mirror of
https://github.com/explosion/spaCy.git
synced 2025-08-04 04:10:20 +03:00
Merge branch 'master' into website/migration
This commit is contained in:
commit
ddc9f5612c
|
@ -74,7 +74,7 @@ console_scripts =
|
|||
lookups =
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||||
spacy_lookups_data>=1.0.3,<1.1.0
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transformers =
|
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spacy_transformers>=1.1.2,<1.2.0
|
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spacy_transformers>=1.1.2,<1.3.0
|
||||
ray =
|
||||
spacy_ray>=0.1.0,<1.0.0
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||||
cuda =
|
||||
|
|
|
@ -583,6 +583,10 @@ def setup_gpu(use_gpu: int, silent=None) -> None:
|
|||
|
||||
|
||||
def walk_directory(path: Path, suffix: Optional[str] = None) -> List[Path]:
|
||||
"""Given a directory and a suffix, recursively find all files matching the suffix.
|
||||
Directories or files with names beginning with a . are ignored, but hidden flags on
|
||||
filesystems are not checked.
|
||||
When provided with a suffix `None`, there is no suffix-based filtering."""
|
||||
if not path.is_dir():
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||||
return [path]
|
||||
paths = [path]
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|
|
|
@ -28,6 +28,8 @@ CONVERTERS: Mapping[str, Callable[..., Iterable[Doc]]] = {
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|||
"json": json_to_docs,
|
||||
}
|
||||
|
||||
AUTO = "auto"
|
||||
|
||||
|
||||
# File types that can be written to stdout
|
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FILE_TYPES_STDOUT = ("json",)
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||||
|
@ -49,7 +51,7 @@ def convert_cli(
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|||
model: Optional[str] = Opt(None, "--model", "--base", "-b", help="Trained spaCy pipeline for sentence segmentation to use as base (for --seg-sents)"),
|
||||
morphology: bool = Opt(False, "--morphology", "-m", help="Enable appending morphology to tags"),
|
||||
merge_subtokens: bool = Opt(False, "--merge-subtokens", "-T", help="Merge CoNLL-U subtokens"),
|
||||
converter: str = Opt("auto", "--converter", "-c", help=f"Converter: {tuple(CONVERTERS.keys())}"),
|
||||
converter: str = Opt(AUTO, "--converter", "-c", help=f"Converter: {tuple(CONVERTERS.keys())}"),
|
||||
ner_map: Optional[Path] = Opt(None, "--ner-map", "-nm", help="NER tag mapping (as JSON-encoded dict of entity types)", exists=True),
|
||||
lang: Optional[str] = Opt(None, "--lang", "-l", help="Language (if tokenizer required)"),
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||||
concatenate: bool = Opt(None, "--concatenate", "-C", help="Concatenate output to a single file"),
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||||
|
@ -70,8 +72,8 @@ def convert_cli(
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|||
output_dir: Union[str, Path] = "-" if output_dir == Path("-") else output_dir
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silent = output_dir == "-"
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msg = Printer(no_print=silent)
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verify_cli_args(msg, input_path, output_dir, file_type.value, converter, ner_map)
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converter = _get_converter(msg, converter, input_path)
|
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verify_cli_args(msg, input_path, output_dir, file_type.value, converter, ner_map)
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||||
convert(
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||||
input_path,
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||||
output_dir,
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|
@ -100,7 +102,7 @@ def convert(
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|||
model: Optional[str] = None,
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||||
morphology: bool = False,
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||||
merge_subtokens: bool = False,
|
||||
converter: str = "auto",
|
||||
converter: str,
|
||||
ner_map: Optional[Path] = None,
|
||||
lang: Optional[str] = None,
|
||||
concatenate: bool = False,
|
||||
|
@ -212,18 +214,22 @@ def verify_cli_args(
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|||
input_locs = walk_directory(input_path, converter)
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if len(input_locs) == 0:
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msg.fail("No input files in directory", input_path, exits=1)
|
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file_types = list(set([loc.suffix[1:] for loc in input_locs]))
|
||||
if converter == "auto" and len(file_types) >= 2:
|
||||
file_types_str = ",".join(file_types)
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msg.fail("All input files must be same type", file_types_str, exits=1)
|
||||
if converter != "auto" and converter not in CONVERTERS:
|
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if converter not in CONVERTERS:
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||||
msg.fail(f"Can't find converter for {converter}", exits=1)
|
||||
|
||||
|
||||
def _get_converter(msg, converter, input_path: Path):
|
||||
if input_path.is_dir():
|
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input_path = walk_directory(input_path, converter)[0]
|
||||
if converter == "auto":
|
||||
if converter == AUTO:
|
||||
input_locs = walk_directory(input_path, suffix=None)
|
||||
file_types = list(set([loc.suffix[1:] for loc in input_locs]))
|
||||
if len(file_types) >= 2:
|
||||
file_types_str = ",".join(file_types)
|
||||
msg.fail("All input files must be same type", file_types_str, exits=1)
|
||||
input_path = input_locs[0]
|
||||
else:
|
||||
input_path = walk_directory(input_path, suffix=converter)[0]
|
||||
if converter == AUTO:
|
||||
converter = input_path.suffix[1:]
|
||||
if converter == "ner" or converter == "iob":
|
||||
with input_path.open(encoding="utf8") as file_:
|
||||
|
|
|
@ -11,6 +11,7 @@ from .render import DependencyRenderer, EntityRenderer, SpanRenderer
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|||
from ..tokens import Doc, Span
|
||||
from ..errors import Errors, Warnings
|
||||
from ..util import is_in_jupyter
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from ..util import find_available_port
|
||||
|
||||
|
||||
_html = {}
|
||||
|
@ -82,6 +83,7 @@ def serve(
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|||
manual: bool = False,
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port: int = 5000,
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||||
host: str = "0.0.0.0",
|
||||
auto_select_port: bool = False,
|
||||
) -> None:
|
||||
"""Serve displaCy visualisation.
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||||
|
||||
|
@ -93,15 +95,20 @@ def serve(
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|||
manual (bool): Don't parse `Doc` and instead expect a dict/list of dicts.
|
||||
port (int): Port to serve visualisation.
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host (str): Host to serve visualisation.
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||||
auto_select_port (bool): Automatically select a port if the specified port is in use.
|
||||
|
||||
DOCS: https://spacy.io/api/top-level#displacy.serve
|
||||
USAGE: https://spacy.io/usage/visualizers
|
||||
"""
|
||||
from wsgiref import simple_server
|
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|
||||
port = find_available_port(port, host, auto_select_port)
|
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|
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if is_in_jupyter():
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warnings.warn(Warnings.W011)
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render(docs, style=style, page=page, minify=minify, options=options, manual=manual)
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render(
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docs, style=style, page=page, minify=minify, options=options, manual=manual
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)
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httpd = simple_server.make_server(host, port, app)
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print(f"\nUsing the '{style}' visualizer")
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print(f"Serving on http://{host}:{port} ...\n")
|
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|
|
|
@ -214,6 +214,7 @@ class Warnings(metaclass=ErrorsWithCodes):
|
|||
"is a Cython extension type.")
|
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W123 = ("Argument `enable` with value {enable} does not contain all values specified in the config option "
|
||||
"`enabled` ({enabled}). Be aware that this might affect other components in your pipeline.")
|
||||
W124 = ("{host}:{port} is already in use, using the nearest available port {serve_port} as an alternative.")
|
||||
|
||||
|
||||
class Errors(metaclass=ErrorsWithCodes):
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||||
|
@ -963,6 +964,10 @@ class Errors(metaclass=ErrorsWithCodes):
|
|||
"knowledge base, use `InMemoryLookupKB`.")
|
||||
E1047 = ("`find_threshold()` only supports components with a `scorer` attribute.")
|
||||
E1048 = ("Got '{unexpected}' as console progress bar type, but expected one of the following: {expected}")
|
||||
E1049 = ("No available port found for displaCy on host {host}. Please specify an available port "
|
||||
"with `displacy.serve(doc, port)`")
|
||||
E1050 = ("Port {port} is already in use. Please specify an available port with `displacy.serve(doc, port)` "
|
||||
"or use `auto_switch_port=True` to pick an available port automatically.")
|
||||
|
||||
|
||||
# Deprecated model shortcuts, only used in errors and warnings
|
||||
|
|
|
@ -4,6 +4,8 @@ from libc.stdint cimport int64_t
|
|||
|
||||
from typing import Optional
|
||||
|
||||
from ..util import registry
|
||||
|
||||
|
||||
cdef extern from "polyleven.c":
|
||||
int64_t polyleven(PyObject *o1, PyObject *o2, int64_t k)
|
||||
|
@ -13,3 +15,18 @@ cpdef int64_t levenshtein(a: str, b: str, k: Optional[int] = None):
|
|||
if k is None:
|
||||
k = -1
|
||||
return polyleven(<PyObject*>a, <PyObject*>b, k)
|
||||
|
||||
|
||||
cpdef bint levenshtein_compare(input_text: str, pattern_text: str, fuzzy: int = -1):
|
||||
if fuzzy >= 0:
|
||||
max_edits = fuzzy
|
||||
else:
|
||||
# allow at least two edits (to allow at least one transposition) and up
|
||||
# to 20% of the pattern string length
|
||||
max_edits = max(2, round(0.3 * len(pattern_text)))
|
||||
return levenshtein(input_text, pattern_text, max_edits) <= max_edits
|
||||
|
||||
|
||||
@registry.misc("spacy.levenshtein_compare.v1")
|
||||
def make_levenshtein_compare():
|
||||
return levenshtein_compare
|
||||
|
|
|
@ -77,3 +77,4 @@ cdef class Matcher:
|
|||
cdef public object _extensions
|
||||
cdef public object _extra_predicates
|
||||
cdef public object _seen_attrs
|
||||
cdef public object _fuzzy_compare
|
||||
|
|
|
@ -5,7 +5,8 @@ from ..vocab import Vocab
|
|||
from ..tokens import Doc, Span
|
||||
|
||||
class Matcher:
|
||||
def __init__(self, vocab: Vocab, validate: bool = ...) -> None: ...
|
||||
def __init__(self, vocab: Vocab, validate: bool = ...,
|
||||
fuzzy_compare: Callable[[str, str, int], bool] = ...) -> None: ...
|
||||
def __reduce__(self) -> Any: ...
|
||||
def __len__(self) -> int: ...
|
||||
def __contains__(self, key: str) -> bool: ...
|
||||
|
|
|
@ -1,4 +1,4 @@
|
|||
# cython: infer_types=True, profile=True
|
||||
# cython: binding=True, infer_types=True, profile=True
|
||||
from typing import List, Iterable
|
||||
|
||||
from libcpp.vector cimport vector
|
||||
|
@ -20,10 +20,12 @@ from ..tokens.token cimport Token
|
|||
from ..tokens.morphanalysis cimport MorphAnalysis
|
||||
from ..attrs cimport ID, attr_id_t, NULL_ATTR, ORTH, POS, TAG, DEP, LEMMA, MORPH, ENT_IOB
|
||||
|
||||
from .levenshtein import levenshtein_compare
|
||||
from ..schemas import validate_token_pattern
|
||||
from ..errors import Errors, MatchPatternError, Warnings
|
||||
from ..strings import get_string_id
|
||||
from ..attrs import IDS
|
||||
from ..util import registry
|
||||
|
||||
|
||||
DEF PADDING = 5
|
||||
|
@ -36,11 +38,13 @@ cdef class Matcher:
|
|||
USAGE: https://spacy.io/usage/rule-based-matching
|
||||
"""
|
||||
|
||||
def __init__(self, vocab, validate=True):
|
||||
def __init__(self, vocab, validate=True, *, fuzzy_compare=levenshtein_compare):
|
||||
"""Create the Matcher.
|
||||
|
||||
vocab (Vocab): The vocabulary object, which must be shared with the
|
||||
documents the matcher will operate on.
|
||||
validate (bool): Validate all patterns added to this matcher.
|
||||
fuzzy_compare (Callable[[str, str, int], bool]): The comparison method
|
||||
for the FUZZY operators.
|
||||
"""
|
||||
self._extra_predicates = []
|
||||
self._patterns = {}
|
||||
|
@ -51,9 +55,10 @@ cdef class Matcher:
|
|||
self.vocab = vocab
|
||||
self.mem = Pool()
|
||||
self.validate = validate
|
||||
self._fuzzy_compare = fuzzy_compare
|
||||
|
||||
def __reduce__(self):
|
||||
data = (self.vocab, self._patterns, self._callbacks)
|
||||
data = (self.vocab, self._patterns, self._callbacks, self.validate, self._fuzzy_compare)
|
||||
return (unpickle_matcher, data, None, None)
|
||||
|
||||
def __len__(self):
|
||||
|
@ -128,7 +133,7 @@ cdef class Matcher:
|
|||
for pattern in patterns:
|
||||
try:
|
||||
specs = _preprocess_pattern(pattern, self.vocab,
|
||||
self._extensions, self._extra_predicates)
|
||||
self._extensions, self._extra_predicates, self._fuzzy_compare)
|
||||
self.patterns.push_back(init_pattern(self.mem, key, specs))
|
||||
for spec in specs:
|
||||
for attr, _ in spec[1]:
|
||||
|
@ -326,8 +331,8 @@ cdef class Matcher:
|
|||
return key
|
||||
|
||||
|
||||
def unpickle_matcher(vocab, patterns, callbacks):
|
||||
matcher = Matcher(vocab)
|
||||
def unpickle_matcher(vocab, patterns, callbacks, validate, fuzzy_compare):
|
||||
matcher = Matcher(vocab, validate=validate, fuzzy_compare=fuzzy_compare)
|
||||
for key, pattern in patterns.items():
|
||||
callback = callbacks.get(key, None)
|
||||
matcher.add(key, pattern, on_match=callback)
|
||||
|
@ -754,7 +759,7 @@ cdef attr_t get_ent_id(const TokenPatternC* pattern) nogil:
|
|||
return id_attr.value
|
||||
|
||||
|
||||
def _preprocess_pattern(token_specs, vocab, extensions_table, extra_predicates):
|
||||
def _preprocess_pattern(token_specs, vocab, extensions_table, extra_predicates, fuzzy_compare):
|
||||
"""This function interprets the pattern, converting the various bits of
|
||||
syntactic sugar before we compile it into a struct with init_pattern.
|
||||
|
||||
|
@ -781,7 +786,7 @@ def _preprocess_pattern(token_specs, vocab, extensions_table, extra_predicates):
|
|||
ops = _get_operators(spec)
|
||||
attr_values = _get_attr_values(spec, string_store)
|
||||
extensions = _get_extensions(spec, string_store, extensions_table)
|
||||
predicates = _get_extra_predicates(spec, extra_predicates, vocab)
|
||||
predicates = _get_extra_predicates(spec, extra_predicates, vocab, fuzzy_compare)
|
||||
for op in ops:
|
||||
tokens.append((op, list(attr_values), list(extensions), list(predicates), token_idx))
|
||||
return tokens
|
||||
|
@ -826,16 +831,45 @@ def _get_attr_values(spec, string_store):
|
|||
# These predicate helper classes are used to match the REGEX, IN, >= etc
|
||||
# extensions to the matcher introduced in #3173.
|
||||
|
||||
class _FuzzyPredicate:
|
||||
operators = ("FUZZY", "FUZZY1", "FUZZY2", "FUZZY3", "FUZZY4", "FUZZY5",
|
||||
"FUZZY6", "FUZZY7", "FUZZY8", "FUZZY9")
|
||||
|
||||
def __init__(self, i, attr, value, predicate, is_extension=False, vocab=None,
|
||||
regex=False, fuzzy=None, fuzzy_compare=None):
|
||||
self.i = i
|
||||
self.attr = attr
|
||||
self.value = value
|
||||
self.predicate = predicate
|
||||
self.is_extension = is_extension
|
||||
if self.predicate not in self.operators:
|
||||
raise ValueError(Errors.E126.format(good=self.operators, bad=self.predicate))
|
||||
fuzz = self.predicate[len("FUZZY"):] # number after prefix
|
||||
self.fuzzy = int(fuzz) if fuzz else -1
|
||||
self.fuzzy_compare = fuzzy_compare
|
||||
self.key = (self.attr, self.fuzzy, self.predicate, srsly.json_dumps(value, sort_keys=True))
|
||||
|
||||
def __call__(self, Token token):
|
||||
if self.is_extension:
|
||||
value = token._.get(self.attr)
|
||||
else:
|
||||
value = token.vocab.strings[get_token_attr_for_matcher(token.c, self.attr)]
|
||||
if self.value == value:
|
||||
return True
|
||||
return self.fuzzy_compare(value, self.value, self.fuzzy)
|
||||
|
||||
|
||||
class _RegexPredicate:
|
||||
operators = ("REGEX",)
|
||||
|
||||
def __init__(self, i, attr, value, predicate, is_extension=False, vocab=None):
|
||||
def __init__(self, i, attr, value, predicate, is_extension=False, vocab=None,
|
||||
regex=False, fuzzy=None, fuzzy_compare=None):
|
||||
self.i = i
|
||||
self.attr = attr
|
||||
self.value = re.compile(value)
|
||||
self.predicate = predicate
|
||||
self.is_extension = is_extension
|
||||
self.key = (attr, self.predicate, srsly.json_dumps(value, sort_keys=True))
|
||||
self.key = (self.attr, self.predicate, srsly.json_dumps(value, sort_keys=True))
|
||||
if self.predicate not in self.operators:
|
||||
raise ValueError(Errors.E126.format(good=self.operators, bad=self.predicate))
|
||||
|
||||
|
@ -850,18 +884,28 @@ class _RegexPredicate:
|
|||
class _SetPredicate:
|
||||
operators = ("IN", "NOT_IN", "IS_SUBSET", "IS_SUPERSET", "INTERSECTS")
|
||||
|
||||
def __init__(self, i, attr, value, predicate, is_extension=False, vocab=None):
|
||||
def __init__(self, i, attr, value, predicate, is_extension=False, vocab=None,
|
||||
regex=False, fuzzy=None, fuzzy_compare=None):
|
||||
self.i = i
|
||||
self.attr = attr
|
||||
self.vocab = vocab
|
||||
self.regex = regex
|
||||
self.fuzzy = fuzzy
|
||||
self.fuzzy_compare = fuzzy_compare
|
||||
if self.attr == MORPH:
|
||||
# normalize morph strings
|
||||
self.value = set(self.vocab.morphology.add(v) for v in value)
|
||||
else:
|
||||
self.value = set(get_string_id(v) for v in value)
|
||||
if self.regex:
|
||||
self.value = set(re.compile(v) for v in value)
|
||||
elif self.fuzzy is not None:
|
||||
# add to string store
|
||||
self.value = set(self.vocab.strings.add(v) for v in value)
|
||||
else:
|
||||
self.value = set(get_string_id(v) for v in value)
|
||||
self.predicate = predicate
|
||||
self.is_extension = is_extension
|
||||
self.key = (attr, self.predicate, srsly.json_dumps(value, sort_keys=True))
|
||||
self.key = (self.attr, self.regex, self.fuzzy, self.predicate, srsly.json_dumps(value, sort_keys=True))
|
||||
if self.predicate not in self.operators:
|
||||
raise ValueError(Errors.E126.format(good=self.operators, bad=self.predicate))
|
||||
|
||||
|
@ -889,9 +933,29 @@ class _SetPredicate:
|
|||
return False
|
||||
|
||||
if self.predicate == "IN":
|
||||
return value in self.value
|
||||
if self.regex:
|
||||
value = self.vocab.strings[value]
|
||||
return any(bool(v.search(value)) for v in self.value)
|
||||
elif self.fuzzy is not None:
|
||||
value = self.vocab.strings[value]
|
||||
return any(self.fuzzy_compare(value, self.vocab.strings[v], self.fuzzy)
|
||||
for v in self.value)
|
||||
elif value in self.value:
|
||||
return True
|
||||
else:
|
||||
return False
|
||||
elif self.predicate == "NOT_IN":
|
||||
return value not in self.value
|
||||
if self.regex:
|
||||
value = self.vocab.strings[value]
|
||||
return not any(bool(v.search(value)) for v in self.value)
|
||||
elif self.fuzzy is not None:
|
||||
value = self.vocab.strings[value]
|
||||
return not any(self.fuzzy_compare(value, self.vocab.strings[v], self.fuzzy)
|
||||
for v in self.value)
|
||||
elif value in self.value:
|
||||
return False
|
||||
else:
|
||||
return True
|
||||
elif self.predicate == "IS_SUBSET":
|
||||
return value <= self.value
|
||||
elif self.predicate == "IS_SUPERSET":
|
||||
|
@ -906,13 +970,14 @@ class _SetPredicate:
|
|||
class _ComparisonPredicate:
|
||||
operators = ("==", "!=", ">=", "<=", ">", "<")
|
||||
|
||||
def __init__(self, i, attr, value, predicate, is_extension=False, vocab=None):
|
||||
def __init__(self, i, attr, value, predicate, is_extension=False, vocab=None,
|
||||
regex=False, fuzzy=None, fuzzy_compare=None):
|
||||
self.i = i
|
||||
self.attr = attr
|
||||
self.value = value
|
||||
self.predicate = predicate
|
||||
self.is_extension = is_extension
|
||||
self.key = (attr, self.predicate, srsly.json_dumps(value, sort_keys=True))
|
||||
self.key = (self.attr, self.predicate, srsly.json_dumps(value, sort_keys=True))
|
||||
if self.predicate not in self.operators:
|
||||
raise ValueError(Errors.E126.format(good=self.operators, bad=self.predicate))
|
||||
|
||||
|
@ -935,7 +1000,7 @@ class _ComparisonPredicate:
|
|||
return value < self.value
|
||||
|
||||
|
||||
def _get_extra_predicates(spec, extra_predicates, vocab):
|
||||
def _get_extra_predicates(spec, extra_predicates, vocab, fuzzy_compare):
|
||||
predicate_types = {
|
||||
"REGEX": _RegexPredicate,
|
||||
"IN": _SetPredicate,
|
||||
|
@ -949,6 +1014,16 @@ def _get_extra_predicates(spec, extra_predicates, vocab):
|
|||
"<=": _ComparisonPredicate,
|
||||
">": _ComparisonPredicate,
|
||||
"<": _ComparisonPredicate,
|
||||
"FUZZY": _FuzzyPredicate,
|
||||
"FUZZY1": _FuzzyPredicate,
|
||||
"FUZZY2": _FuzzyPredicate,
|
||||
"FUZZY3": _FuzzyPredicate,
|
||||
"FUZZY4": _FuzzyPredicate,
|
||||
"FUZZY5": _FuzzyPredicate,
|
||||
"FUZZY6": _FuzzyPredicate,
|
||||
"FUZZY7": _FuzzyPredicate,
|
||||
"FUZZY8": _FuzzyPredicate,
|
||||
"FUZZY9": _FuzzyPredicate,
|
||||
}
|
||||
seen_predicates = {pred.key: pred.i for pred in extra_predicates}
|
||||
output = []
|
||||
|
@ -966,22 +1041,47 @@ def _get_extra_predicates(spec, extra_predicates, vocab):
|
|||
attr = "ORTH"
|
||||
attr = IDS.get(attr.upper())
|
||||
if isinstance(value, dict):
|
||||
processed = False
|
||||
value_with_upper_keys = {k.upper(): v for k, v in value.items()}
|
||||
for type_, cls in predicate_types.items():
|
||||
if type_ in value_with_upper_keys:
|
||||
predicate = cls(len(extra_predicates), attr, value_with_upper_keys[type_], type_, vocab=vocab)
|
||||
# Don't create a redundant predicates.
|
||||
# This helps with efficiency, as we're caching the results.
|
||||
if predicate.key in seen_predicates:
|
||||
output.append(seen_predicates[predicate.key])
|
||||
else:
|
||||
extra_predicates.append(predicate)
|
||||
output.append(predicate.i)
|
||||
seen_predicates[predicate.key] = predicate.i
|
||||
processed = True
|
||||
if not processed:
|
||||
warnings.warn(Warnings.W035.format(pattern=value))
|
||||
output.extend(_get_extra_predicates_dict(attr, value, vocab, predicate_types,
|
||||
extra_predicates, seen_predicates, fuzzy_compare=fuzzy_compare))
|
||||
return output
|
||||
|
||||
|
||||
def _get_extra_predicates_dict(attr, value_dict, vocab, predicate_types,
|
||||
extra_predicates, seen_predicates, regex=False, fuzzy=None, fuzzy_compare=None):
|
||||
output = []
|
||||
for type_, value in value_dict.items():
|
||||
type_ = type_.upper()
|
||||
cls = predicate_types.get(type_)
|
||||
if cls is None:
|
||||
warnings.warn(Warnings.W035.format(pattern=value_dict))
|
||||
# ignore unrecognized predicate type
|
||||
continue
|
||||
elif cls == _RegexPredicate:
|
||||
if isinstance(value, dict):
|
||||
# add predicates inside regex operator
|
||||
output.extend(_get_extra_predicates_dict(attr, value, vocab, predicate_types,
|
||||
extra_predicates, seen_predicates,
|
||||
regex=True))
|
||||
continue
|
||||
elif cls == _FuzzyPredicate:
|
||||
if isinstance(value, dict):
|
||||
# add predicates inside fuzzy operator
|
||||
fuzz = type_[len("FUZZY"):] # number after prefix
|
||||
fuzzy_val = int(fuzz) if fuzz else -1
|
||||
output.extend(_get_extra_predicates_dict(attr, value, vocab, predicate_types,
|
||||
extra_predicates, seen_predicates,
|
||||
fuzzy=fuzzy_val, fuzzy_compare=fuzzy_compare))
|
||||
continue
|
||||
predicate = cls(len(extra_predicates), attr, value, type_, vocab=vocab,
|
||||
regex=regex, fuzzy=fuzzy, fuzzy_compare=fuzzy_compare)
|
||||
# Don't create redundant predicates.
|
||||
# This helps with efficiency, as we're caching the results.
|
||||
if predicate.key in seen_predicates:
|
||||
output.append(seen_predicates[predicate.key])
|
||||
else:
|
||||
extra_predicates.append(predicate)
|
||||
output.append(predicate.i)
|
||||
seen_predicates[predicate.key] = predicate.i
|
||||
return output
|
||||
|
||||
|
||||
|
|
|
@ -11,6 +11,7 @@ from ..errors import Errors, Warnings
|
|||
from ..util import ensure_path, to_disk, from_disk, SimpleFrozenList, registry
|
||||
from ..tokens import Doc, Span
|
||||
from ..matcher import Matcher, PhraseMatcher
|
||||
from ..matcher.levenshtein import levenshtein_compare
|
||||
from ..scorer import get_ner_prf
|
||||
|
||||
|
||||
|
@ -23,6 +24,7 @@ PatternType = Dict[str, Union[str, List[Dict[str, Any]]]]
|
|||
assigns=["doc.ents", "token.ent_type", "token.ent_iob"],
|
||||
default_config={
|
||||
"phrase_matcher_attr": None,
|
||||
"matcher_fuzzy_compare": {"@misc": "spacy.levenshtein_compare.v1"},
|
||||
"validate": False,
|
||||
"overwrite_ents": False,
|
||||
"ent_id_sep": DEFAULT_ENT_ID_SEP,
|
||||
|
@ -39,6 +41,7 @@ def make_entity_ruler(
|
|||
nlp: Language,
|
||||
name: str,
|
||||
phrase_matcher_attr: Optional[Union[int, str]],
|
||||
matcher_fuzzy_compare: Callable,
|
||||
validate: bool,
|
||||
overwrite_ents: bool,
|
||||
ent_id_sep: str,
|
||||
|
@ -48,6 +51,7 @@ def make_entity_ruler(
|
|||
nlp,
|
||||
name,
|
||||
phrase_matcher_attr=phrase_matcher_attr,
|
||||
matcher_fuzzy_compare=matcher_fuzzy_compare,
|
||||
validate=validate,
|
||||
overwrite_ents=overwrite_ents,
|
||||
ent_id_sep=ent_id_sep,
|
||||
|
@ -81,6 +85,7 @@ class EntityRuler(Pipe):
|
|||
name: str = "entity_ruler",
|
||||
*,
|
||||
phrase_matcher_attr: Optional[Union[int, str]] = None,
|
||||
matcher_fuzzy_compare: Callable = levenshtein_compare,
|
||||
validate: bool = False,
|
||||
overwrite_ents: bool = False,
|
||||
ent_id_sep: str = DEFAULT_ENT_ID_SEP,
|
||||
|
@ -99,7 +104,10 @@ class EntityRuler(Pipe):
|
|||
added. Used to disable the current entity ruler while creating
|
||||
phrase patterns with the nlp object.
|
||||
phrase_matcher_attr (int / str): Token attribute to match on, passed
|
||||
to the internal PhraseMatcher as `attr`
|
||||
to the internal PhraseMatcher as `attr`.
|
||||
matcher_fuzzy_compare (Callable): The fuzzy comparison method for the
|
||||
internal Matcher. Defaults to
|
||||
spacy.matcher.levenshtein.levenshtein_compare.
|
||||
validate (bool): Whether patterns should be validated, passed to
|
||||
Matcher and PhraseMatcher as `validate`
|
||||
patterns (iterable): Optional patterns to load in.
|
||||
|
@ -117,7 +125,10 @@ class EntityRuler(Pipe):
|
|||
self.token_patterns = defaultdict(list) # type: ignore
|
||||
self.phrase_patterns = defaultdict(list) # type: ignore
|
||||
self._validate = validate
|
||||
self.matcher = Matcher(nlp.vocab, validate=validate)
|
||||
self.matcher_fuzzy_compare = matcher_fuzzy_compare
|
||||
self.matcher = Matcher(
|
||||
nlp.vocab, validate=validate, fuzzy_compare=self.matcher_fuzzy_compare
|
||||
)
|
||||
self.phrase_matcher_attr = phrase_matcher_attr
|
||||
self.phrase_matcher = PhraseMatcher(
|
||||
nlp.vocab, attr=self.phrase_matcher_attr, validate=validate
|
||||
|
@ -337,7 +348,11 @@ class EntityRuler(Pipe):
|
|||
self.token_patterns = defaultdict(list)
|
||||
self.phrase_patterns = defaultdict(list)
|
||||
self._ent_ids = defaultdict(tuple)
|
||||
self.matcher = Matcher(self.nlp.vocab, validate=self._validate)
|
||||
self.matcher = Matcher(
|
||||
self.nlp.vocab,
|
||||
validate=self._validate,
|
||||
fuzzy_compare=self.matcher_fuzzy_compare,
|
||||
)
|
||||
self.phrase_matcher = PhraseMatcher(
|
||||
self.nlp.vocab, attr=self.phrase_matcher_attr, validate=self._validate
|
||||
)
|
||||
|
@ -431,7 +446,8 @@ class EntityRuler(Pipe):
|
|||
self.overwrite = cfg.get("overwrite", False)
|
||||
self.phrase_matcher_attr = cfg.get("phrase_matcher_attr", None)
|
||||
self.phrase_matcher = PhraseMatcher(
|
||||
self.nlp.vocab, attr=self.phrase_matcher_attr
|
||||
self.nlp.vocab,
|
||||
attr=self.phrase_matcher_attr,
|
||||
)
|
||||
self.ent_id_sep = cfg.get("ent_id_sep", DEFAULT_ENT_ID_SEP)
|
||||
else:
|
||||
|
|
|
@ -13,6 +13,7 @@ from ..util import ensure_path, SimpleFrozenList, registry
|
|||
from ..tokens import Doc, Span
|
||||
from ..scorer import Scorer
|
||||
from ..matcher import Matcher, PhraseMatcher
|
||||
from ..matcher.levenshtein import levenshtein_compare
|
||||
from .. import util
|
||||
|
||||
PatternType = Dict[str, Union[str, List[Dict[str, Any]]]]
|
||||
|
@ -28,6 +29,7 @@ DEFAULT_SPANS_KEY = "ruler"
|
|||
"overwrite_ents": False,
|
||||
"scorer": {"@scorers": "spacy.entity_ruler_scorer.v1"},
|
||||
"ent_id_sep": "__unused__",
|
||||
"matcher_fuzzy_compare": {"@misc": "spacy.levenshtein_compare.v1"},
|
||||
},
|
||||
default_score_weights={
|
||||
"ents_f": 1.0,
|
||||
|
@ -40,6 +42,7 @@ def make_entity_ruler(
|
|||
nlp: Language,
|
||||
name: str,
|
||||
phrase_matcher_attr: Optional[Union[int, str]],
|
||||
matcher_fuzzy_compare: Callable,
|
||||
validate: bool,
|
||||
overwrite_ents: bool,
|
||||
scorer: Optional[Callable],
|
||||
|
@ -57,6 +60,7 @@ def make_entity_ruler(
|
|||
annotate_ents=True,
|
||||
ents_filter=ents_filter,
|
||||
phrase_matcher_attr=phrase_matcher_attr,
|
||||
matcher_fuzzy_compare=matcher_fuzzy_compare,
|
||||
validate=validate,
|
||||
overwrite=False,
|
||||
scorer=scorer,
|
||||
|
@ -72,6 +76,7 @@ def make_entity_ruler(
|
|||
"annotate_ents": False,
|
||||
"ents_filter": {"@misc": "spacy.first_longest_spans_filter.v1"},
|
||||
"phrase_matcher_attr": None,
|
||||
"matcher_fuzzy_compare": {"@misc": "spacy.levenshtein_compare.v1"},
|
||||
"validate": False,
|
||||
"overwrite": True,
|
||||
"scorer": {
|
||||
|
@ -94,6 +99,7 @@ def make_span_ruler(
|
|||
annotate_ents: bool,
|
||||
ents_filter: Callable[[Iterable[Span], Iterable[Span]], Iterable[Span]],
|
||||
phrase_matcher_attr: Optional[Union[int, str]],
|
||||
matcher_fuzzy_compare: Callable,
|
||||
validate: bool,
|
||||
overwrite: bool,
|
||||
scorer: Optional[Callable],
|
||||
|
@ -106,6 +112,7 @@ def make_span_ruler(
|
|||
annotate_ents=annotate_ents,
|
||||
ents_filter=ents_filter,
|
||||
phrase_matcher_attr=phrase_matcher_attr,
|
||||
matcher_fuzzy_compare=matcher_fuzzy_compare,
|
||||
validate=validate,
|
||||
overwrite=overwrite,
|
||||
scorer=scorer,
|
||||
|
@ -216,6 +223,7 @@ class SpanRuler(Pipe):
|
|||
[Iterable[Span], Iterable[Span]], Iterable[Span]
|
||||
] = util.filter_chain_spans,
|
||||
phrase_matcher_attr: Optional[Union[int, str]] = None,
|
||||
matcher_fuzzy_compare: Callable = levenshtein_compare,
|
||||
validate: bool = False,
|
||||
overwrite: bool = False,
|
||||
scorer: Optional[Callable] = partial(
|
||||
|
@ -246,6 +254,9 @@ class SpanRuler(Pipe):
|
|||
phrase_matcher_attr (Optional[Union[int, str]]): Token attribute to
|
||||
match on, passed to the internal PhraseMatcher as `attr`. Defaults
|
||||
to `None`.
|
||||
matcher_fuzzy_compare (Callable): The fuzzy comparison method for the
|
||||
internal Matcher. Defaults to
|
||||
spacy.matcher.levenshtein.levenshtein_compare.
|
||||
validate (bool): Whether patterns should be validated, passed to
|
||||
Matcher and PhraseMatcher as `validate`.
|
||||
overwrite (bool): Whether to remove any existing spans under this spans
|
||||
|
@ -266,6 +277,7 @@ class SpanRuler(Pipe):
|
|||
self.spans_filter = spans_filter
|
||||
self.ents_filter = ents_filter
|
||||
self.scorer = scorer
|
||||
self.matcher_fuzzy_compare = matcher_fuzzy_compare
|
||||
self._match_label_id_map: Dict[int, Dict[str, str]] = {}
|
||||
self.clear()
|
||||
|
||||
|
@ -451,7 +463,11 @@ class SpanRuler(Pipe):
|
|||
DOCS: https://spacy.io/api/spanruler#clear
|
||||
"""
|
||||
self._patterns: List[PatternType] = []
|
||||
self.matcher: Matcher = Matcher(self.nlp.vocab, validate=self.validate)
|
||||
self.matcher: Matcher = Matcher(
|
||||
self.nlp.vocab,
|
||||
validate=self.validate,
|
||||
fuzzy_compare=self.matcher_fuzzy_compare,
|
||||
)
|
||||
self.phrase_matcher: PhraseMatcher = PhraseMatcher(
|
||||
self.nlp.vocab,
|
||||
attr=self.phrase_matcher_attr,
|
||||
|
|
|
@ -74,7 +74,7 @@ subword_features = true
|
|||
default_config={
|
||||
"threshold": 0.5,
|
||||
"model": DEFAULT_MULTI_TEXTCAT_MODEL,
|
||||
"scorer": {"@scorers": "spacy.textcat_multilabel_scorer.v1"},
|
||||
"scorer": {"@scorers": "spacy.textcat_multilabel_scorer.v2"},
|
||||
},
|
||||
default_score_weights={
|
||||
"cats_score": 1.0,
|
||||
|
@ -120,7 +120,7 @@ def textcat_multilabel_score(examples: Iterable[Example], **kwargs) -> Dict[str,
|
|||
)
|
||||
|
||||
|
||||
@registry.scorers("spacy.textcat_multilabel_scorer.v1")
|
||||
@registry.scorers("spacy.textcat_multilabel_scorer.v2")
|
||||
def make_textcat_multilabel_scorer():
|
||||
return textcat_multilabel_score
|
||||
|
||||
|
|
|
@ -156,12 +156,22 @@ def validate_token_pattern(obj: list) -> List[str]:
|
|||
|
||||
|
||||
class TokenPatternString(BaseModel):
|
||||
REGEX: Optional[StrictStr] = Field(None, alias="regex")
|
||||
REGEX: Optional[Union[StrictStr, "TokenPatternString"]] = Field(None, alias="regex")
|
||||
IN: Optional[List[StrictStr]] = Field(None, alias="in")
|
||||
NOT_IN: Optional[List[StrictStr]] = Field(None, alias="not_in")
|
||||
IS_SUBSET: Optional[List[StrictStr]] = Field(None, alias="is_subset")
|
||||
IS_SUPERSET: Optional[List[StrictStr]] = Field(None, alias="is_superset")
|
||||
INTERSECTS: Optional[List[StrictStr]] = Field(None, alias="intersects")
|
||||
FUZZY: Optional[Union[StrictStr, "TokenPatternString"]] = Field(None, alias="fuzzy")
|
||||
FUZZY1: Optional[Union[StrictStr, "TokenPatternString"]] = Field(None, alias="fuzzy1")
|
||||
FUZZY2: Optional[Union[StrictStr, "TokenPatternString"]] = Field(None, alias="fuzzy2")
|
||||
FUZZY3: Optional[Union[StrictStr, "TokenPatternString"]] = Field(None, alias="fuzzy3")
|
||||
FUZZY4: Optional[Union[StrictStr, "TokenPatternString"]] = Field(None, alias="fuzzy4")
|
||||
FUZZY5: Optional[Union[StrictStr, "TokenPatternString"]] = Field(None, alias="fuzzy5")
|
||||
FUZZY6: Optional[Union[StrictStr, "TokenPatternString"]] = Field(None, alias="fuzzy6")
|
||||
FUZZY7: Optional[Union[StrictStr, "TokenPatternString"]] = Field(None, alias="fuzzy7")
|
||||
FUZZY8: Optional[Union[StrictStr, "TokenPatternString"]] = Field(None, alias="fuzzy8")
|
||||
FUZZY9: Optional[Union[StrictStr, "TokenPatternString"]] = Field(None, alias="fuzzy9")
|
||||
|
||||
class Config:
|
||||
extra = "forbid"
|
||||
|
|
|
@ -174,7 +174,7 @@ class Scorer:
|
|||
prf_score.score_set(pred_spans, gold_spans)
|
||||
if len(acc_score) > 0:
|
||||
return {
|
||||
"token_acc": acc_score.fscore,
|
||||
"token_acc": acc_score.precision,
|
||||
"token_p": prf_score.precision,
|
||||
"token_r": prf_score.recall,
|
||||
"token_f": prf_score.fscore,
|
||||
|
@ -476,14 +476,12 @@ class Scorer:
|
|||
f_per_type = {label: PRFScore() for label in labels}
|
||||
auc_per_type = {label: ROCAUCScore() for label in labels}
|
||||
labels = set(labels)
|
||||
if labels:
|
||||
for eg in examples:
|
||||
labels.update(eg.predicted.cats.keys())
|
||||
labels.update(eg.reference.cats.keys())
|
||||
for example in examples:
|
||||
# Through this loop, None in the gold_cats indicates missing label.
|
||||
pred_cats = getter(example.predicted, attr)
|
||||
pred_cats = {k: v for k, v in pred_cats.items() if k in labels}
|
||||
gold_cats = getter(example.reference, attr)
|
||||
gold_cats = {k: v for k, v in gold_cats.items() if k in labels}
|
||||
|
||||
for label in labels:
|
||||
pred_score = pred_cats.get(label, 0.0)
|
||||
|
|
|
@ -1,5 +1,6 @@
|
|||
import pytest
|
||||
from spacy.matcher import levenshtein
|
||||
from spacy.matcher.levenshtein import levenshtein_compare
|
||||
|
||||
|
||||
# empty string plus 10 random ASCII, 10 random unicode, and 2 random long tests
|
||||
|
@ -42,3 +43,31 @@ from spacy.matcher import levenshtein
|
|||
)
|
||||
def test_levenshtein(dist, a, b):
|
||||
assert levenshtein(a, b) == dist
|
||||
|
||||
|
||||
@pytest.mark.parametrize(
|
||||
"a,b,fuzzy,expected",
|
||||
[
|
||||
("a", "a", 1, True),
|
||||
("a", "a", 0, True),
|
||||
("a", "a", -1, True),
|
||||
("a", "ab", 1, True),
|
||||
("a", "ab", 0, False),
|
||||
("a", "ab", -1, True),
|
||||
("ab", "ac", 1, True),
|
||||
("ab", "ac", -1, True),
|
||||
("abc", "cde", 4, True),
|
||||
("abc", "cde", -1, False),
|
||||
("abcdef", "cdefgh", 4, True),
|
||||
("abcdef", "cdefgh", 3, False),
|
||||
("abcdef", "cdefgh", -1, False), # default (2 for length 6)
|
||||
("abcdefgh", "cdefghijk", 5, True),
|
||||
("abcdefgh", "cdefghijk", 4, False),
|
||||
("abcdefgh", "cdefghijk", -1, False), # default (2)
|
||||
("abcdefgh", "cdefghijkl", 6, True),
|
||||
("abcdefgh", "cdefghijkl", 5, False),
|
||||
("abcdefgh", "cdefghijkl", -1, False), # default (2)
|
||||
],
|
||||
)
|
||||
def test_levenshtein_compare(a, b, fuzzy, expected):
|
||||
assert levenshtein_compare(a, b, fuzzy) == expected
|
||||
|
|
|
@ -118,6 +118,155 @@ def test_matcher_match_multi(matcher):
|
|||
]
|
||||
|
||||
|
||||
@pytest.mark.parametrize(
|
||||
"rules,match_locs",
|
||||
[
|
||||
(
|
||||
{
|
||||
"GoogleNow": [[{"ORTH": {"FUZZY": "Google"}}, {"ORTH": "Now"}]],
|
||||
},
|
||||
[(2, 4)],
|
||||
),
|
||||
(
|
||||
{
|
||||
"Java": [[{"LOWER": {"FUZZY": "java"}}]],
|
||||
},
|
||||
[(5, 6)],
|
||||
),
|
||||
(
|
||||
{
|
||||
"JS": [[{"ORTH": {"FUZZY": "JavaScript"}}]],
|
||||
"GoogleNow": [[{"ORTH": {"FUZZY": "Google"}}, {"ORTH": "Now"}]],
|
||||
"Java": [[{"LOWER": {"FUZZY": "java"}}]],
|
||||
},
|
||||
[(2, 4), (5, 6), (8, 9)],
|
||||
),
|
||||
# only the second pattern matches (check that predicate keys used for
|
||||
# caching don't collide)
|
||||
(
|
||||
{
|
||||
"A": [[{"ORTH": {"FUZZY": "Javascripts"}}]],
|
||||
"B": [[{"ORTH": {"FUZZY5": "Javascripts"}}]],
|
||||
},
|
||||
[(8, 9)],
|
||||
),
|
||||
],
|
||||
)
|
||||
def test_matcher_match_fuzzy(en_vocab, rules, match_locs):
|
||||
words = ["They", "like", "Goggle", "Now", "and", "Jav", "but", "not", "JvvaScrpt"]
|
||||
doc = Doc(en_vocab, words=words)
|
||||
|
||||
matcher = Matcher(en_vocab)
|
||||
for key, patterns in rules.items():
|
||||
matcher.add(key, patterns)
|
||||
assert match_locs == [(start, end) for m_id, start, end in matcher(doc)]
|
||||
|
||||
|
||||
@pytest.mark.parametrize("set_op", ["IN", "NOT_IN"])
|
||||
def test_matcher_match_fuzzy_set_op_longest(en_vocab, set_op):
|
||||
rules = {
|
||||
"GoogleNow": [[{"ORTH": {"FUZZY": {set_op: ["Google", "Now"]}}, "OP": "+"}]]
|
||||
}
|
||||
matcher = Matcher(en_vocab)
|
||||
for key, patterns in rules.items():
|
||||
matcher.add(key, patterns, greedy="LONGEST")
|
||||
|
||||
words = ["They", "like", "Goggle", "Noo"]
|
||||
doc = Doc(en_vocab, words=words)
|
||||
assert len(matcher(doc)) == 1
|
||||
|
||||
|
||||
def test_matcher_match_fuzzy_set_multiple(en_vocab):
|
||||
rules = {
|
||||
"GoogleNow": [
|
||||
[
|
||||
{
|
||||
"ORTH": {"FUZZY": {"IN": ["Google", "Now"]}, "NOT_IN": ["Goggle"]},
|
||||
"OP": "+",
|
||||
}
|
||||
]
|
||||
]
|
||||
}
|
||||
matcher = Matcher(en_vocab)
|
||||
for key, patterns in rules.items():
|
||||
matcher.add(key, patterns, greedy="LONGEST")
|
||||
|
||||
words = ["They", "like", "Goggle", "Noo"]
|
||||
doc = Doc(matcher.vocab, words=words)
|
||||
assert matcher(doc) == [
|
||||
(doc.vocab.strings["GoogleNow"], 3, 4),
|
||||
]
|
||||
|
||||
|
||||
@pytest.mark.parametrize("fuzzyn", range(1, 10))
|
||||
def test_matcher_match_fuzzyn_all_insertions(en_vocab, fuzzyn):
|
||||
matcher = Matcher(en_vocab)
|
||||
matcher.add("GoogleNow", [[{"ORTH": {f"FUZZY{fuzzyn}": "GoogleNow"}}]])
|
||||
# words with increasing edit distance
|
||||
words = ["GoogleNow" + "a" * i for i in range(0, 10)]
|
||||
doc = Doc(en_vocab, words)
|
||||
assert len(matcher(doc)) == fuzzyn + 1
|
||||
|
||||
|
||||
@pytest.mark.parametrize("fuzzyn", range(1, 6))
|
||||
def test_matcher_match_fuzzyn_various_edits(en_vocab, fuzzyn):
|
||||
matcher = Matcher(en_vocab)
|
||||
matcher.add("GoogleNow", [[{"ORTH": {f"FUZZY{fuzzyn}": "GoogleNow"}}]])
|
||||
# words with increasing edit distance of different edit types
|
||||
words = [
|
||||
"GoogleNow",
|
||||
"GoogleNuw",
|
||||
"GoogleNuew",
|
||||
"GoogleNoweee",
|
||||
"GiggleNuw3",
|
||||
"gouggle5New",
|
||||
]
|
||||
doc = Doc(en_vocab, words)
|
||||
assert len(matcher(doc)) == fuzzyn + 1
|
||||
|
||||
|
||||
@pytest.mark.parametrize("greedy", ["FIRST", "LONGEST"])
|
||||
@pytest.mark.parametrize("set_op", ["IN", "NOT_IN"])
|
||||
def test_matcher_match_fuzzyn_set_op_longest(en_vocab, greedy, set_op):
|
||||
rules = {
|
||||
"GoogleNow": [[{"ORTH": {"FUZZY2": {set_op: ["Google", "Now"]}}, "OP": "+"}]]
|
||||
}
|
||||
matcher = Matcher(en_vocab)
|
||||
for key, patterns in rules.items():
|
||||
matcher.add(key, patterns, greedy=greedy)
|
||||
|
||||
words = ["They", "like", "Goggle", "Noo"]
|
||||
doc = Doc(matcher.vocab, words=words)
|
||||
spans = matcher(doc, as_spans=True)
|
||||
assert len(spans) == 1
|
||||
if set_op == "IN":
|
||||
assert spans[0].text == "Goggle Noo"
|
||||
else:
|
||||
assert spans[0].text == "They like"
|
||||
|
||||
|
||||
def test_matcher_match_fuzzyn_set_multiple(en_vocab):
|
||||
rules = {
|
||||
"GoogleNow": [
|
||||
[
|
||||
{
|
||||
"ORTH": {"FUZZY1": {"IN": ["Google", "Now"]}, "NOT_IN": ["Goggle"]},
|
||||
"OP": "+",
|
||||
}
|
||||
]
|
||||
]
|
||||
}
|
||||
matcher = Matcher(en_vocab)
|
||||
for key, patterns in rules.items():
|
||||
matcher.add(key, patterns, greedy="LONGEST")
|
||||
|
||||
words = ["They", "like", "Goggle", "Noo"]
|
||||
doc = Doc(matcher.vocab, words=words)
|
||||
assert matcher(doc) == [
|
||||
(doc.vocab.strings["GoogleNow"], 3, 4),
|
||||
]
|
||||
|
||||
|
||||
def test_matcher_empty_dict(en_vocab):
|
||||
"""Test matcher allows empty token specs, meaning match on any token."""
|
||||
matcher = Matcher(en_vocab)
|
||||
|
@ -437,6 +586,30 @@ def test_matcher_regex(en_vocab):
|
|||
assert len(matches) == 0
|
||||
|
||||
|
||||
def test_matcher_regex_set_in(en_vocab):
|
||||
matcher = Matcher(en_vocab)
|
||||
pattern = [{"ORTH": {"REGEX": {"IN": [r"(?:a)", r"(?:an)"]}}}]
|
||||
matcher.add("A_OR_AN", [pattern])
|
||||
doc = Doc(en_vocab, words=["an", "a", "hi"])
|
||||
matches = matcher(doc)
|
||||
assert len(matches) == 2
|
||||
doc = Doc(en_vocab, words=["bye"])
|
||||
matches = matcher(doc)
|
||||
assert len(matches) == 0
|
||||
|
||||
|
||||
def test_matcher_regex_set_not_in(en_vocab):
|
||||
matcher = Matcher(en_vocab)
|
||||
pattern = [{"ORTH": {"REGEX": {"NOT_IN": [r"(?:a)", r"(?:an)"]}}}]
|
||||
matcher.add("A_OR_AN", [pattern])
|
||||
doc = Doc(en_vocab, words=["an", "a", "hi"])
|
||||
matches = matcher(doc)
|
||||
assert len(matches) == 1
|
||||
doc = Doc(en_vocab, words=["bye"])
|
||||
matches = matcher(doc)
|
||||
assert len(matches) == 1
|
||||
|
||||
|
||||
def test_matcher_regex_shape(en_vocab):
|
||||
matcher = Matcher(en_vocab)
|
||||
pattern = [{"SHAPE": {"REGEX": r"^[^x]+$"}}]
|
||||
|
|
|
@ -382,6 +382,43 @@ def test_entity_ruler_overlapping_spans(nlp, entity_ruler_factory):
|
|||
assert doc.ents[0].label_ == "FOOBAR"
|
||||
|
||||
|
||||
@pytest.mark.parametrize("entity_ruler_factory", ENTITY_RULERS)
|
||||
def test_entity_ruler_fuzzy_pipe(nlp, entity_ruler_factory):
|
||||
ruler = nlp.add_pipe(entity_ruler_factory, name="entity_ruler")
|
||||
patterns = [{"label": "HELLO", "pattern": [{"LOWER": {"FUZZY": "hello"}}]}]
|
||||
ruler.add_patterns(patterns)
|
||||
doc = nlp("helloo")
|
||||
assert len(doc.ents) == 1
|
||||
assert doc.ents[0].label_ == "HELLO"
|
||||
|
||||
|
||||
@pytest.mark.parametrize("entity_ruler_factory", ENTITY_RULERS)
|
||||
def test_entity_ruler_fuzzy(nlp, entity_ruler_factory):
|
||||
ruler = nlp.add_pipe(entity_ruler_factory, name="entity_ruler")
|
||||
patterns = [{"label": "HELLO", "pattern": [{"LOWER": {"FUZZY": "hello"}}]}]
|
||||
ruler.add_patterns(patterns)
|
||||
doc = nlp("helloo")
|
||||
assert len(doc.ents) == 1
|
||||
assert doc.ents[0].label_ == "HELLO"
|
||||
|
||||
|
||||
@pytest.mark.parametrize("entity_ruler_factory", ENTITY_RULERS)
|
||||
def test_entity_ruler_fuzzy_disabled(nlp, entity_ruler_factory):
|
||||
@registry.misc("test_fuzzy_compare_disabled")
|
||||
def make_test_fuzzy_compare_disabled():
|
||||
return lambda x, y, z: False
|
||||
|
||||
ruler = nlp.add_pipe(
|
||||
entity_ruler_factory,
|
||||
name="entity_ruler",
|
||||
config={"matcher_fuzzy_compare": {"@misc": "test_fuzzy_compare_disabled"}},
|
||||
)
|
||||
patterns = [{"label": "HELLO", "pattern": [{"LOWER": {"FUZZY": "hello"}}]}]
|
||||
ruler.add_patterns(patterns)
|
||||
doc = nlp("helloo")
|
||||
assert len(doc.ents) == 0
|
||||
|
||||
|
||||
@pytest.mark.parametrize("n_process", [1, 2])
|
||||
@pytest.mark.parametrize("entity_ruler_factory", ENTITY_RULERS)
|
||||
def test_entity_ruler_multiprocessing(nlp, n_process, entity_ruler_factory):
|
||||
|
|
|
@ -898,7 +898,11 @@ def test_textcat_multi_threshold():
|
|||
|
||||
|
||||
@pytest.mark.parametrize(
|
||||
"component_name,scorer", [("textcat", "spacy.textcat_scorer.v1")]
|
||||
"component_name,scorer",
|
||||
[
|
||||
("textcat", "spacy.textcat_scorer.v1"),
|
||||
("textcat_multilabel", "spacy.textcat_multilabel_scorer.v1"),
|
||||
],
|
||||
)
|
||||
def test_textcat_legacy_scorers(component_name, scorer):
|
||||
"""Check that legacy scorers are registered and produce the expected score
|
||||
|
|
|
@ -4,6 +4,7 @@ from collections import Counter
|
|||
from typing import Tuple, List, Dict, Any
|
||||
import pkg_resources
|
||||
import time
|
||||
from pathlib import Path
|
||||
|
||||
import spacy
|
||||
import numpy
|
||||
|
@ -15,7 +16,7 @@ from thinc.api import Config, ConfigValidationError
|
|||
|
||||
from spacy import about
|
||||
from spacy.cli import info
|
||||
from spacy.cli._util import is_subpath_of, load_project_config
|
||||
from spacy.cli._util import is_subpath_of, load_project_config, walk_directory
|
||||
from spacy.cli._util import parse_config_overrides, string_to_list
|
||||
from spacy.cli._util import substitute_project_variables
|
||||
from spacy.cli._util import validate_project_commands
|
||||
|
@ -1185,3 +1186,26 @@ def test_upload_download_local_file():
|
|||
download_file(remote_file, local_file)
|
||||
with local_file.open(mode="r") as file_:
|
||||
assert file_.read() == content
|
||||
|
||||
|
||||
def test_walk_directory():
|
||||
with make_tempdir() as d:
|
||||
files = [
|
||||
"data1.iob",
|
||||
"data2.iob",
|
||||
"data3.json",
|
||||
"data4.conll",
|
||||
"data5.conll",
|
||||
"data6.conll",
|
||||
"data7.txt",
|
||||
]
|
||||
|
||||
for f in files:
|
||||
Path(d / f).touch()
|
||||
|
||||
assert (len(walk_directory(d))) == 7
|
||||
assert (len(walk_directory(d, suffix=None))) == 7
|
||||
assert (len(walk_directory(d, suffix="json"))) == 1
|
||||
assert (len(walk_directory(d, suffix="iob"))) == 2
|
||||
assert (len(walk_directory(d, suffix="conll"))) == 3
|
||||
assert (len(walk_directory(d, suffix="pdf"))) == 0
|
||||
|
|
33
spacy/tests/test_cli_app.py
Normal file
33
spacy/tests/test_cli_app.py
Normal file
|
@ -0,0 +1,33 @@
|
|||
import os
|
||||
from pathlib import Path
|
||||
from typer.testing import CliRunner
|
||||
|
||||
from spacy.cli._util import app
|
||||
from .util import make_tempdir
|
||||
|
||||
|
||||
def test_convert_auto():
|
||||
with make_tempdir() as d_in, make_tempdir() as d_out:
|
||||
for f in ["data1.iob", "data2.iob", "data3.iob"]:
|
||||
Path(d_in / f).touch()
|
||||
|
||||
# ensure that "automatic" suffix detection works
|
||||
result = CliRunner().invoke(app, ["convert", str(d_in), str(d_out)])
|
||||
assert "Generated output file" in result.stdout
|
||||
out_files = os.listdir(d_out)
|
||||
assert len(out_files) == 3
|
||||
assert "data1.spacy" in out_files
|
||||
assert "data2.spacy" in out_files
|
||||
assert "data3.spacy" in out_files
|
||||
|
||||
|
||||
def test_convert_auto_conflict():
|
||||
with make_tempdir() as d_in, make_tempdir() as d_out:
|
||||
for f in ["data1.iob", "data2.iob", "data3.json"]:
|
||||
Path(d_in / f).touch()
|
||||
|
||||
# ensure that "automatic" suffix detection warns when there are different file types
|
||||
result = CliRunner().invoke(app, ["convert", str(d_in), str(d_out)])
|
||||
assert "All input files must be same type" in result.stdout
|
||||
out_files = os.listdir(d_out)
|
||||
assert len(out_files) == 0
|
|
@ -3,6 +3,7 @@ import logging
|
|||
from unittest import mock
|
||||
import pytest
|
||||
from spacy.language import Language
|
||||
from spacy.scorer import Scorer
|
||||
from spacy.tokens import Doc, Span
|
||||
from spacy.vocab import Vocab
|
||||
from spacy.training import Example
|
||||
|
@ -126,6 +127,112 @@ def test_evaluate_no_pipe(nlp):
|
|||
nlp.evaluate([Example.from_dict(doc, annots)])
|
||||
|
||||
|
||||
def test_evaluate_textcat_multilabel(en_vocab):
|
||||
"""Test that evaluate works with a multilabel textcat pipe."""
|
||||
nlp = Language(en_vocab)
|
||||
textcat_multilabel = nlp.add_pipe("textcat_multilabel")
|
||||
for label in ("FEATURE", "REQUEST", "BUG", "QUESTION"):
|
||||
textcat_multilabel.add_label(label)
|
||||
nlp.initialize()
|
||||
|
||||
annots = {"cats": {"FEATURE": 1.0, "QUESTION": 1.0}}
|
||||
doc = nlp.make_doc("hello world")
|
||||
example = Example.from_dict(doc, annots)
|
||||
scores = nlp.evaluate([example])
|
||||
labels = nlp.get_pipe("textcat_multilabel").labels
|
||||
for label in labels:
|
||||
assert scores["cats_f_per_type"].get(label) is not None
|
||||
for key in example.reference.cats.keys():
|
||||
if key not in labels:
|
||||
assert scores["cats_f_per_type"].get(key) is None
|
||||
|
||||
|
||||
def test_evaluate_multiple_textcat_final(en_vocab):
|
||||
"""Test that evaluate evaluates the final textcat component in a pipeline
|
||||
with more than one textcat or textcat_multilabel."""
|
||||
nlp = Language(en_vocab)
|
||||
textcat = nlp.add_pipe("textcat")
|
||||
for label in ("POSITIVE", "NEGATIVE"):
|
||||
textcat.add_label(label)
|
||||
textcat_multilabel = nlp.add_pipe("textcat_multilabel")
|
||||
for label in ("FEATURE", "REQUEST", "BUG", "QUESTION"):
|
||||
textcat_multilabel.add_label(label)
|
||||
nlp.initialize()
|
||||
|
||||
annots = {
|
||||
"cats": {
|
||||
"POSITIVE": 1.0,
|
||||
"NEGATIVE": 0.0,
|
||||
"FEATURE": 1.0,
|
||||
"QUESTION": 1.0,
|
||||
"POSITIVE": 1.0,
|
||||
"NEGATIVE": 0.0,
|
||||
}
|
||||
}
|
||||
doc = nlp.make_doc("hello world")
|
||||
example = Example.from_dict(doc, annots)
|
||||
scores = nlp.evaluate([example])
|
||||
# get the labels from the final pipe
|
||||
labels = nlp.get_pipe(nlp.pipe_names[-1]).labels
|
||||
for label in labels:
|
||||
assert scores["cats_f_per_type"].get(label) is not None
|
||||
for key in example.reference.cats.keys():
|
||||
if key not in labels:
|
||||
assert scores["cats_f_per_type"].get(key) is None
|
||||
|
||||
|
||||
def test_evaluate_multiple_textcat_separate(en_vocab):
|
||||
"""Test that evaluate can evaluate multiple textcat components separately
|
||||
with custom scorers."""
|
||||
|
||||
def custom_textcat_score(examples, **kwargs):
|
||||
scores = Scorer.score_cats(
|
||||
examples,
|
||||
"cats",
|
||||
multi_label=False,
|
||||
**kwargs,
|
||||
)
|
||||
return {f"custom_{k}": v for k, v in scores.items()}
|
||||
|
||||
@spacy.registry.scorers("test_custom_textcat_scorer")
|
||||
def make_custom_textcat_scorer():
|
||||
return custom_textcat_score
|
||||
|
||||
nlp = Language(en_vocab)
|
||||
textcat = nlp.add_pipe(
|
||||
"textcat",
|
||||
config={"scorer": {"@scorers": "test_custom_textcat_scorer"}},
|
||||
)
|
||||
for label in ("POSITIVE", "NEGATIVE"):
|
||||
textcat.add_label(label)
|
||||
textcat_multilabel = nlp.add_pipe("textcat_multilabel")
|
||||
for label in ("FEATURE", "REQUEST", "BUG", "QUESTION"):
|
||||
textcat_multilabel.add_label(label)
|
||||
nlp.initialize()
|
||||
|
||||
annots = {
|
||||
"cats": {
|
||||
"POSITIVE": 1.0,
|
||||
"NEGATIVE": 0.0,
|
||||
"FEATURE": 1.0,
|
||||
"QUESTION": 1.0,
|
||||
"POSITIVE": 1.0,
|
||||
"NEGATIVE": 0.0,
|
||||
}
|
||||
}
|
||||
doc = nlp.make_doc("hello world")
|
||||
example = Example.from_dict(doc, annots)
|
||||
scores = nlp.evaluate([example])
|
||||
# check custom scores for the textcat pipe
|
||||
assert "custom_cats_f_per_type" in scores
|
||||
labels = nlp.get_pipe("textcat").labels
|
||||
assert set(scores["custom_cats_f_per_type"].keys()) == set(labels)
|
||||
# check default scores for the textcat_multilabel pipe
|
||||
assert "cats_f_per_type" in scores
|
||||
labels = nlp.get_pipe("textcat_multilabel").labels
|
||||
assert set(scores["cats_f_per_type"].keys()) == set(labels)
|
||||
|
||||
|
||||
def vector_modification_pipe(doc):
|
||||
doc.vector += 1
|
||||
return doc
|
||||
|
|
|
@ -8,7 +8,7 @@ from spacy import prefer_gpu, require_gpu, require_cpu
|
|||
from spacy.ml._precomputable_affine import PrecomputableAffine
|
||||
from spacy.ml._precomputable_affine import _backprop_precomputable_affine_padding
|
||||
from spacy.util import dot_to_object, SimpleFrozenList, import_file
|
||||
from spacy.util import to_ternary_int
|
||||
from spacy.util import to_ternary_int, find_available_port
|
||||
from thinc.api import Config, Optimizer, ConfigValidationError
|
||||
from thinc.api import get_current_ops, set_current_ops, NumpyOps, CupyOps, MPSOps
|
||||
from thinc.compat import has_cupy_gpu, has_torch_mps_gpu
|
||||
|
@ -434,3 +434,16 @@ def test_to_ternary_int():
|
|||
assert to_ternary_int(-10) == -1
|
||||
assert to_ternary_int("string") == -1
|
||||
assert to_ternary_int([0, "string"]) == -1
|
||||
|
||||
|
||||
def test_find_available_port():
|
||||
host = "0.0.0.0"
|
||||
port = 5000
|
||||
assert find_available_port(port, host) == port, "Port 5000 isn't free"
|
||||
|
||||
from wsgiref.simple_server import make_server, demo_app
|
||||
|
||||
with make_server(host, port, demo_app) as httpd:
|
||||
with pytest.warns(UserWarning, match="already in use"):
|
||||
found_port = find_available_port(port, host, auto_select=True)
|
||||
assert found_port == port + 1, "Didn't find next port"
|
||||
|
|
|
@ -110,7 +110,7 @@ def test_tokenization(sented_doc):
|
|||
)
|
||||
example.predicted[1].is_sent_start = False
|
||||
scores = scorer.score([example])
|
||||
assert scores["token_acc"] == approx(0.66666666)
|
||||
assert scores["token_acc"] == 0.5
|
||||
assert scores["token_p"] == 0.5
|
||||
assert scores["token_r"] == approx(0.33333333)
|
||||
assert scores["token_f"] == 0.4
|
||||
|
|
|
@ -31,6 +31,7 @@ import shlex
|
|||
import inspect
|
||||
import pkgutil
|
||||
import logging
|
||||
import socket
|
||||
|
||||
try:
|
||||
import cupy.random
|
||||
|
@ -1736,3 +1737,50 @@ def all_equal(iterable):
|
|||
(or if the input is an empty sequence), False otherwise."""
|
||||
g = itertools.groupby(iterable)
|
||||
return next(g, True) and not next(g, False)
|
||||
|
||||
|
||||
def _is_port_in_use(port: int, host: str = "localhost") -> bool:
|
||||
"""Check if 'host:port' is in use. Return True if it is, False otherwise.
|
||||
|
||||
port (int): the port to check
|
||||
host (str): the host to check (default "localhost")
|
||||
RETURNS (bool): Whether 'host:port' is in use.
|
||||
"""
|
||||
s = socket.socket(socket.AF_INET, socket.SOCK_STREAM)
|
||||
try:
|
||||
s.bind((host, port))
|
||||
return False
|
||||
except socket.error:
|
||||
return True
|
||||
finally:
|
||||
s.close()
|
||||
|
||||
|
||||
def find_available_port(start: int, host: str, auto_select: bool = False) -> int:
|
||||
"""Given a starting port and a host, handle finding a port.
|
||||
|
||||
If `auto_select` is False, a busy port will raise an error.
|
||||
|
||||
If `auto_select` is True, the next free higher port will be used.
|
||||
|
||||
start (int): the port to start looking from
|
||||
host (str): the host to find a port on
|
||||
auto_select (bool): whether to automatically select a new port if the given port is busy (default False)
|
||||
RETURNS (int): The port to use.
|
||||
"""
|
||||
if not _is_port_in_use(start, host):
|
||||
return start
|
||||
|
||||
port = start
|
||||
if not auto_select:
|
||||
raise ValueError(Errors.E1050.format(port=port))
|
||||
|
||||
while _is_port_in_use(port, host) and port < 65535:
|
||||
port += 1
|
||||
|
||||
if port == 65535 and _is_port_in_use(port, host):
|
||||
raise ValueError(Errors.E1049.format(host=host))
|
||||
|
||||
# if we get here, the port changed
|
||||
warnings.warn(Warnings.W124.format(host=host, port=start, serve_port=port))
|
||||
return port
|
||||
|
|
|
@ -186,7 +186,7 @@ process that are used when you run [`spacy train`](/api/cli#train).
|
|||
| `accumulate_gradient` | Whether to divide the batch up into substeps. Defaults to `1`. ~~int~~ |
|
||||
| `batcher` | Callable that takes an iterator of [`Doc`](/api/doc) objects and yields batches of `Doc`s. Defaults to [`batch_by_words`](/api/top-level#batch_by_words). ~~Callable[[Iterator[Doc], Iterator[List[Doc]]]]~~ |
|
||||
| `before_to_disk` | Optional callback to modify `nlp` object right before it is saved to disk during and after training. Can be used to remove or reset config values or disable components. Defaults to `null`. ~~Optional[Callable[[Language], Language]]~~ |
|
||||
| `before_update` | Optional callback that is invoked at the start of each training step with the `nlp` object and a `Dict` containing the following entries: `step`, `epoch`. Can be used to make deferred changes to components. Defaults to `null`. ~~Optional[Callable[[Language, Dict[str, Any]], None]]~~ |
|
||||
| `before_update` <Tag variant="new">3.5</Tag> | Optional callback that is invoked at the start of each training step with the `nlp` object and a `Dict` containing the following entries: `step`, `epoch`. Can be used to make deferred changes to components. Defaults to `null`. ~~Optional[Callable[[Language, Dict[str, Any]], None]]~~ |
|
||||
| `dev_corpus` | Dot notation of the config location defining the dev corpus. Defaults to `corpora.dev`. ~~str~~ |
|
||||
| `dropout` | The dropout rate. Defaults to `0.1`. ~~float~~ |
|
||||
| `eval_frequency` | How often to evaluate during training (steps). Defaults to `200`. ~~int~~ |
|
||||
|
|
|
@ -55,13 +55,14 @@ how the component should be configured. You can override its settings via the
|
|||
> nlp.add_pipe("entity_ruler", config=config)
|
||||
> ```
|
||||
|
||||
| Setting | Description |
|
||||
| --------------------- | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
||||
| `phrase_matcher_attr` | Optional attribute name match on for the internal [`PhraseMatcher`](/api/phrasematcher), e.g. `LOWER` to match on the lowercase token text. Defaults to `None`. ~~Optional[Union[int, str]]~~ |
|
||||
| `validate` | Whether patterns should be validated (passed to the `Matcher` and `PhraseMatcher`). Defaults to `False`. ~~bool~~ |
|
||||
| `overwrite_ents` | If existing entities are present, e.g. entities added by the model, overwrite them by matches if necessary. Defaults to `False`. ~~bool~~ |
|
||||
| `ent_id_sep` | Separator used internally for entity IDs. Defaults to `"\|\|"`. ~~str~~ |
|
||||
| `scorer` | The scoring method. Defaults to [`spacy.scorer.get_ner_prf`](/api/scorer#get_ner_prf). ~~Optional[Callable]~~ |
|
||||
| Setting | Description |
|
||||
| ---------------------------------------------------- | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
||||
| `phrase_matcher_attr` | Optional attribute name match on for the internal [`PhraseMatcher`](/api/phrasematcher), e.g. `LOWER` to match on the lowercase token text. Defaults to `None`. ~~Optional[Union[int, str]]~~ |
|
||||
| `matcher_fuzzy_compare` <Tag variant="new">3.5</Tag> | The fuzzy comparison method, passed on to the internal `Matcher`. Defaults to `spacy.matcher.levenshtein.levenshtein_compare`. ~~Callable~~ |
|
||||
| `validate` | Whether patterns should be validated (passed to the `Matcher` and `PhraseMatcher`). Defaults to `False`. ~~bool~~ |
|
||||
| `overwrite_ents` | If existing entities are present, e.g. entities added by the model, overwrite them by matches if necessary. Defaults to `False`. ~~bool~~ |
|
||||
| `ent_id_sep` | Separator used internally for entity IDs. Defaults to `"\|\|"`. ~~str~~ |
|
||||
| `scorer` | The scoring method. Defaults to [`spacy.scorer.get_ner_prf`](/api/scorer#get_ner_prf). ~~Optional[Callable]~~ |
|
||||
|
||||
```python
|
||||
%%GITHUB_SPACY/spacy/pipeline/entityruler.py
|
||||
|
@ -85,16 +86,18 @@ be a token pattern (list) or a phrase pattern (string). For example:
|
|||
> ruler = EntityRuler(nlp, overwrite_ents=True)
|
||||
> ```
|
||||
|
||||
| Name | Description |
|
||||
| --------------------------------- | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
||||
| `nlp` | The shared nlp object to pass the vocab to the matchers and process phrase patterns. ~~Language~~ |
|
||||
| `name` <Tag variant="new">3</Tag> | Instance name of the current pipeline component. Typically passed in automatically from the factory when the component is added. Used to disable the current entity ruler while creating phrase patterns with the nlp object. ~~str~~ |
|
||||
| _keyword-only_ | |
|
||||
| `phrase_matcher_attr` | Optional attribute name match on for the internal [`PhraseMatcher`](/api/phrasematcher), e.g. `LOWER` to match on the lowercase token text. Defaults to `None`. ~~Optional[Union[int, str]]~~ |
|
||||
| `validate` | Whether patterns should be validated, passed to Matcher and PhraseMatcher as `validate`. Defaults to `False`. ~~bool~~ |
|
||||
| `overwrite_ents` | If existing entities are present, e.g. entities added by the model, overwrite them by matches if necessary. Defaults to `False`. ~~bool~~ |
|
||||
| `ent_id_sep` | Separator used internally for entity IDs. Defaults to `"\|\|"`. ~~str~~ |
|
||||
| `patterns` | Optional patterns to load in on initialization. ~~Optional[List[Dict[str, Union[str, List[dict]]]]]~~ |
|
||||
| Name | Description |
|
||||
| ---------------------------------------------------- | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
||||
| `nlp` | The shared nlp object to pass the vocab to the matchers and process phrase patterns. ~~Language~~ |
|
||||
| `name` <Tag variant="new">3</Tag> | Instance name of the current pipeline component. Typically passed in automatically from the factory when the component is added. Used to disable the current entity ruler while creating phrase patterns with the nlp object. ~~str~~ |
|
||||
| _keyword-only_ | |
|
||||
| `phrase_matcher_attr` | Optional attribute name match on for the internal [`PhraseMatcher`](/api/phrasematcher), e.g. `LOWER` to match on the lowercase token text. Defaults to `None`. ~~Optional[Union[int, str]]~~ |
|
||||
| `matcher_fuzzy_compare` <Tag variant="new">3.5</Tag> | The fuzzy comparison method, passed on to the internal `Matcher`. Defaults to `spacy.matcher.levenshtein.levenshtein_compare`. ~~Callable~~ |
|
||||
| `validate` | Whether patterns should be validated, passed to Matcher and PhraseMatcher as `validate`. Defaults to `False`. ~~bool~~ |
|
||||
| `overwrite_ents` | If existing entities are present, e.g. entities added by the model, overwrite them by matches if necessary. Defaults to `False`. ~~bool~~ |
|
||||
| `ent_id_sep` | Separator used internally for entity IDs. Defaults to `"\|\|"`. ~~str~~ |
|
||||
| `patterns` | Optional patterns to load in on initialization. ~~Optional[List[Dict[str, Union[str, List[dict]]]]]~~ |
|
||||
| `scorer` | The scoring method. Defaults to [`spacy.scorer.get_ner_prf`](/api/scorer#get_ner_prf). ~~Optional[Callable]~~ |
|
||||
|
||||
## EntityRuler.initialize {id="initialize",tag="method",version="3"}
|
||||
|
||||
|
|
|
@ -86,14 +86,20 @@ it compares to another value.
|
|||
> ]
|
||||
> ```
|
||||
|
||||
| Attribute | Description |
|
||||
| -------------------------- | -------------------------------------------------------------------------------------------------------- |
|
||||
| `IN` | Attribute value is member of a list. ~~Any~~ |
|
||||
| `NOT_IN` | Attribute value is _not_ member of a list. ~~Any~~ |
|
||||
| `IS_SUBSET` | Attribute value (for `MORPH` or custom list attributes) is a subset of a list. ~~Any~~ |
|
||||
| `IS_SUPERSET` | Attribute value (for `MORPH` or custom list attributes) is a superset of a list. ~~Any~~ |
|
||||
| `INTERSECTS` | Attribute value (for `MORPH` or custom list attribute) has a non-empty intersection with a list. ~~Any~~ |
|
||||
| `==`, `>=`, `<=`, `>`, `<` | Attribute value is equal, greater or equal, smaller or equal, greater or smaller. ~~Union[int, float]~~ |
|
||||
| Attribute | Description |
|
||||
| -------------------------------- | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
||||
| `REGEX` | Attribute value matches the regular expression at any position in the string. ~~Any~~ |
|
||||
| `FUZZY` | Attribute value matches if the `fuzzy_compare` method matches for `(value, pattern, -1)`. The default method allows a Levenshtein edit distance of at least 2 and up to 30% of the pattern string length. ~~Any~~ |
|
||||
| `FUZZY1`, `FUZZY2`, ... `FUZZY9` | Attribute value matches if the `fuzzy_compare` method matches for `(value, pattern, N)`. The default method allows a Levenshtein edit distance of at most N (1-9). ~~Any~~ |
|
||||
| `IN` | Attribute value is member of a list. ~~Any~~ |
|
||||
| `NOT_IN` | Attribute value is _not_ member of a list. ~~Any~~ |
|
||||
| `IS_SUBSET` | Attribute value (for `MORPH` or custom list attributes) is a subset of a list. ~~Any~~ |
|
||||
| `IS_SUPERSET` | Attribute value (for `MORPH` or custom list attributes) is a superset of a list. ~~Any~~ |
|
||||
| `INTERSECTS` | Attribute value (for `MORPH` or custom list attribute) has a non-empty intersection with a list. ~~Any~~ |
|
||||
| `==`, `>=`, `<=`, `>`, `<` | Attribute value is equal, greater or equal, smaller or equal, greater or smaller. ~~Union[int, float]~~ |
|
||||
|
||||
As of spaCy v3.5, `REGEX` and `FUZZY` can be used in combination with `IN` and
|
||||
`NOT_IN`.
|
||||
|
||||
## Matcher.\_\_init\_\_ {id="init",tag="method"}
|
||||
|
||||
|
@ -109,10 +115,11 @@ string where an integer is expected) or unexpected property names.
|
|||
> matcher = Matcher(nlp.vocab)
|
||||
> ```
|
||||
|
||||
| Name | Description |
|
||||
| ---------- | ----------------------------------------------------------------------------------------------------- |
|
||||
| `vocab` | The vocabulary object, which must be shared with the documents the matcher will operate on. ~~Vocab~~ |
|
||||
| `validate` | Validate all patterns added to this matcher. ~~bool~~ |
|
||||
| Name | Description |
|
||||
| --------------- | ----------------------------------------------------------------------------------------------------- |
|
||||
| `vocab` | The vocabulary object, which must be shared with the documents the matcher will operate on. ~~Vocab~~ |
|
||||
| `validate` | Validate all patterns added to this matcher. ~~bool~~ |
|
||||
| `fuzzy_compare` | The comparison method used for the `FUZZY` operators. ~~Callable[[str, str, int], bool]~~ |
|
||||
|
||||
## Matcher.\_\_call\_\_ {id="call",tag="method"}
|
||||
|
||||
|
|
|
@ -76,7 +76,7 @@ core pipeline components, the individual score names start with the `Token` or
|
|||
|
||||
Scores the tokenization:
|
||||
|
||||
- `token_acc`: number of correct tokens / number of gold tokens
|
||||
- `token_acc`: number of correct tokens / number of predicted tokens
|
||||
- `token_p`, `token_r`, `token_f`: precision, recall and F-score for token
|
||||
character spans
|
||||
|
||||
|
|
|
@ -46,16 +46,17 @@ how the component should be configured. You can override its settings via the
|
|||
> nlp.add_pipe("span_ruler", config=config)
|
||||
> ```
|
||||
|
||||
| Setting | Description |
|
||||
| --------------------- | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
||||
| `spans_key` | The spans key to save the spans under. If `None`, no spans are saved. Defaults to `"ruler"`. ~~Optional[str]~~ |
|
||||
| `spans_filter` | The optional method to filter spans before they are assigned to doc.spans. Defaults to `None`. ~~Optional[Callable[[Iterable[Span], Iterable[Span]], List[Span]]]~~ |
|
||||
| `annotate_ents` | Whether to save spans to doc.ents. Defaults to `False`. ~~bool~~ |
|
||||
| `ents_filter` | The method to filter spans before they are assigned to doc.ents. Defaults to `util.filter_chain_spans`. ~~Callable[[Iterable[Span], Iterable[Span]], List[Span]]~~ |
|
||||
| `phrase_matcher_attr` | Token attribute to match on, passed to the internal PhraseMatcher as `attr`. Defaults to `None`. ~~Optional[Union[int, str]]~~ |
|
||||
| `validate` | Whether patterns should be validated, passed to Matcher and PhraseMatcher as `validate`. Defaults to `False`. ~~bool~~ |
|
||||
| `overwrite` | Whether to remove any existing spans under `Doc.spans[spans key]` if `spans_key` is set, or to remove any ents under `Doc.ents` if `annotate_ents` is set. Defaults to `True`. ~~bool~~ |
|
||||
| `scorer` | The scoring method. Defaults to [`Scorer.score_spans`](/api/scorer#score_spans) for `Doc.spans[spans_key]` with overlapping spans allowed. ~~Optional[Callable]~~ |
|
||||
| Setting | Description |
|
||||
| ---------------------------------------------------- | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
||||
| `spans_key` | The spans key to save the spans under. If `None`, no spans are saved. Defaults to `"ruler"`. ~~Optional[str]~~ |
|
||||
| `spans_filter` | The optional method to filter spans before they are assigned to doc.spans. Defaults to `None`. ~~Optional[Callable[[Iterable[Span], Iterable[Span]], List[Span]]]~~ |
|
||||
| `annotate_ents` | Whether to save spans to doc.ents. Defaults to `False`. ~~bool~~ |
|
||||
| `ents_filter` | The method to filter spans before they are assigned to doc.ents. Defaults to `util.filter_chain_spans`. ~~Callable[[Iterable[Span], Iterable[Span]], List[Span]]~~ |
|
||||
| `phrase_matcher_attr` | Token attribute to match on, passed to the internal `PhraseMatcher` as `attr`. Defaults to `None`. ~~Optional[Union[int, str]]~~ |
|
||||
| `matcher_fuzzy_compare` <Tag variant="new">3.5</Tag> | The fuzzy comparison method, passed on to the internal `Matcher`. Defaults to `spacy.matcher.levenshtein.levenshtein_compare`. ~~Callable~~ |
|
||||
| `validate` | Whether patterns should be validated, passed to `Matcher` and `PhraseMatcher` as `validate`. Defaults to `False`. ~~bool~~ |
|
||||
| `overwrite` | Whether to remove any existing spans under `Doc.spans[spans key]` if `spans_key` is set, or to remove any ents under `Doc.ents` if `annotate_ents` is set. Defaults to `True`. ~~bool~~ |
|
||||
| `scorer` | The scoring method. Defaults to [`Scorer.score_spans`](/api/scorer#score_spans) for `Doc.spans[spans_key]` with overlapping spans allowed. ~~Optional[Callable]~~ |
|
||||
|
||||
```python
|
||||
%%GITHUB_SPACY/spacy/pipeline/span_ruler.py
|
||||
|
@ -79,19 +80,20 @@ token pattern (list) or a phrase pattern (string). For example:
|
|||
> ruler = SpanRuler(nlp, overwrite=True)
|
||||
> ```
|
||||
|
||||
| Name | Description |
|
||||
| --------------------- | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
||||
| `nlp` | The shared nlp object to pass the vocab to the matchers and process phrase patterns. ~~Language~~ |
|
||||
| `name` | Instance name of the current pipeline component. Typically passed in automatically from the factory when the component is added. Used to disable the current span ruler while creating phrase patterns with the nlp object. ~~str~~ |
|
||||
| _keyword-only_ | |
|
||||
| `spans_key` | The spans key to save the spans under. If `None`, no spans are saved. Defaults to `"ruler"`. ~~Optional[str]~~ |
|
||||
| `spans_filter` | The optional method to filter spans before they are assigned to doc.spans. Defaults to `None`. ~~Optional[Callable[[Iterable[Span], Iterable[Span]], List[Span]]]~~ |
|
||||
| `annotate_ents` | Whether to save spans to doc.ents. Defaults to `False`. ~~bool~~ |
|
||||
| `ents_filter` | The method to filter spans before they are assigned to doc.ents. Defaults to `util.filter_chain_spans`. ~~Callable[[Iterable[Span], Iterable[Span]], List[Span]]~~ |
|
||||
| `phrase_matcher_attr` | Token attribute to match on, passed to the internal PhraseMatcher as `attr`. Defaults to `None`. ~~Optional[Union[int, str]]~~ |
|
||||
| `validate` | Whether patterns should be validated, passed to Matcher and PhraseMatcher as `validate`. Defaults to `False`. ~~bool~~ |
|
||||
| `overwrite` | Whether to remove any existing spans under `Doc.spans[spans key]` if `spans_key` is set, or to remove any ents under `Doc.ents` if `annotate_ents` is set. Defaults to `True`. ~~bool~~ |
|
||||
| `scorer` | The scoring method. Defaults to [`Scorer.score_spans`](/api/scorer#score_spans) for `Doc.spans[spans_key]` with overlapping spans allowed. ~~Optional[Callable]~~ |
|
||||
| Name | Description |
|
||||
| ---------------------------------------------------- | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
||||
| `nlp` | The shared nlp object to pass the vocab to the matchers and process phrase patterns. ~~Language~~ |
|
||||
| `name` | Instance name of the current pipeline component. Typically passed in automatically from the factory when the component is added. Used to disable the current span ruler while creating phrase patterns with the nlp object. ~~str~~ |
|
||||
| _keyword-only_ | |
|
||||
| `spans_key` | The spans key to save the spans under. If `None`, no spans are saved. Defaults to `"ruler"`. ~~Optional[str]~~ |
|
||||
| `spans_filter` | The optional method to filter spans before they are assigned to doc.spans. Defaults to `None`. ~~Optional[Callable[[Iterable[Span], Iterable[Span]], List[Span]]]~~ |
|
||||
| `annotate_ents` | Whether to save spans to doc.ents. Defaults to `False`. ~~bool~~ |
|
||||
| `ents_filter` | The method to filter spans before they are assigned to doc.ents. Defaults to `util.filter_chain_spans`. ~~Callable[[Iterable[Span], Iterable[Span]], List[Span]]~~ |
|
||||
| `phrase_matcher_attr` | Token attribute to match on, passed to the internal PhraseMatcher as `attr`. Defaults to `None`. ~~Optional[Union[int, str]]~~ |
|
||||
| `matcher_fuzzy_compare` <Tag variant="new">3.5</Tag> | The fuzzy comparison method, passed on to the internal `Matcher`. Defaults to `spacy.matcher.levenshtein.levenshtein_compare`. ~~Callable~~ |
|
||||
| `validate` | Whether patterns should be validated, passed to Matcher and PhraseMatcher as `validate`. Defaults to `False`. ~~bool~~ |
|
||||
| `overwrite` | Whether to remove any existing spans under `Doc.spans[spans key]` if `spans_key` is set, or to remove any ents under `Doc.ents` if `annotate_ents` is set. Defaults to `True`. ~~bool~~ |
|
||||
| `scorer` | The scoring method. Defaults to [`Scorer.score_spans`](/api/scorer#score_spans) for `Doc.spans[spans_key]` with overlapping spans allowed. ~~Optional[Callable]~~ |
|
||||
|
||||
## SpanRuler.initialize {id="initialize",tag="method"}
|
||||
|
||||
|
|
|
@ -236,16 +236,17 @@ browser. Will run a simple web server.
|
|||
> displacy.serve([doc1, doc2], style="dep")
|
||||
> ```
|
||||
|
||||
| Name | Description |
|
||||
| --------- | ----------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
||||
| `docs` | Document(s) or span(s) to visualize. ~~Union[Iterable[Union[Doc, Span]], Doc, Span]~~ |
|
||||
| `style` | Visualization style, `"dep"`, `"ent"` or `"span"` <Tag variant="new">3.3</Tag>. Defaults to `"dep"`. ~~str~~ |
|
||||
| `page` | Render markup as full HTML page. Defaults to `True`. ~~bool~~ |
|
||||
| `minify` | Minify HTML markup. Defaults to `False`. ~~bool~~ |
|
||||
| `options` | [Visualizer-specific options](#displacy_options), e.g. colors. ~~Dict[str, Any]~~ |
|
||||
| `manual` | Don't parse `Doc` and instead expect a dict or list of dicts. [See here](/usage/visualizers#manual-usage) for formats and examples. Defaults to `False`. ~~bool~~ |
|
||||
| `port` | Port to serve visualization. Defaults to `5000`. ~~int~~ |
|
||||
| `host` | Host to serve visualization. Defaults to `"0.0.0.0"`. ~~str~~ |
|
||||
| Name | Description |
|
||||
| ------------------ | ----------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
||||
| `docs` | Document(s) or span(s) to visualize. ~~Union[Iterable[Union[Doc, Span]], Doc, Span]~~ |
|
||||
| `style` | Visualization style, `"dep"`, `"ent"` or `"span"` <Tag variant="new">3.3</Tag>. Defaults to `"dep"`. ~~str~~ |
|
||||
| `page` | Render markup as full HTML page. Defaults to `True`. ~~bool~~ |
|
||||
| `minify` | Minify HTML markup. Defaults to `False`. ~~bool~~ |
|
||||
| `options` | [Visualizer-specific options](#displacy_options), e.g. colors. ~~Dict[str, Any]~~ |
|
||||
| `manual` | Don't parse `Doc` and instead expect a dict or list of dicts. [See here](/usage/visualizers#manual-usage) for formats and examples. Defaults to `False`. ~~bool~~ |
|
||||
| `port` | Port to serve visualization. Defaults to `5000`. ~~int~~ |
|
||||
| `host` | Host to serve visualization. Defaults to `"0.0.0.0"`. ~~str~~ |
|
||||
| `auto_select_port` | If `True`, automatically switch to a different port if the specified port is already in use. Defaults to `False`. ~~bool~~ |
|
||||
|
||||
### displacy.render {id="displacy.render",tag="method",version="2"}
|
||||
|
||||
|
|
|
@ -365,6 +365,46 @@ else:
|
|||
|
||||
</Accordion>
|
||||
|
||||
#### Fuzzy matching {#fuzzy new="3.5"}
|
||||
|
||||
Fuzzy matching allows you to match tokens with alternate spellings, typos, etc.
|
||||
without specifying every possible variant.
|
||||
|
||||
```python
|
||||
# Matches "favourite", "favorites", "gavorite", "theatre", "theatr", ...
|
||||
pattern = [{"TEXT": {"FUZZY": "favorite"}},
|
||||
{"TEXT": {"FUZZY": "theater"}}]
|
||||
```
|
||||
|
||||
The `FUZZY` attribute allows fuzzy matches for any attribute string value,
|
||||
including custom attributes. Just like `REGEX`, it always needs to be applied to
|
||||
an attribute like `TEXT` or `LOWER`. By default `FUZZY` allows a Levenshtein
|
||||
edit distance of at least 2 and up to 30% of the pattern string length. Using
|
||||
the more specific attributes `FUZZY1`..`FUZZY9` you can specify the maximum
|
||||
allowed edit distance directly.
|
||||
|
||||
```python
|
||||
# Match lowercase with fuzzy matching (allows 2 edits)
|
||||
pattern = [{"LOWER": {"FUZZY": "definitely"}}]
|
||||
|
||||
# Match custom attribute values with fuzzy matching (allows 2 edits)
|
||||
pattern = [{"_": {"country": {"FUZZY": "Kyrgyzstan"}}}]
|
||||
|
||||
# Match with exact Levenshtein edit distance limits (allows 3 edits)
|
||||
pattern = [{"_": {"country": {"FUZZY3": "Kyrgyzstan"}}}]
|
||||
```
|
||||
|
||||
#### Regex and fuzzy matching with lists {#regex-fuzzy-lists new="3.5"}
|
||||
|
||||
Starting in spaCy v3.5, both `REGEX` and `FUZZY` can be combined with the
|
||||
attributes `IN` and `NOT_IN`:
|
||||
|
||||
```python
|
||||
pattern = [{"TEXT": {"FUZZY": {"IN": ["awesome", "cool", "wonderful"]}}}]
|
||||
|
||||
pattern = [{"TEXT": {"REGEX": {"NOT_IN": ["^awe(some)?$", "^wonder(ful)?"]}}}]
|
||||
```
|
||||
|
||||
---
|
||||
|
||||
#### Operators and quantifiers {id="quantifiers"}
|
||||
|
|
Loading…
Reference in New Issue
Block a user