those will now live in a separate test suite in the [`spacy-models`](https://github.com/explosion/spacy-models) repository and are already integrated into our new model training infrastructure * changed all relative imports to absolute imports to prepare for moving the test suite from `/spacy/tests` to `/tests` (it'll now always test against the installed version) * merged old regression tests into collections, e.g. `test_issue1001-1500.py` (about 90% of the regression tests are very short anyways) * tidied up and rewrote existing tests wherever possible ### Todo - [ ] move tests to `/tests` and adjust CI commands accordingly - [x] move model test suite from internal repo to `spacy-models` - [x] ~~investigate why `pipeline/test_textcat.py` is flakey~~ - [x] review old regression tests (leftover files) and see if they can be merged, simplified or deleted - [ ] update documentation on how to run tests ### Types of change enhancement, tests ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [ ] My changes don't require a change to the documentation, or if they do, I've added all required information.
2018-07-25 00:38:44 +03:00
from spacy.vocab import Vocab
from spacy.tokens import Doc
💫 Refactor test suite (#2568) ## Description Related issues: #2379 (should be fixed by separating model tests) * **total execution time down from > 300 seconds to under 60 seconds** 🎉 * removed all model-specific tests that could only really be run manually anyway – those will now live in a separate test suite in the [`spacy-models`](https://github.com/explosion/spacy-models) repository and are already integrated into our new model training infrastructure * changed all relative imports to absolute imports to prepare for moving the test suite from `/spacy/tests` to `/tests` (it'll now always test against the installed version) * merged old regression tests into collections, e.g. `test_issue1001-1500.py` (about 90% of the regression tests are very short anyways) * tidied up and rewrote existing tests wherever possible ### Todo - [ ] move tests to `/tests` and adjust CI commands accordingly - [x] move model test suite from internal repo to `spacy-models` - [x] ~~investigate why `pipeline/test_textcat.py` is flakey~~ - [x] review old regression tests (leftover files) and see if they can be merged, simplified or deleted - [ ] update documentation on how to run tests ### Types of change enhancement, tests ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [ ] My changes don't require a change to the documentation, or if they do, I've added all required information.
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from ..util import get_doc
def test_spans_merge_tokens(en_tokenizer):
text = "Los Angeles start."
heads = [1, 1, 0, -1]
tokens = en_tokenizer(text)
💫 Refactor test suite (#2568) ## Description Related issues: #2379 (should be fixed by separating model tests) * **total execution time down from > 300 seconds to under 60 seconds** 🎉 * removed all model-specific tests that could only really be run manually anyway – those will now live in a separate test suite in the [`spacy-models`](https://github.com/explosion/spacy-models) repository and are already integrated into our new model training infrastructure * changed all relative imports to absolute imports to prepare for moving the test suite from `/spacy/tests` to `/tests` (it'll now always test against the installed version) * merged old regression tests into collections, e.g. `test_issue1001-1500.py` (about 90% of the regression tests are very short anyways) * tidied up and rewrote existing tests wherever possible ### Todo - [ ] move tests to `/tests` and adjust CI commands accordingly - [x] move model test suite from internal repo to `spacy-models` - [x] ~~investigate why `pipeline/test_textcat.py` is flakey~~ - [x] review old regression tests (leftover files) and see if they can be merged, simplified or deleted - [ ] update documentation on how to run tests ### Types of change enhancement, tests ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [ ] My changes don't require a change to the documentation, or if they do, I've added all required information.
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doc = get_doc(tokens.vocab, words=[t.text for t in tokens], heads=heads)
assert len(doc) == 4
assert doc[0].head.text == 'Angeles'
assert doc[1].head.text == 'start'
doc.merge(0, len('Los Angeles'), tag='NNP', lemma='Los Angeles', ent_type='GPE')
assert len(doc) == 3
assert doc[0].text == 'Los Angeles'
assert doc[0].head.text == 'start'
💫 Refactor test suite (#2568) ## Description Related issues: #2379 (should be fixed by separating model tests) * **total execution time down from > 300 seconds to under 60 seconds** 🎉 * removed all model-specific tests that could only really be run manually anyway – those will now live in a separate test suite in the [`spacy-models`](https://github.com/explosion/spacy-models) repository and are already integrated into our new model training infrastructure * changed all relative imports to absolute imports to prepare for moving the test suite from `/spacy/tests` to `/tests` (it'll now always test against the installed version) * merged old regression tests into collections, e.g. `test_issue1001-1500.py` (about 90% of the regression tests are very short anyways) * tidied up and rewrote existing tests wherever possible ### Todo - [ ] move tests to `/tests` and adjust CI commands accordingly - [x] move model test suite from internal repo to `spacy-models` - [x] ~~investigate why `pipeline/test_textcat.py` is flakey~~ - [x] review old regression tests (leftover files) and see if they can be merged, simplified or deleted - [ ] update documentation on how to run tests ### Types of change enhancement, tests ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [ ] My changes don't require a change to the documentation, or if they do, I've added all required information.
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doc = get_doc(tokens.vocab, words=[t.text for t in tokens], heads=heads)
assert len(doc) == 4
assert doc[0].head.text == 'Angeles'
assert doc[1].head.text == 'start'
doc.merge(0, len('Los Angeles'), tag='NNP', lemma='Los Angeles', label='GPE')
assert len(doc) == 3
assert doc[0].text == 'Los Angeles'
assert doc[0].head.text == 'start'
assert doc[0].ent_type_ == 'GPE'
def test_spans_merge_heads(en_tokenizer):
text = "I found a pilates class near work."
heads = [1, 0, 2, 1, -3, -1, -1, -6]
tokens = en_tokenizer(text)
💫 Refactor test suite (#2568) ## Description Related issues: #2379 (should be fixed by separating model tests) * **total execution time down from > 300 seconds to under 60 seconds** 🎉 * removed all model-specific tests that could only really be run manually anyway – those will now live in a separate test suite in the [`spacy-models`](https://github.com/explosion/spacy-models) repository and are already integrated into our new model training infrastructure * changed all relative imports to absolute imports to prepare for moving the test suite from `/spacy/tests` to `/tests` (it'll now always test against the installed version) * merged old regression tests into collections, e.g. `test_issue1001-1500.py` (about 90% of the regression tests are very short anyways) * tidied up and rewrote existing tests wherever possible ### Todo - [ ] move tests to `/tests` and adjust CI commands accordingly - [x] move model test suite from internal repo to `spacy-models` - [x] ~~investigate why `pipeline/test_textcat.py` is flakey~~ - [x] review old regression tests (leftover files) and see if they can be merged, simplified or deleted - [ ] update documentation on how to run tests ### Types of change enhancement, tests ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [ ] My changes don't require a change to the documentation, or if they do, I've added all required information.
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doc = get_doc(tokens.vocab, words=[t.text for t in tokens], heads=heads)
assert len(doc) == 8
doc.merge(doc[3].idx, doc[4].idx + len(doc[4]), tag=doc[4].tag_,
lemma='pilates class', ent_type='O')
assert len(doc) == 7
assert doc[0].head.i == 1
assert doc[1].head.i == 1
assert doc[2].head.i == 3
assert doc[3].head.i == 1
assert doc[4].head.i in [1, 3]
assert doc[5].head.i == 4
def test_span_np_merges(en_tokenizer):
text = "displaCy is a parse tool built with Javascript"
heads = [1, 0, 2, 1, -3, -1, -1, -1]
tokens = en_tokenizer(text)
💫 Refactor test suite (#2568) ## Description Related issues: #2379 (should be fixed by separating model tests) * **total execution time down from > 300 seconds to under 60 seconds** 🎉 * removed all model-specific tests that could only really be run manually anyway – those will now live in a separate test suite in the [`spacy-models`](https://github.com/explosion/spacy-models) repository and are already integrated into our new model training infrastructure * changed all relative imports to absolute imports to prepare for moving the test suite from `/spacy/tests` to `/tests` (it'll now always test against the installed version) * merged old regression tests into collections, e.g. `test_issue1001-1500.py` (about 90% of the regression tests are very short anyways) * tidied up and rewrote existing tests wherever possible ### Todo - [ ] move tests to `/tests` and adjust CI commands accordingly - [x] move model test suite from internal repo to `spacy-models` - [x] ~~investigate why `pipeline/test_textcat.py` is flakey~~ - [x] review old regression tests (leftover files) and see if they can be merged, simplified or deleted - [ ] update documentation on how to run tests ### Types of change enhancement, tests ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [ ] My changes don't require a change to the documentation, or if they do, I've added all required information.
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doc = get_doc(tokens.vocab, words=[t.text for t in tokens], heads=heads)
assert doc[4].head.i == 1
doc.merge(doc[2].idx, doc[4].idx + len(doc[4]), tag='NP', lemma='tool',
ent_type='O')
assert doc[2].head.i == 1
text = "displaCy is a lightweight and modern dependency parse tree visualization tool built with CSS3 and JavaScript."
heads = [1, 0, 8, 3, -1, -2, 4, 3, 1, 1, -9, -1, -1, -1, -1, -2, -15]
tokens = en_tokenizer(text)
💫 Refactor test suite (#2568) ## Description Related issues: #2379 (should be fixed by separating model tests) * **total execution time down from > 300 seconds to under 60 seconds** 🎉 * removed all model-specific tests that could only really be run manually anyway – those will now live in a separate test suite in the [`spacy-models`](https://github.com/explosion/spacy-models) repository and are already integrated into our new model training infrastructure * changed all relative imports to absolute imports to prepare for moving the test suite from `/spacy/tests` to `/tests` (it'll now always test against the installed version) * merged old regression tests into collections, e.g. `test_issue1001-1500.py` (about 90% of the regression tests are very short anyways) * tidied up and rewrote existing tests wherever possible ### Todo - [ ] move tests to `/tests` and adjust CI commands accordingly - [x] move model test suite from internal repo to `spacy-models` - [x] ~~investigate why `pipeline/test_textcat.py` is flakey~~ - [x] review old regression tests (leftover files) and see if they can be merged, simplified or deleted - [ ] update documentation on how to run tests ### Types of change enhancement, tests ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [ ] My changes don't require a change to the documentation, or if they do, I've added all required information.
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doc = get_doc(tokens.vocab, words=[t.text for t in tokens], heads=heads)
ents = [(e[0].idx, e[-1].idx + len(e[-1]), e.label_, e.lemma_) for e in doc.ents]
for start, end, label, lemma in ents:
merged = doc.merge(start, end, tag=label, lemma=lemma, ent_type=label)
assert merged != None, (start, end, label, lemma)
text = "One test with entities like New York City so the ents list is not void"
heads = [1, 11, -1, -1, -1, 1, 1, -3, 4, 2, 1, 1, 0, -1, -2]
tokens = en_tokenizer(text)
💫 Refactor test suite (#2568) ## Description Related issues: #2379 (should be fixed by separating model tests) * **total execution time down from > 300 seconds to under 60 seconds** 🎉 * removed all model-specific tests that could only really be run manually anyway – those will now live in a separate test suite in the [`spacy-models`](https://github.com/explosion/spacy-models) repository and are already integrated into our new model training infrastructure * changed all relative imports to absolute imports to prepare for moving the test suite from `/spacy/tests` to `/tests` (it'll now always test against the installed version) * merged old regression tests into collections, e.g. `test_issue1001-1500.py` (about 90% of the regression tests are very short anyways) * tidied up and rewrote existing tests wherever possible ### Todo - [ ] move tests to `/tests` and adjust CI commands accordingly - [x] move model test suite from internal repo to `spacy-models` - [x] ~~investigate why `pipeline/test_textcat.py` is flakey~~ - [x] review old regression tests (leftover files) and see if they can be merged, simplified or deleted - [ ] update documentation on how to run tests ### Types of change enhancement, tests ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [ ] My changes don't require a change to the documentation, or if they do, I've added all required information.
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doc = get_doc(tokens.vocab, words=[t.text for t in tokens], heads=heads)
for span in doc.ents:
merged = doc.merge()
assert merged != None, (span.start, span.end, span.label_, span.lemma_)
def test_spans_entity_merge(en_tokenizer):
text = "Stewart Lee is a stand up comedian who lives in England and loves Joe Pasquale.\n"
heads = [1, 1, 0, 1, 2, -1, -4, 1, -2, -1, -1, -3, -10, 1, -2, -13, -1]
tags = ['NNP', 'NNP', 'VBZ', 'DT', 'VB', 'RP', 'NN', 'WP', 'VBZ', 'IN', 'NNP', 'CC', 'VBZ', 'NNP', 'NNP', '.', 'SP']
💫 Refactor test suite (#2568) ## Description Related issues: #2379 (should be fixed by separating model tests) * **total execution time down from > 300 seconds to under 60 seconds** 🎉 * removed all model-specific tests that could only really be run manually anyway – those will now live in a separate test suite in the [`spacy-models`](https://github.com/explosion/spacy-models) repository and are already integrated into our new model training infrastructure * changed all relative imports to absolute imports to prepare for moving the test suite from `/spacy/tests` to `/tests` (it'll now always test against the installed version) * merged old regression tests into collections, e.g. `test_issue1001-1500.py` (about 90% of the regression tests are very short anyways) * tidied up and rewrote existing tests wherever possible ### Todo - [ ] move tests to `/tests` and adjust CI commands accordingly - [x] move model test suite from internal repo to `spacy-models` - [x] ~~investigate why `pipeline/test_textcat.py` is flakey~~ - [x] review old regression tests (leftover files) and see if they can be merged, simplified or deleted - [ ] update documentation on how to run tests ### Types of change enhancement, tests ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [ ] My changes don't require a change to the documentation, or if they do, I've added all required information.
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ents = [(0, 2, 'PERSON'), (10, 11, 'GPE'), (13, 15, 'PERSON')]
tokens = en_tokenizer(text)
💫 Refactor test suite (#2568) ## Description Related issues: #2379 (should be fixed by separating model tests) * **total execution time down from > 300 seconds to under 60 seconds** 🎉 * removed all model-specific tests that could only really be run manually anyway – those will now live in a separate test suite in the [`spacy-models`](https://github.com/explosion/spacy-models) repository and are already integrated into our new model training infrastructure * changed all relative imports to absolute imports to prepare for moving the test suite from `/spacy/tests` to `/tests` (it'll now always test against the installed version) * merged old regression tests into collections, e.g. `test_issue1001-1500.py` (about 90% of the regression tests are very short anyways) * tidied up and rewrote existing tests wherever possible ### Todo - [ ] move tests to `/tests` and adjust CI commands accordingly - [x] move model test suite from internal repo to `spacy-models` - [x] ~~investigate why `pipeline/test_textcat.py` is flakey~~ - [x] review old regression tests (leftover files) and see if they can be merged, simplified or deleted - [ ] update documentation on how to run tests ### Types of change enhancement, tests ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [ ] My changes don't require a change to the documentation, or if they do, I've added all required information.
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doc = get_doc(tokens.vocab, words=[t.text for t in tokens], heads=heads, tags=tags, ents=ents)
assert len(doc) == 17
for ent in doc.ents:
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label, lemma, type_ = (ent.root.tag_, ent.root.lemma_, max(w.ent_type_ for w in ent))
ent.merge(label=label, lemma=lemma, ent_type=type_)
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# check looping is ok
assert len(doc) == 15
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def test_spans_entity_merge_iob():
# Test entity IOB stays consistent after merging
words = ["a", "b", "c", "d", "e"]
doc = Doc(Vocab(), words=words)
doc.ents = [(doc.vocab.strings.add('ent-abc'), 0, 3),
(doc.vocab.strings.add('ent-d'), 3, 4)]
assert doc[0].ent_iob_ == "B"
assert doc[1].ent_iob_ == "I"
assert doc[2].ent_iob_ == "I"
assert doc[3].ent_iob_ == "B"
doc[0:1].merge()
assert doc[0].ent_iob_ == "B"
assert doc[1].ent_iob_ == "I"
def test_spans_sentence_update_after_merge(en_tokenizer):
text = "Stewart Lee is a stand up comedian. He lives in England and loves Joe Pasquale."
heads = [1, 1, 0, 1, 2, -1, -4, -5, 1, 0, -1, -1, -3, -4, 1, -2, -7]
deps = ['compound', 'nsubj', 'ROOT', 'det', 'amod', 'prt', 'attr',
'punct', 'nsubj', 'ROOT', 'prep', 'pobj', 'cc', 'conj',
'compound', 'dobj', 'punct']
tokens = en_tokenizer(text)
💫 Refactor test suite (#2568) ## Description Related issues: #2379 (should be fixed by separating model tests) * **total execution time down from > 300 seconds to under 60 seconds** 🎉 * removed all model-specific tests that could only really be run manually anyway – those will now live in a separate test suite in the [`spacy-models`](https://github.com/explosion/spacy-models) repository and are already integrated into our new model training infrastructure * changed all relative imports to absolute imports to prepare for moving the test suite from `/spacy/tests` to `/tests` (it'll now always test against the installed version) * merged old regression tests into collections, e.g. `test_issue1001-1500.py` (about 90% of the regression tests are very short anyways) * tidied up and rewrote existing tests wherever possible ### Todo - [ ] move tests to `/tests` and adjust CI commands accordingly - [x] move model test suite from internal repo to `spacy-models` - [x] ~~investigate why `pipeline/test_textcat.py` is flakey~~ - [x] review old regression tests (leftover files) and see if they can be merged, simplified or deleted - [ ] update documentation on how to run tests ### Types of change enhancement, tests ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [ ] My changes don't require a change to the documentation, or if they do, I've added all required information.
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doc = get_doc(tokens.vocab, words=[t.text for t in tokens], heads=heads, deps=deps)
sent1, sent2 = list(doc.sents)
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init_len = len(sent1)
init_len2 = len(sent2)
doc[0:2].merge(label='none', lemma='none', ent_type='none')
doc[-2:].merge(label='none', lemma='none', ent_type='none')
assert len(sent1) == init_len - 1
assert len(sent2) == init_len2 - 1
def test_spans_subtree_size_check(en_tokenizer):
text = "Stewart Lee is a stand up comedian who lives in England and loves Joe Pasquale"
heads = [1, 1, 0, 1, 2, -1, -4, 1, -2, -1, -1, -3, -10, 1, -2]
deps = ['compound', 'nsubj', 'ROOT', 'det', 'amod', 'prt', 'attr',
'nsubj', 'relcl', 'prep', 'pobj', 'cc', 'conj', 'compound',
'dobj']
tokens = en_tokenizer(text)
💫 Refactor test suite (#2568) ## Description Related issues: #2379 (should be fixed by separating model tests) * **total execution time down from > 300 seconds to under 60 seconds** 🎉 * removed all model-specific tests that could only really be run manually anyway – those will now live in a separate test suite in the [`spacy-models`](https://github.com/explosion/spacy-models) repository and are already integrated into our new model training infrastructure * changed all relative imports to absolute imports to prepare for moving the test suite from `/spacy/tests` to `/tests` (it'll now always test against the installed version) * merged old regression tests into collections, e.g. `test_issue1001-1500.py` (about 90% of the regression tests are very short anyways) * tidied up and rewrote existing tests wherever possible ### Todo - [ ] move tests to `/tests` and adjust CI commands accordingly - [x] move model test suite from internal repo to `spacy-models` - [x] ~~investigate why `pipeline/test_textcat.py` is flakey~~ - [x] review old regression tests (leftover files) and see if they can be merged, simplified or deleted - [ ] update documentation on how to run tests ### Types of change enhancement, tests ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [ ] My changes don't require a change to the documentation, or if they do, I've added all required information.
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doc = get_doc(tokens.vocab, words=[t.text for t in tokens], heads=heads, deps=deps)
sent1 = list(doc.sents)[0]
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init_len = len(list(sent1.root.subtree))
doc[0:2].merge(label='none', lemma='none', ent_type='none')
assert len(list(sent1.root.subtree)) == init_len - 1