Commit Graph

415 Commits

Author SHA1 Message Date
Ines Montani
c23e234d65 Auto-format 2019-04-01 12:11:27 +02:00
Matthew Honnibal
1c8ff59185
Merge pull request #3441 from explosion/fix/cli-ud-scripts
💫 Move UD scripts to bin
2019-03-20 12:19:15 +01:00
Matthew Honnibal
1612990e88 Implement cosine loss for spacy pretrain. Make default 2019-03-20 11:06:58 +00:00
Ines Montani
7400c7f8a7 Move UD scripts to bin 2019-03-20 01:19:34 +01:00
Ines Montani
685fff40cf Revert "Add --always-link flag to cli.download (see #3435)"
This reverts commit 583a566843.
2019-03-20 01:03:40 +01:00
Ines Montani
583a566843 Add --always-link flag to cli.download (see #3435) 2019-03-19 22:03:27 +01:00
Matthew Honnibal
47e110375d Fix jsonl to json conversion (#3419)
* Fix spacy.gold.docs_to_json function

* Fix jsonl2json converter
2019-03-17 22:12:54 +01:00
Ines Montani
226db621d0 Strip out .dev versions in spacy validate [ci skip] 2019-03-17 12:16:53 +01:00
Matthew Honnibal
62afa64a8d Expose batch size and length caps on CLI for pretrain (#3417)
Add and document CLI options for batch size, max doc length, min doc length for `spacy pretrain`.

Also improve CLI output.

Closes #3216 

## Checklist
<!--- Before you submit the PR, go over this checklist and make sure you can
tick off all the boxes. [] -> [x] -->
- [x] I have submitted the spaCy Contributor Agreement.
- [x] I ran the tests, and all new and existing tests passed.
- [x] My changes don't require a change to the documentation, or if they do, I've added all required information.
2019-03-16 21:38:45 +01:00
Matthew Honnibal
58d562d9b0
Merge pull request #3416 from explosion/feature/improve-beam
Improve beam search support
2019-03-16 18:42:18 +01:00
Ines Montani
0f8739c7cb Update train.py 2019-03-16 16:04:15 +01:00
Ines Montani
e7aa25d9b1 Fix beam width integration 2019-03-16 16:02:47 +01:00
Ines Montani
c94742ff64 Only add beam width if customised 2019-03-16 15:55:31 +01:00
Ines Montani
7a354761c7 Auto-format 2019-03-16 15:55:13 +01:00
Matthew Honnibal
daa8c3787a Add eval_beam_widths argument to spacy train 2019-03-16 15:02:39 +01:00
Ryan Ford
00842d7f1b Merging conversion scripts for conll formats (#3405)
* merging conllu/conll and conllubio scripts

* tabs to spaces

* removing conllubio2json from converters/__init__.py

* Move not-really-CLI tests to misc

* Add converter test using no-ud data

* Fix test I broke

* removing include_biluo parameter

* fixing read_conllx

* remove include_biluo from convert.py
2019-03-15 18:14:46 +01:00
Matthew Honnibal
f762c36e61 Evaluate accuracy at multiple beam widths 2019-03-15 15:19:49 +01:00
Ines Montani
3fe5811fa7 Only link model after download if shortcut link (#3378) 2019-03-10 13:02:24 +01:00
Ines Montani
76764fcf59 💫 Improve converters and training data file formats (#3374)
* Populate converter argument info automatically

* Add conversion option for msgpack

* Update docs

* Allow reading training data from JSONL
2019-03-08 23:15:23 +01:00
Ines Montani
daaeeb7a2b Merge branch 'master' into develop 2019-03-07 22:07:31 +01:00
Adrien Ball
88909a9adb Fix egg fragments in direct download (#3369)
## Description
The egg fragment in the URL must be of the form `#egg=package_name==version` instead of `#egg=package_name-version`.
One of the consequences of specifying wrong egg fragments is that `pip` does not recognize the package and its version properly, and thus it re-downloads the package systematically.

I'm not sure how this should be tested properly. 
Here is what I had before the fix when running the same direct download twice:
```
$ python -m spacy download en_core_web_sm-2.0.0 --direct
Looking in indexes: https://pypi.python.org/simple/
Collecting en_core_web_sm-2.0.0 from https://github.com/explosion/spacy-models/releases/download/en_core_web_sm-2.0.0/en_core_web_sm-2.0.0.tar.gz#egg=en_core_web_sm-2.0.0
  Downloading https://github.com/explosion/spacy-models/releases/download/en_core_web_sm-2.0.0/en_core_web_sm-2.0.0.tar.gz (37.4MB)
    100% |████████████████████████████████| 37.4MB 1.6MB/s
  Generating metadata for package en-core-web-sm-2.0.0 produced metadata for project name en-core-web-sm. Fix your #egg=en-core-web-sm-2.0.0 fragments.
Installing collected packages: en-core-web-sm
  Running setup.py install for en-core-web-sm ... done
Successfully installed en-core-web-sm-2.0.0
$ python -m spacy download en_core_web_sm-2.0.0 --direct
Looking in indexes: https://pypi.python.org/simple/
Collecting en_core_web_sm-2.0.0 from https://github.com/explosion/spacy-models/releases/download/en_core_web_sm-2.0.0/en_core_web_sm-2.0.0.tar.gz#egg=en_core_web_sm-2.0.0
  Downloading https://github.com/explosion/spacy-models/releases/download/en_core_web_sm-2.0.0/en_core_web_sm-2.0.0.tar.gz (37.4MB)
    100% |████████████████████████████████| 37.4MB 919kB/s
  Generating metadata for package en-core-web-sm-2.0.0 produced metadata for project name en-core-web-sm. Fix your #egg=en-core-web-sm-2.0.0 fragments.
Requirement already satisfied (use --upgrade to upgrade): en-core-web-sm from https://github.com/explosion/spacy-models/releases/download/en_core_web_sm-2.0.0/en_core_web_sm-2.0.0.tar.gz#egg=en_core_web_sm-2.0.0 in ./venv3/lib/python3.6/site-packages
```

And after the fix:
```
$ python -m spacy download en_core_web_sm-2.0.0 --direct
Looking in indexes: https://pypi.python.org/simple/
Collecting en_core_web_sm==2.0.0 from https://github.com/explosion/spacy-models/releases/download/en_core_web_sm-2.0.0/en_core_web_sm-2.0.0.tar.gz#egg=en_core_web_sm==2.0.0
  Downloading https://github.com/explosion/spacy-models/releases/download/en_core_web_sm-2.0.0/en_core_web_sm-2.0.0.tar.gz (37.4MB)
    100% |████████████████████████████████| 37.4MB 1.1MB/s
Installing collected packages: en-core-web-sm
  Running setup.py install for en-core-web-sm ... done
Successfully installed en-core-web-sm-2.0.0
$ python -m spacy download en_core_web_sm-2.0.0 --direct
Looking in indexes: https://pypi.python.org/simple/
Requirement already satisfied: en_core_web_sm==2.0.0 from https://github.com/explosion/spacy-models/releases/download/en_core_web_sm-2.0.0/en_core_web_sm-2.0.0.tar.gz#egg=en_core_web_sm==2.0.0 in ./venv3/lib/python3.6/site-packages (2.0.0)
```

### Types of change
This is an enhancement as it avoids unnecessary downloads of (potentially big) spacy models, when they have already been downloaded.

## Checklist
- [x] I have submitted the spaCy Contributor Agreement.
- [x] I ran the tests, and all new and existing tests passed.
- [x] My changes don't require a change to the documentation, or if they do, I've added all required information.
2019-03-07 21:07:19 +01:00
Ines Montani
5651a0d052 💫 Replace {Doc,Span}.merge with Doc.retokenize (#3280)
* Add deprecation warning to Doc.merge and Span.merge

* Replace {Doc,Span}.merge with Doc.retokenize
2019-02-15 10:29:44 +01:00
Ines Montani
483dddc9bc 💫 Add token match pattern validation via JSON schemas (#3244)
* Add custom MatchPatternError

* Improve validators and add validation option to Matcher

* Adjust formatting

* Never validate in Matcher within PhraseMatcher

If we do decide to make validate default to True, the PhraseMatcher's Matcher shouldn't ever validate. Here, we create the patterns automatically anyways (and it's currently unclear whether the validation has performance impacts at a very large scale).
2019-02-13 01:47:26 +11:00
Ines Montani
25602c794c Tidy up and fix small bugs and typos 2019-02-08 14:14:49 +01:00
Ines Montani
5d0b60999d Merge branch 'master' into develop 2019-02-07 20:54:07 +01:00
Ines Montani
338d659bd0 Store JSON schemas in Python and tidy up (#3235) 2019-02-07 19:44:31 +11:00
Sofie
66016ac289 Batch UD evaluation script (#3174)
* running UD eval

* printing timing of tokenizer: tokens per second

* timing of default English model

* structured output and parameterization to compare different runs

* additional flag to allow evaluation without parsing info

* printing verbose log of errors for manual inspection

* printing over- and undersegmented cases (and combo's)

* add under and oversegmented numbers to Score and structured output

* print high-freq over/under segmented words and word shapes

* printing examples as part of the structured output

* print the results to file

* batch run of different models and treebanks per language

* cleaning up code

* commandline script to process all languages in spaCy & UD

* heuristic to remove blinded corpora and option to run one single best per language

* pathlib instead of os for file paths
2019-01-27 06:01:02 +01:00
Gavriel Loria
9a5003d5c8 iob converter: add 'exception' for error 'too many values' (#3159)
* added contributor agreement

* issue #3128 throw exception on bad IOB/2 formatting

* Update spacy/cli/converters/iob2json.py with ValueError

Co-Authored-By: gavrieltal <gtloria@protonmail.com>
2019-01-16 13:44:16 +01:00
Mark Neumann
e599ed9ef8 Allow vectors to be optional in init-model, more robust string counting (#3155)
* more robust init-model

* key not word

* add license agreement
2019-01-14 23:48:30 +01:00
Jari Bakken
ba8a840f84 spacy.cli.evaluate: fix TypeError (#3101) 2018-12-28 11:14:28 +01:00
Jari Bakken
0546135fba Set vectors.name when updating meta.json during training (#3100)
* Set vectors.name when updating meta.json during training

* add vectors name to meta in `spacy package`
2018-12-27 19:55:40 +01:00
Jari Bakken
cc95167b6d cli.convert: fix typo in converter arguments (#3099) 2018-12-27 18:08:41 +01:00
Matthew Honnibal
1788bf1af7 Unbreak progress bar 2018-12-20 13:57:00 +01:00
Matthew Honnibal
c315e08e6e Fix formatting of meta.json after spacy package 2018-12-19 14:36:08 +01:00
Matthew Honnibal
0f83b98afa Remove unused code from spacy pretrain 2018-12-18 19:19:26 +01:00
Ines Montani
ae880ef912 Tidy up merge conflict leftovers 2018-12-18 13:58:30 +01:00
Ines Montani
61d09c481b Merge branch 'master' into develop 2018-12-18 13:48:10 +01:00
Matthew Honnibal
92f4b9c8ea set max batch size to 1000 2018-12-17 23:15:39 +00:00
Matthew Honnibal
7c504b6ddb Try to implement more losses for pretraining
* Try to implement cosine loss
This one seems to be correct? Still unsure, but it performs okay

* Try to implement the von Mises-Fisher loss
This one's definitely not right yet.
2018-12-17 14:48:27 +00:00
Matthew Honnibal
ab9494b2a3 Merge branch 'develop' of https://github.com/explosion/spaCy into develop 2018-12-12 21:08:50 +00:00
Matthew Honnibal
fb56028476 Remove b1 and b2 decay 2018-12-12 12:37:07 +01:00
Matthew Honnibal
df15279e88 Reduce batch size during pretrain 2018-12-10 15:30:23 +00:00
Matthew Honnibal
83ac227bd3
💫 Better support for semi-supervised learning (#3035)
The new spacy pretrain command implemented BERT/ULMFit/etc-like transfer learning, using our Language Modelling with Approximate Outputs version of BERT's cloze task. Pretraining is convenient, but in some ways it's a bit of a strange solution. All we're doing is initialising the weights. At the same time, we're putting a lot of work into our optimisation so that it's less sensitive to initial conditions, and more likely to find good optima. I discuss this a bit in the pseudo-rehearsal blog post: https://explosion.ai/blog/pseudo-rehearsal-catastrophic-forgetting
Support semi-supervised learning in spacy train

One obvious way to improve these pretraining methods is to do multi-task learning, instead of just transfer learning. This has been shown to work very well: https://arxiv.org/pdf/1809.08370.pdf . This patch makes it easy to do this sort of thing.

    Add a new argument to spacy train, --raw-text. This takes a jsonl file with unlabelled data that can be used in arbitrary ways to do semi-supervised learning.

    Add a new method to the Language class and to pipeline components, .rehearse(). This is like .update(), but doesn't expect GoldParse objects. It takes a batch of Doc objects, and performs an update on some semi-supervised objective.

    Move the BERT-LMAO objective out from spacy/cli/pretrain.py into spacy/_ml.py, so we can create a new pipeline component, ClozeMultitask. This can be specified as a parser or NER multitask in the spacy train command. Example usage:

python -m spacy train en ./tmp ~/data/en-core-web/train/nw.json ~/data/en-core-web/dev/nw.json --pipeline parser --raw-textt ~/data/unlabelled/reddit-100k.jsonl --vectors en_vectors_web_lg --parser-multitasks cloze

Implement rehearsal methods for pipeline components

The new --raw-text argument and nlp.rehearse() method also gives us a good place to implement the the idea in the pseudo-rehearsal blog post in the parser. This works as follows:

    Add a new nlp.resume_training() method. This allocates copies of pre-trained models in the pipeline, setting things up for the rehearsal updates. It also returns an optimizer object. This also greatly reduces confusion around the nlp.begin_training() method, which randomises the weights, making it not suitable for adding new labels or otherwise fine-tuning a pre-trained model.

    Implement rehearsal updates on the Parser class, making it available for the dependency parser and NER. During rehearsal, the initial model is used to supervise the model being trained. The current model is asked to match the predictions of the initial model on some data. This minimises catastrophic forgetting, by keeping the model's predictions close to the original. See the blog post for details.

    Implement rehearsal updates for tagger

    Implement rehearsal updates for text categoriz
2018-12-10 16:25:33 +01:00
Matthew Honnibal
b1c8731b4d Make spacy train respect LOG_FRIENDLY 2018-12-10 09:46:53 +01:00
Matthew Honnibal
0994dc50d8 Merge branch 'develop' of https://github.com/explosion/spaCy into develop 2018-12-10 05:35:01 +00:00
Matthew Honnibal
24f2e9bc07 Tweak training params 2018-12-09 17:08:58 +00:00
Matthew Honnibal
1b1a1af193 Fix printing in spacy train 2018-12-09 06:03:49 +01:00
Matthew Honnibal
cb16b78b0d Set dropout rate to 0.2 2018-12-08 19:59:11 +01:00
Ines Montani
ffdd5e964f
Small CLI improvements (#3030)
* Add todo

* Auto-format

* Update wasabi pin

* Format training results with wasabi

* Remove loading animation from model saving

Currently behaves weirdly

* Inline messages

* Remove unnecessary path2str

Already taken care of by printer

* Inline messages in CLI

* Remove unused function

* Move loading indicator into loading function

* Check for invalid whitespace entities
2018-12-08 11:49:43 +01:00
Matthew Honnibal
b2bfd1e1c8 Move dropout and batch sizes out of global scope in train cmd 2018-12-07 20:54:35 +01:00