Commit Graph

565 Commits

Author SHA1 Message Date
svlandeg
bf819ba302 Merge remote-tracking branch 'upstream/develop' into whatif/arrow
# Conflicts:
#	spacy/cli/train.py
#	spacy/gold.pyx
#	spacy/ml/models/multi_task.py
#	spacy/ml/models/simple_ner.py
#	spacy/ml/models/textcat.py
#	spacy/ml/models/tok2vec.py
#	spacy/pipeline/pipes.pyx
#	spacy/pipeline/simple_ner.py
#	spacy/scorer.py
#	spacy/tests/parser/test_add_label.py
#	spacy/tests/parser/test_nn_beam.py
#	spacy/tests/pipeline/test_morphologizer.py
#	spacy/tests/test_scorer.py
#	spacy/tests/test_util.py
#	spacy/util.py
2020-06-22 15:15:20 +02:00
Matthew Honnibal
6a75992af6 Format 2020-06-22 01:11:43 +02:00
Matthew Honnibal
49145b9ec1 Update DocBin
Add missing strings when serializing
2020-06-22 00:54:35 +02:00
Matthew Honnibal
a5ebfb20f5 Serialize all attrs by default
Move converters under spacy.gold

Move things around

Fix naming

Fix name

Update converter to produce DocBin

Update converters

Make spacy convert output docbin

Fix import

Fix docbin

Fix import

Update converter

Remove jsonl converter

Add json2docs converter
2020-06-22 00:46:08 +02:00
Matthew Honnibal
5467cb4aae Allow DocBin to take list of Doc objects. 2020-06-22 00:46:08 +02:00
Matthew Honnibal
e2279eab1c Make doc.from_array several times faster 2020-06-22 00:46:08 +02:00
Matthew Honnibal
de32515bf8 Allocate Doc before starting to add words 2020-06-22 00:46:08 +02:00
svlandeg
dc069e90b3 fix token.morph_ for v.3 (cf PR #5517) 2020-06-20 21:13:11 +02:00
Ines Montani
52728d8fa3 Merge branch 'develop' into master-tmp 2020-06-20 15:52:00 +02:00
svlandeg
10d396977e add support for MORPH in to/from_array, fix morphologizer overfitting test 2020-06-17 17:48:07 +02:00
svlandeg
fd5f199feb fixing language and scoring tests 2020-06-15 15:02:05 +02:00
svlandeg
b4d914ec77 fix error catching 2020-06-15 12:56:32 +02:00
svlandeg
b9c9cbb2cd informative error when calling to_array with wrong field 2020-06-15 11:53:31 +02:00
svlandeg
a48553c1ed fix error numbers 2020-06-15 08:51:31 +02:00
svlandeg
3aed177a35 fix ENT_IOB conversion and enable unit test 2020-06-12 11:30:24 +02:00
Matthew Honnibal
d9289712ba * Make GoldCorpus return dict, not Example
* Make Example require a Doc object (previously optional)

Clarify methods in GoldCorpus

WIP refactor Example

Refactor Example.split_sents

Fix test

Fix augment

Update test

Update test

Fix import

Update test_scorer

Update Example
2020-06-09 01:01:59 +02:00
Matthew Honnibal
1d2e39d974 Support to_dict in Doc 2020-06-06 15:10:10 +02:00
Ines Montani
810fce3bb1 Merge branch 'develop' into master-tmp 2020-06-03 14:36:59 +02:00
Adriane Boyd
e1b7cbd197 Remove MorphAnalysis __str__ and __repr__ 2020-05-29 14:33:47 +02:00
Ines Montani
1a15896ba9 unicode -> str consistency [ci skip] 2020-05-24 18:51:10 +02:00
Ines Montani
5d3806e059 unicode -> str consistency 2020-05-24 17:20:58 +02:00
Adriane Boyd
71fe61fdcd Disallow merging 0-length spans 2020-05-22 10:14:34 +02:00
Ines Montani
24f72c669c Merge branch 'develop' into master-tmp 2020-05-21 18:39:06 +02:00
adrianeboyd
a5cd203284
Reduce stored lexemes data, move feats to lookups (#5238)
* Reduce stored lexemes data, move feats to lookups

* Move non-derivable lexemes features (`norm / cluster / prob`) to
`spacy-lookups-data` as lookups
  * Get/set `norm` in both lookups and `LexemeC`, serialize in lookups
  * Remove `cluster` and `prob` from `LexemesC`, get/set/serialize in
    lookups only
* Remove serialization of lexemes data as `vocab/lexemes.bin`
  * Remove `SerializedLexemeC`
  * Remove `Lexeme.to_bytes/from_bytes`
* Modify normalization exception loading:
  * Always create `Vocab.lookups` table `lexeme_norm` for
    normalization exceptions
  * Load base exceptions from `lang.norm_exceptions`, but load
    language-specific exceptions from lookups
  * Set `lex_attr_getter[NORM]` including new lookups table in
    `BaseDefaults.create_vocab()` and when deserializing `Vocab`
* Remove all cached lexemes when deserializing vocab to override
  existing normalizations with the new normalizations (as a replacement
  for the previous step that replaced all lexemes data with the
  deserialized data)

* Skip English normalization test

Skip English normalization test because the data is now in
`spacy-lookups-data`.

* Remove norm exceptions

Moved to spacy-lookups-data.

* Move norm exceptions test to spacy-lookups-data

* Load extra lookups from spacy-lookups-data lazily

Load extra lookups (currently for cluster and prob) lazily from the
entry point `lg_extra` as `Vocab.lookups_extra`.

* Skip creating lexeme cache on load

To improve model loading times, do not create the full lexeme cache when
loading. The lexemes will be created on demand when processing.

* Identify numeric values in Lexeme.set_attrs()

With the removal of a special case for `PROB`, also identify `float` to
avoid trying to convert it with the `StringStore`.

* Skip lexeme cache init in from_bytes

* Unskip and update lookups tests for python3.6+

* Update vocab pickle to include lookups_extra

* Update vocab serialization tests

Check strings rather than lexemes since lexemes aren't initialized
automatically, account for addition of "_SP".

* Re-skip lookups test because of python3.5

* Skip PROB/float values in Lexeme.set_attrs

* Convert is_oov from lexeme flag to lex in vectors

Instead of storing `is_oov` as a lexeme flag, `is_oov` reports whether
the lexeme has a vector.

Co-authored-by: Matthew Honnibal <honnibal+gh@gmail.com>
2020-05-19 15:59:14 +02:00
adrianeboyd
e63880e081
Use Token.sent_start for Span.sent (#5439)
Use `Token.sent_start` for sentence boundaries in `Span.sent` so that
`Doc.sents` and `Span.sent` return the same sentence boundaries.
2020-05-14 18:22:51 +02:00
Vishnu Priya VR
9ce059dd06
Limiting noun_chunks for specific languages (#5396)
* Limiting noun_chunks for specific langauges

* Limiting noun_chunks for specific languages

Contributor Agreement

* Addressing review comments

* Removed unused fixtures and imports

* Add fa_tokenizer in test suite

* Use fa_tokenizer in test

* Undo extraneous reformatting

Co-authored-by: adrianeboyd <adrianeboyd@gmail.com>
2020-05-14 12:58:06 +02:00
adrianeboyd
3f43c73d37
Normalize TokenC.sent_start values for Matcher (#5346)
Normalize TokenC.sent_start values to booleans for the `Matcher`.
2020-04-29 12:57:30 +02:00
Ines Montani
efec28ce70
Merge pull request #5367 from adrianeboyd/feature/simplify-warnings-v2 2020-04-29 12:55:37 +02:00
adrianeboyd
a6e521cd79
Add is_sent_end token property (#5375)
Reconstruction of the original PR #4697 by @MiniLau.

Removes unused `SENT_END` symbol and `IS_SENT_END` from `Matcher` schema
because the Matcher is only going to be able to support `IS_SENT_START`.
2020-04-29 12:53:16 +02:00
Adriane Boyd
bc39f97e11 Simplify warnings 2020-04-28 13:37:37 +02:00
adrianeboyd
f8ac5b9f56
bugfix in span similarity (#5155) (#5358)
* bugfix in span similarity

* also rewrite doc.pyx for clarity

* formatting

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2020-04-27 16:51:27 +02:00
adrianeboyd
b71a11ff6d
Update morphologizer (#5108)
* Add pos and morph scoring to Scorer

Add pos, morph, and morph_per_type to `Scorer`. Report pos and morph
accuracy in `spacy evaluate`.

* Update morphologizer for v3

* switch to tagger-based morphologizer
* use `spacy.HashCharEmbedCNN` for morphologizer defaults
* add `Doc.is_morphed` flag

* Add morphologizer to train CLI

* Add basic morphologizer pipeline tests

* Add simple morphologizer training example

* Remove subword_features from CharEmbed models

Remove `subword_features` argument from `spacy.HashCharEmbedCNN.v1` and
`spacy.HashCharEmbedBiLSTM.v1` since in these cases `subword_features`
is always `False`.

* Rename setting in morphologizer example

Use `with_pos_tags` instead of `without_pos_tags`.

* Fix kwargs for spacy.HashCharEmbedBiLSTM.v1

* Remove defaults for spacy.HashCharEmbedBiLSTM.v1

Remove default `nM/nC` for `spacy.HashCharEmbedBiLSTM.v1`.

* Set random seed for textcat overfitting test
2020-04-02 14:46:32 +02:00
Sofie Van Landeghem
d6d95674c1
bugfix in span similarity (#5155)
* bugfix in span similarity

* also rewrite doc.pyx for clarity

* formatting
2020-03-29 13:56:07 +02:00
Ines Montani
70ee4ef4fd Fix small errors 2020-03-26 13:47:31 +01:00
Ines Montani
46568f40a7 Merge branch 'master' into tmp/sync 2020-03-26 13:38:14 +01:00
svlandeg
59000ee21d fix serialization of empty doc + unit test 2020-03-13 16:07:56 +01:00
svlandeg
1724a4f75b additional information if doc is empty 2020-03-09 18:08:18 +01:00
Sofie Van Landeghem
1a2b8fc264
set vector of merged entity (#5085)
* merge_entities sets the vector in the vocab for the merged token

* add unit test

* import unicode_literals

* move code to _merge function

* only set vector if vocab has non-zero vectors
2020-03-06 14:45:28 +01:00
Ines Montani
b0cfab317f Merge branch 'develop' into refactor/simplify-warnings 2020-03-04 16:38:55 +01:00
adrianeboyd
9be90dbca3
Improve token head verification (#5079)
* Improve token head verification

Improve the verification for valid token heads when heads are set:

* in `Token.head`: heads come from the same document
* in `Doc.from_array()`: head indices are within the bounds of the
document

* Improve error message
2020-03-03 21:44:51 +01:00
adrianeboyd
d078b47c81
Break out of infinite loop as intended (#5077) 2020-03-03 12:29:05 +01:00
Sofie Van Landeghem
c6b12ab02a
Bugfix/get doc (#5049)
* new (broken) unit test

* fixing get_doc method
2020-03-02 11:49:28 +01:00
Ines Montani
648f61d077
Tidy up compiler flags and imports (#5071) 2020-03-02 11:48:10 +01:00
Ines Montani
37691e6d5d Simplify warnings 2020-02-28 12:20:23 +01:00
Ines Montani
4440a072d2
Merge pull request #5006 from svlandeg/bugfix/multiproc-underscore
load Underscore state when multiprocessing
2020-02-25 14:46:02 +01:00
Tom Keefe
ddf63b97a8
make idx available via to_array (#5030) 2020-02-22 14:13:06 +01:00
Ines Montani
e3f40a6a0f Tidy up and auto-format 2020-02-18 15:38:18 +01:00
Ines Montani
de11ea753a Merge branch 'master' into develop 2020-02-18 14:47:23 +01:00
adrianeboyd
3b22eb651b
Sync Span __eq__ and __hash__ (#5005)
* Sync Span __eq__ and __hash__

Use the same tuple for `__eq__` and `__hash__`, including all attributes
except `vector` and `vector_norm`.

* Update entity comparison in tests

Update `assert_docs_equal()` test util to compare `Span` properties for
ents rather than `Span` objects.
2020-02-16 17:20:36 +01:00
adrianeboyd
5b102963bf
Require HEAD for is_parsed in Doc.from_array() (#5011)
Modify flag settings so that `DEP` is not sufficient to set `is_parsed`
and only run `set_children_from_heads()` if `HEAD` is provided.

Then the combination `[SENT_START, DEP]` will set deps and not clobber
sent starts with a lot of one-word sentences.
2020-02-16 17:17:09 +01:00