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* Read in OntoNotes. Doesn't support train/test/dev split yet
This commit is contained in:
Matthew Honnibal
parent
732fa7709a
commit
e140e03516
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@ -21,10 +21,13 @@ doc: {
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Consumes output of spacy/munge/align_raw.py
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"""
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from __future__ import unicode_literals
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import plac
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import json
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from os import path
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import os
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import re
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import codecs
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from spacy.munge import read_ptb
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from spacy.munge import read_conll
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@ -40,78 +43,150 @@ def _iter_raw_files(raw_loc):
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def format_doc(file_id, raw_paras, ptb_text, dep_text, ner_text):
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ptb_sents = read_ptb.split(ptb_text)
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dep_sents = read_conll.split(dep_text)
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ner_sents = read_ner.split(ner_text) if ner_text is not None else None
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assert len(ptb_sents) == len(dep_sents)
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if len(ptb_sents) != len(dep_sents):
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return None
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if ner_text is not None:
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ner_sents = read_ner.split(ner_text)
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else:
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ner_sents = [None] * len(ptb_sents)
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i = 0
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doc = {'id': file_id, 'paragraphs': []}
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for raw_sents in raw_paras:
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para = {
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'raw': ' '.join(sent.replace('<SEP>', '') for sent in raw_sents),
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'sents': [],
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'tokens': [],
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'brackets': [],
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'entities': []}
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offset = 0
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for raw_sent in raw_sents:
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_, brackets = read_ptb.parse(ptb_sents[i], strip_bad_periods=True)
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_, annot = read_conll.parse(dep_sents[i], strip_bad_periods=True)
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if ner_sents is not None:
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_, ner = read_ner.parse(ner_sents[i], strip_bad_periods=True)
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assert len(ner) == len(annot)
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else:
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ner = ['-' for _ in annot]
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for token_id, token in enumerate(annot):
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try:
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head = (token['head'] + offset) if token['head'] != -1 else -1
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para['tokens'].append({
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'id': offset + token_id,
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'orth': token['word'],
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'tag': token['tag'],
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'head': head,
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'dep': token['dep'],
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'ner': ner[token_id]})
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except:
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raise
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for label, start, end in brackets:
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if start != end:
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para['brackets'].append({
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'label': label,
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'first': start + offset,
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'last': (end-1) + offset})
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i += 1
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offset += len(annot)
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para['sents'].append(offset)
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doc['paragraphs'].append(para)
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doc = {'id': file_id}
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if raw_paras is None:
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doc['paragraphs'] = [format_para(None, ptb_sents, dep_sents, ner_sents)]
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else:
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doc['paragraphs'] = []
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for raw_sents in raw_paras:
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doc['paragraphs'].append(
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format_para(
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' '.join(raw_sents).replace('<SEP>', ''),
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ptb_sents[i:i+len(raw_sents)],
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dep_sents[i:i+len(raw_sents)],
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ner_sents[i:i+len(raw_sents)]))
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i += len(raw_sents)
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return doc
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def main(onto_dir, raw_dir, out_dir):
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def format_para(raw_text, ptb_sents, dep_sents, ner_sents):
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para = {
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'raw': raw_text,
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'sents': [],
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'tokens': [],
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'brackets': []}
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offset = 0
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assert len(ptb_sents) == len(dep_sents) == len(ner_sents)
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for ptb_text, dep_text, ner_text in zip(ptb_sents, dep_sents, ner_sents):
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_, annot = read_conll.parse(dep_text, strip_bad_periods=True)
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if ner_text is not None:
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_, ner = read_ner.parse(ner_text, strip_bad_periods=True)
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else:
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ner = ['-' for _ in annot]
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for token_id, (token, token_ent) in enumerate(zip(annot, ner)):
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para['tokens'].append(format_token(offset, token_id, token, token_ent))
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_, brackets = read_ptb.parse(ptb_text, strip_bad_periods=True)
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for label, start, end in brackets:
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if start != end:
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para['brackets'].append({
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'label': label,
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'first': start + offset,
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'last': (end-1) + offset})
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offset += len(annot)
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para['sents'].append(offset)
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return para
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def format_token(offset, token_id, token, ner):
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head = (token['head'] + offset) if token['head'] != -1 else -1
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return {
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'id': offset + token_id,
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'orth': token['word'],
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'tag': token['tag'],
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'head': head,
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'dep': token['dep'],
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'ner': ner}
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def read_file(*pieces):
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loc = path.join(*pieces)
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if not path.exists(loc):
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return None
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else:
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return codecs.open(loc, 'r', 'utf8').read().strip()
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def get_file_names(section_dir, subsection):
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filenames = []
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for fn in os.listdir(path.join(section_dir, subsection)):
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filenames.append(fn.rsplit('.', 1)[0])
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return list(sorted(set(filenames)))
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def main(onto_dir, raw_dir, out_loc):
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# All but WSJ --- we do that separately, as we have the source docs
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sections = [
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'bc/cctv',
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'bc/cnn',
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'bc/msnbc',
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'bc/p2.5_a2e',
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'bc/p2.5_c2e',
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'bc/phoenix',
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'bn/abc',
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'bn/cnn',
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'bn/mnb',
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'bn/nbc',
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'bn/p2.5_a2e',
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'bn/p2.5_c2e',
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'bn/pri',
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'bn/voa',
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'mz/sinorama',
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'nw/dev_09_c2e',
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'nw/p2.5_a2e',
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'nw/p2.5_c2e',
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'nw/xinhua',
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'pt/ot',
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'tc/ch',
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'wb/a2e',
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'wb/c2e',
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'wb/eng',
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'wb/dev_09_c2e',
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'wb/p2.5_a2e',
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'wb/p2.5_c2e',
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'wb/sel'
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]
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docs = []
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for section in sections:
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section_dir = path.join(onto_dir, 'data', 'english', 'annotations', section)
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print section, len(docs)
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for subsection in os.listdir(section_dir):
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for fn in get_file_names(section_dir, subsection):
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ptb = read_file(section_dir, subsection, '%s.parse' % fn)
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dep = read_file(section_dir, subsection, '%s.parse.dep' % fn)
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ner = read_file(section_dir, subsection, '%s.name' % fn)
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if ptb is not None:
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doc = format_doc(fn, None, ptb, dep, ner)
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if doc is not None:
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docs.append(doc)
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# Now do WSJ, with source alignment
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onto_dir = path.join(onto_dir, 'data', 'english', 'annotations', 'nw', 'wsj')
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for i in range(25):
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section = str(i) if i >= 10 else ('0' + str(i))
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raw_loc = path.join(raw_dir, 'wsj%s.json' % section)
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docs = []
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for j, (filename, raw_paras) in enumerate(_iter_raw_files(raw_loc)):
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if section == '00':
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j += 1
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if section == '04' and filename == '55':
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continue
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ptb_loc = path.join(onto_dir, section, '%s.parse' % filename)
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dep_loc = ptb_loc + '.dep'
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ner_loc = path.join(onto_dir, section, '%s.name' % filename)
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if path.exists(ptb_loc) and path.exists(dep_loc) and path.exists(ner_loc):
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docs.append(
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format_doc(
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filename,
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raw_paras,
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open(ptb_loc).read().strip(),
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open(dep_loc).read().strip(),
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open(ner_loc).read().strip() if path.exists(ner_loc) else None))
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with open(path.join(out_dir, '%s.json' % section), 'w') as file_:
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json.dump(docs, file_, indent=4)
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ptb = read_file(onto_dir, section, '%s.parse' % filename)
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dep = read_file(onto_dir, section, '%s.parse.dep' % filename)
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ner = read_file(onto_dir, section, '%s.name' % filename)
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if ptb is not None and dep is not None:
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docs.append(format_doc(filename, raw_paras, ptb, dep, ner))
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print 'nw/wsj', len(docs)
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with open(out_loc, 'w') as file_:
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json.dump(docs, file_, indent=4)
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if __name__ == '__main__':
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plac.call(main)
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