Commit Graph

16052 Commits

Author SHA1 Message Date
Connor Brinton
6dd56868de
📝 Fix formula for receptive field in docs (#12918)
SpaCy's HashEmbedCNN layer performs convolutions over tokens to produce
contextualized embeddings using a `MaxoutWindowEncoder` layer. These
convolutions are implemented using Thinc's `expand_window` layer, which
concatenates `window_size` neighboring sequence items on either side of
the sequence item being processed. This is repeated across `depth`
convolutional layers.

For example, consider the sequence "ABCDE" and a `MaxoutWindowEncoder`
layer with a context window of 1 and a depth of 2. We'll focus on the
token "C". We can visually represent the contextual embedding produced
for "C" as:
```mermaid
flowchart LR
A0(A<sub>0</sub>)
B0(B<sub>0</sub>)
C0(C<sub>0</sub>)
D0(D<sub>0</sub>)
E0(E<sub>0</sub>)
B1(B<sub>1</sub>)
C1(C<sub>1</sub>)
D1(D<sub>1</sub>)
C2(C<sub>2</sub>)
A0 --> B1
B0 --> B1
C0 --> B1
B0 --> C1
C0 --> C1
D0 --> C1
C0 --> D1
D0 --> D1
E0 --> D1
B1 --> C2
C1 --> C2
D1 --> C2
```

Described in words, this graph shows that before the first layer of the
convolution, the "receptive field" centered at each token consists only
of that same token. That is to say, that we have a receptive field of 1.
The first layer of the convolution adds one neighboring token on either
side to the receptive field. Since this is done on both sides, the
receptive field increases by 2, giving the first layer a receptive field
of 3. The second layer of the convolutions adds an _additional_
neighboring token on either side to the receptive field, giving a final
receptive field of 5.

However, this doesn't match the formula currently given in the docs,
which read:
> The receptive field of the CNN will be
> `depth * (window_size * 2 + 1)`, so a 4-layer network with a window
> size of `2` will be sensitive to 20 words at a time.

Substituting in our depth of 2 and window size of 1, this formula gives
us a receptive field of:
```
depth * (window_size * 2 + 1)
= 2 * (1 * 2 + 1)
= 2 * (2 + 1)
= 2 * 3
= 6
```

This not only doesn't match our computations from above, it's also an
even number! This is suspicious, since the receptive field is supposed
to be centered on a token, and not between tokens. Generally, this
formula results in an even number for any even value of `depth`.

The error in this formula is that the adjustment for the center token
is multiplied by the depth, when it should occur only once. The
corrected formula, `depth * window_size * 2 + 1`, gives the correct
value for our small example from above:
```
depth * window_size * 2 + 1
= 2 * 1 * 2 + 1
= 4 + 1
= 5
```

These changes update the docs to correct the receptive field formula and
the example receptive field size.
2023-08-21 10:52:32 +02:00
Adriane Boyd
198488ee86
Extend to weasel v0.3 (#12908)
* Extend to weasel v0.3

* Clean up unused imports in test_cli
2023-08-16 17:36:53 +02:00
Adriane Boyd
76a9f9c6c6
Docs: clarify abstract spacy.load examples (#12889) 2023-08-16 17:28:34 +02:00
William Mattingly
64b8ee2dbe
Update universe.json (#12904)
* Update universe.json

added hobbit-spacy to the universe json

* Update universe.json

removed displacy from hobbit-spacy and added a default text.
2023-08-14 16:44:14 +02:00
denizcodeyaa
d50b8d51e2
Update examples.py (#12895)
Add: example sentences to improve the Turkish model. Let's get the tr_web_core_sm out in the the world yaa
2023-08-11 15:38:06 +02:00
Adriane Boyd
6a4aa43164
Extend to thinc v8.2 (#12897) 2023-08-11 13:05:46 +02:00
Adriane Boyd
9622c11529
Extend to weasel v0.2 (#12902) 2023-08-11 10:59:51 +02:00
Adriane Boyd
6ef29c4115
Merge pull request #12901 from adrianeboyd/feature/spacy-transformers-v1.3-revert
Revert "Extend to spacy-transformers v1.3.x (#12877)"
2023-08-10 16:43:10 +02:00
Adriane Boyd
060241a8d5 Revert "Extend to spacy-transformers v1.3.x (#12877)"
This reverts commit e5773e0c69.
2023-08-10 11:42:09 +02:00
Adriane Boyd
458bc5f45c
Set version to v3.6.1 (#12892) 2023-08-08 15:04:13 +02:00
Adriane Boyd
c4e378df97
Update CuPy extras (#12890)
* Add `cuda12x` for `cupy-cuda12x`.
* Drop `cuda-autodetect` from quickstart, set default to `cuda11x`
instead.
2023-08-08 12:58:28 +02:00
Adriane Boyd
245e2ddc25
Allow pydantic v2 using transitional v1 support (#12888) 2023-08-08 11:27:28 +02:00
Adriane Boyd
45af8a5dcf
Update br tags (#12882)
* Fix displacy br tag

* Prefer <br>, also update package CLI
2023-08-04 10:52:41 +02:00
Sofie Van Landeghem
3b7faf4f5e
fix (#12881) 2023-08-03 08:37:43 +02:00
Arman Mohammadi
07407e07ab
fix the regular expression matching on the full text (#12883)
There was a mistake in the regex pattern which caused not matching all the desired tokens. The problem was that when we use r string literal prefix to suppose a raw text, we should not use two backslashes to demonstrate a backslash.
2023-08-02 16:52:26 +02:00
Adriane Boyd
e5773e0c69
Extend to spacy-transformers v1.3.x (#12877) 2023-08-02 09:35:16 +02:00
Sofie Van Landeghem
0737443096
feat: add example stubs (3) (#12801)
* feat: add example stubs

* fix: add required annotations

* fix: mypy issues

* fix: use Py36-compatible Portocol

* Minor reformatting

* adding further type specifications and removing internal methods

* black formatting

* widen type to iterable

* add private methods that are being used by the built-in convertors

* revert changes to corpus.py

* fixes

* fixes

* fix typing of PlainTextCorpus

---------

Co-authored-by: Basile Dura <basile@bdura.me>
Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2023-08-02 08:15:12 +02:00
Madeesh Kannan
222bd3c5b1
Display model's full base version string in incompatiblity warning (#12857) 2023-08-02 08:06:41 +02:00
Adriane Boyd
0fe43f40f1
Support registered vectors (#12492)
* Support registered vectors

* Format

* Auto-fill [nlp] on load from config and from bytes/disk

* Only auto-fill [nlp]

* Undo all changes to Language.from_disk

* Expand BaseVectors

These methods are needed in various places for training and vector
similarity.

* isort

* More linting

* Only fill [nlp.vectors]

* Update spacy/vocab.pyx

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Revert changes to test related to auto-filling [nlp]

* Add vectors registry

* Rephrase error about vocab methods for vectors

* Switch to dummy implementation for BaseVectors.to_ops

* Add initial draft of docs

* Remove example from BaseVectors docs

* Apply suggestions from code review

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Update website/docs/api/basevectors.mdx

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Fix type and lint bpemb example

* Update website/docs/api/basevectors.mdx

---------

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2023-08-01 15:46:08 +02:00
Peter Baumgartner
a0a195688f
Tests for CLI app - init config generates train-able config (#12173)
* remove migration support form

* initial test commit

* add fixture

* add combo test

* pull out parameter example data

* fix formatting on examples

* remove unused import

* remove unncessary fmt:off instructions

* only set logger level if verbose flag is explicitly set

---------

Co-authored-by: svlandeg <svlandeg@github.com>
2023-07-31 14:45:04 +02:00
Andy Friedman
186889ec9c
added entry for SaysWho (#12828)
* Update universe.json

added entry for Sayswho

* Update universe.json

updated sayswho entry

* Update universe.json

* Update website/meta/universe.json

* Update website/meta/universe.json

---------

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2023-07-31 10:52:32 +02:00
Sofie Van Landeghem
c9e9dccf79
Add displaCy data structures to docs (2) (#12875)
* Add data structures to docs

* Adjusted descriptions for more consistency

* Add _optional_ flag to parameters

* Add tests and adjust optional title key in doc

* Add title to dep visualizations

* fix typo

---------

Co-authored-by: thomashacker <EdwardSchmuhl@web.de>
2023-07-31 10:47:57 +02:00
Victoria
49055ed7c8
Add cli for finding locations of registered func (#12757)
* Add cli for finding locations of registered func

* fixes: naming and typing

* isort

* update naming

* remove to find-function

* remove file:// bit

* use registry name if given and exit gracefully if a registry was not found

* clean up failure msg

* specify registry_name options

* mypy fixes

* return location for internal usage

* add documentation

* more mypy fixes

* clean up example

* add section to menu

* add tests

---------

Co-authored-by: svlandeg <svlandeg@github.com>
2023-07-31 09:39:00 +02:00
Adriane Boyd
9ffa5d8a15
Remove ray extra (#12870) 2023-07-28 15:48:36 +02:00
Márton Kardos
51b9655470
Added OdyCy to spaCy Universe (#12826)
* Added OdyCy to spaCy Universe

* Replaced template tags

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

---------

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2023-07-26 16:05:53 +02:00
Madeesh Kannan
98799d849e
SpanCat: Remove invalid threshold config argument (#12860) 2023-07-26 13:56:31 +02:00
Adriane Boyd
f8f489bcd6
Switch from distutils to setuptools/sysconfig (#12853)
Additionally remove outdated `is_new_osx` check and settings.
2023-07-24 16:58:27 +02:00
Victoria
e2b89012a2
Add spacy-llm docs to website (#12782)
* initial commit

* update for v0.4.0

* Apply suggestions from code review

* Fix formatting

* Apply suggestions from code review

* Update website/docs/api/large-language-models.mdx

* Update website/docs/api/large-language-models.mdx

* update usage page

* Apply suggestions from review

* Apply suggestions from review

* fix links

* fix relative links

* Apply suggestions from code review

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Apply suggestions from code review

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Apply suggestions from review

* Add section on Llama 2. Format.

---------

Co-authored-by: Raphael Mitsch <r.mitsch@outlook.com>
Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2023-07-24 14:44:47 +02:00
Adriane Boyd
1d216a7ea6
Update README for v3.6 (#12844)
* Update most recent release
* Switch from azure to GHA CI tests badge
* Remove link to survey
* Format
2023-07-24 10:41:04 +02:00
Adriane Boyd
5888afa884
Update numpy build constraints for numpy 1.25 (#12839)
* Update numpy build constraints for numpy 1.25

Starting in numpy 1.25 (see
https://github.com/numpy/numpy/releases/tag/v1.25.0), the numpy C API is
backwards-compatible by default.

For python 3.9+, we should be able to drop the specific numpy build
requirements and use `numpy>=1.25`, which is currently
backwards-compatible to `numpy>=1.19`.

In the future, the python <3.9 requirements could be dropped and the
lower numpy pin could correspond to the oldest supported version for the
current lower python pin.

* Turn off fail-fast

* Revert "Turn off fail-fast"

This reverts commit 4306f516bc.

* Update for python 3.6

* Fix typo
2023-07-24 10:32:56 +02:00
Jacobo Myerston
4f8daa4f00
Add Left and Right Pointing Angle Brackets as punctuation to ancient Greek (#12829)
* Update universe.json

* Update universe.json

add some missing commas in the greCy's description.

* Update punctuation.py

Add mathematical left and right angle brackets as punctuation for ancient Greek for better tokenization.
2023-07-20 11:16:01 +02:00
Sofie Van Landeghem
ea54d1775a
Merge pull request #12840 from svlandeg/sync_develop
Sync develop
2023-07-19 13:12:51 +02:00
svlandeg
79ec68f01b Merge branch 'upstream_master' into sync_develop 2023-07-19 12:08:52 +02:00
Basile Dura
b0228d8ea6
ci: add cython linter (#12694)
* chore: add cython-linter dev dependency

* fix: lexeme.pyx

* fix: morphology.pxd

* fix: tokenizer.pxd

* fix: vocab.pxd

* fix: morphology.pxd (line length)

* ci: add cython-lint

* ci: fix cython-lint call

* Fix kb/candidate.pyx.

* Fix kb/kb.pyx.

* Fix kb/kb_in_memory.pyx.

* Fix kb.

* Fix training/ partially.

* Fix training/. Ignore trailing whitespaces and too long lines.

* Fix ml/.

* Fix matcher/.

* Fix pipeline/.

* Fix tokens/.

* Fix build errors. Fix vocab.pyx.

* Fix cython-lint install and run.

* Fix lexeme.pyx, parts_of_speech.pxd, vectors.pyx. Temporarily disable cython-lint execution.

* Fix attrs.pyx, lexeme.pyx, symbols.pxd, isort issues.

* Make cython-lint install conditional. Fix tokenizer.pyx.

* Fix remaining files. Reenable cython-lint check.

* Readded parentheses.

* Fix test_build_dependencies().

* Add explanatory comment to cython-lint execution.

---------

Co-authored-by: Raphael Mitsch <r.mitsch@outlook.com>
2023-07-19 12:03:31 +02:00
Adriane Boyd
1509c96694
Clean up unused code in Language (#12836)
Follow-up to #12701.
2023-07-18 14:10:30 +02:00
Adriane Boyd
6bf7c65329
Update matcher pattern validation tests (#12835)
- parametrize over individual token patterns (as originally intended, as
far as I can tell)
- add a test for lowercase `in` in patterns
2023-07-18 10:00:07 +02:00
Adriane Boyd
95075298f5
Update pex Makefile defaults (#12832)
* Update pex Makefile defaults

- switch to python 3.8
- only install spacy-lookups-data for extra packages

* Update website for pex defaults
2023-07-18 09:29:04 +02:00
Ian Thompson
ef20e114e0
Typo fix in Language.replace_listeners docs (#12823)
* modified:   spacy/language.py
	- corrected typo in docstring for :method:`Language.replace_listeners`
	- added noqa comment on unused local variable assignment in :method:`Language.from_config` as I wasn't sure if it should be unassigned

modified:   website/docs/api/language.mdx
	- corrected typo in `Language.replace_listeners` markdown

* modified:   spacy/language.py
	- removed noqa comment

---------

Co-authored-by: Ian Thompson <ian.thompson@hrblock.com>
2023-07-14 09:45:54 +02:00
Connor Brinton
0566c3a166
🐛 Escape annotated HTML tags in span renderer (#12817)
These changes add a missing call to `escape_html` in the displaCy span
renderer. Previously span-annotated tokens would be inserted into the
page markup without being escaped, resulting in potentially incorrect
rendering. When I encountered this issue, it resulted in some docs and
span underlines being superimposed on top of properly rendered docs and
span underlines near the beginning of the visualization (due to an
unescaped `<span>` tag).
2023-07-13 17:33:05 +02:00
Sofie Van Landeghem
ddffd09602
Trainable lemmatizer docs link (#12795)
* add an anchor to the trainable lemmatizer section

* add requirement for morphologizer,tagger to rule-based lemmatizer

* morphologizer only
2023-07-07 15:18:16 +02:00
Adriane Boyd
1a55661cfb
Update website binder version to v3.6 (#12805) 2023-07-07 10:52:33 +02:00
Adriane Boyd
41dba5bd34
Update max_length default in span finder docs (#12803) 2023-07-07 10:17:41 +02:00
Sofie Van Landeghem
b1b20bf69d
Replace projects functionality with weasel (#12769)
* Setting up weasel branch (#12456)

* remove project-specific functionality

* remove project-specific tests

* remove project-specific schemas

* remove project-specific information in about

* remove project-specific functions in util.py

* remove project-specific error strings

* remove project-specific CLI commands

* black formatting

* restore some functions that are used beyond projects

* remove project imports

* remove imports

* remove remote_storage tests

* remove one more project unit test

* update for PR 12394

* remove get_hash and get_checksum

* remove upload_ and download_file methods

* remove ensure_pathy

* revert clumsy fingers

* reinstate E970

* feat: use weasel as spacy project command (#12473)

* feat: use weasel as spacy project command

* build: use constrained requirement for weasel

* feat: add weasel to the library requirements

* build: update weasel to new version

* build: use specific weasel tag

* build: use weasel-0.1.0rc1 from PyPI

* fix: remove weasel from requirements.txt

* fix: requirements.txt and setup.cfg need to reflect each other

* feat: remove legacy spacy project code

* bump version

* further merge fixes

* isort

---------

Co-authored-by: Basile Dura <bdura@users.noreply.github.com>
2023-07-07 09:10:27 +02:00
Sofie Van Landeghem
9e63006b12
Merge pull request #12800 from explosion/master_copy
Sync develop with master
2023-07-07 08:44:19 +02:00
svlandeg
991bcc111e disable tests until 3.7 models are available 2023-07-07 08:09:57 +02:00
Madeesh Kannan
d195923164
Set version to 3.7.0.dev0 (#12799) 2023-07-06 18:29:03 +02:00
svlandeg
d26e4e0849 Revert "feat: add example stubs (#12679)"
This reverts commit 30bb34533a.
2023-07-06 17:02:38 +02:00
Basile Dura
30bb34533a
feat: add example stubs (#12679)
* feat: add example stubs

* fix: add required annotations

* fix: mypy issues

* fix: use Py36-compatible Portocol

* Minor reformatting

---------

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
Co-authored-by: svlandeg <svlandeg@github.com>
2023-07-06 16:49:43 +02:00
Adriane Boyd
6fc153a266
Merge pull request #12794 from adrianeboyd/chore/v3.6.0-2
Reenable compat+models tests for v3.6.0
2023-07-06 13:22:21 +02:00
Adriane Boyd
4e19ec7eb8
Docs for v3.6.0 (#12792)
* Docs for v3.6.0

* Add sl performance

* Add da trf note
2023-07-06 12:58:25 +02:00