Commit Graph

1061 Commits

Author SHA1 Message Date
Sofie Van Landeghem
554df9ef20
Website migration from Gatsby to Next (#12058)
* Rename all MDX file to `.mdx`

* Lock current node version (#11885)

* Apply Prettier (#11996)

* Minor website fixes (#11974) [ci skip]

* fix table

* Migrate to Next WEB-17 (#12005)

* Initial commit

* Run `npx create-next-app@13 next-blog`

* Install MDX packages

Following: 77b5f79a4d/packages/next-mdx/readme.md

* Add MDX to Next

* Allow Next to handle `.md` and `.mdx` files.

* Add VSCode extension recommendation

* Disabled TypeScript strict mode for now

* Add prettier

* Apply Prettier to all files

* Make sure to use correct Node version

* Add basic implementation for `MDXRemote`

* Add experimental Rust MDX parser

* Add `/public`

* Add SASS support

* Remove default pages and styling

* Convert to module

This allows to use `import/export` syntax

* Add import for custom components

* Add ability to load plugins

* Extract function

This will make the next commit easier to read

* Allow to handle directories for page creation

* Refactoring

* Allow to parse subfolders for pages

* Extract logic

* Redirect `index.mdx` to parent directory

* Disabled ESLint during builds

* Disabled typescript during build

* Remove Gatsby from `README.md`

* Rephrase Docker part of `README.md`

* Update project structure in `README.md`

* Move and rename plugins

* Update plugin for wrapping sections

* Add dependencies for  plugin

* Use  plugin

* Rename wrapper type

* Simplify unnessary adding of id to sections

The slugified section ids are useless, because they can not be referenced anywhere anyway. The navigation only works if the section has the same id as the heading.

* Add plugin for custom attributes on Markdown elements

* Add plugin to readd support for tables

* Add plugin to fix problem with wrapped images

For more details see this issue: https://github.com/mdx-js/mdx/issues/1798

* Add necessary meta data to pages

* Install necessary dependencies

* Remove outdated MDX handling

* Remove reliance on `InlineList`

* Use existing Remark components

* Remove unallowed heading

Before `h1` components where not overwritten and would never have worked and they aren't used anywhere either.

* Add missing components to MDX

* Add correct styling

* Fix broken list

* Fix broken CSS classes

* Implement layout

* Fix links

* Fix broken images

* Fix pattern image

* Fix heading attributes

* Rename heading attribute

`new` was causing some weird issue, so renaming it to `version`

* Update comment syntax in MDX

* Merge imports

* Fix markdown rendering inside components

* Add model pages

* Simplify anchors

* Fix default value for theme

* Add Universe index page

* Add Universe categories

* Add Universe projects

* Fix Next problem with copy

Next complains when the server renders something different then the client, therfor we move the differing logic to `useEffect`

* Fix improper component nesting

Next doesn't allow block elements inside a `<p>`

* Replace landing page MDX with page component

* Remove inlined iframe content

* Remove ability to inline HTML content in iFrames

* Remove MDX imports

* Fix problem with image inside link in MDX

* Escape character for MDX

* Fix unescaped characters in MDX

* Fix headings with logo

* Allow to export static HTML pages

* Add prebuild script

This command is automatically run by Next

* Replace `svg-loader` with `react-inlinesvg`

`svg-loader` is no longer maintained

* Fix ESLint `react-hooks/exhaustive-deps`

* Fix dropdowns

* Change code language from `cli` to `bash`

* Remove unnessary language `none`

* Fix invalid code language

`markdown_` with an underscore was used to basically turn of syntax highlighting, but using unknown languages know throws an error.

* Enable code blocks plugin

* Readd `InlineCode` component

MDX2 removed the `inlineCode` component

> The special component name `inlineCode` was removed, we recommend to use `pre` for the block version of code, and code for both the block and inline versions

Source: https://mdxjs.com/migrating/v2/#update-mdx-content

* Remove unused code

* Extract function to own file

* Fix code syntax highlighting

* Update syntax for code block meta data

* Remove unused prop

* Fix internal link recognition

There is a problem with regex between Node and browser, and since Next runs the component on both, this create an error.

`Prop `rel` did not match. Server: "null" Client: "noopener nofollow noreferrer"`

This simplifies the implementation and fixes the above error.

* Replace `react-helmet` with `next/head`

* Fix `className` problem for JSX component

* Fix broken bold markdown

* Convert file to `.mjs` to be used by Node process

* Add plugin to replace strings

* Fix custom table row styling

* Fix problem with `span` inside inline `code`

React doesn't allow a `span` inside an inline `code` element and throws an error in dev mode.

* Add `_document` to be able to customize `<html>` and `<body>`

* Add `lang="en"`

* Store Netlify settings in file

This way we don't need to update via Netlify UI, which can be tricky if changing build settings.

* Add sitemap

* Add Smartypants

* Add PWA support

* Add `manifest.webmanifest`

* Fix bug with anchor links after reloading

There was no need for the previous implementation, since the browser handles this nativly. Additional the manual scrolling into view was actually broken, because the heading would disappear behind the menu bar.

* Rename custom event

I was googeling for ages to find out what kind of event `inview` is, only to figure out it was a custom event with a name that sounds pretty much like a native one. 🫠

* Fix missing comment syntax highlighting

* Refactor Quickstart component

The previous implementation was hidding the irrelevant lines via data-props and dynamically generated CSS. This created problems with Next and was also hard to follow. CSS was used to do what React is supposed to handle.

The new implementation simplfy filters the list of children (React elements) via their props.

* Fix syntax highlighting for Training Quickstart

* Unify code rendering

* Improve error logging in Juniper

* Fix Juniper component

* Automatically generate "Read Next" link

* Add Plausible

* Use recent DocSearch component and adjust styling

* Fix images

* Turn of image optimization

> Image Optimization using Next.js' default loader is not compatible with `next export`.

We currently deploy to Netlify via `next export`

* Dont build pages starting with `_`

* Remove unused files

* Add Next plugin to Netlify

* Fix button layout

MDX automatically adds `p` tags around text on a new line and Prettier wants to put the text on a new line. Hacking with JSX string.

* Add 404 page

* Apply Prettier

* Update Prettier for `package.json`

Next sometimes wants to patch `package-lock.json`. The old Prettier setting indended with 4 spaces, but Next always indends with 2 spaces. Since `npm install` automatically uses the indendation from `package.json` for `package-lock.json` and to avoid the format switching back and forth, both files are now set to 2 spaces.

* Apply Next patch to `package-lock.json`

When starting the dev server Next would warn `warn  - Found lockfile missing swc dependencies, patching...` and update the `package-lock.json`. These are the patched changes.

* fix link

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* small backslash fixes

* adjust to new style

Co-authored-by: Marcus Blättermann <marcus@essenmitsosse.de>
2023-01-11 17:30:07 +01:00
Kevin Humphreys
19650ebb52
Enable fuzzy text matching in Matcher (#11359)
* enable fuzzy matching

* add fuzzy param to EntityMatcher

* include rapidfuzz_capi

not yet used

* fix type

* add FUZZY predicate

* add fuzzy attribute list

* fix type properly

* tidying

* remove unnecessary dependency

* handle fuzzy sets

* simplify fuzzy sets

* case fix

* switch to FUZZYn predicates

use Levenshtein distance.
remove fuzzy param.
remove rapidfuzz_capi.

* revert changes added for fuzzy param

* switch to polyleven

(Python package)

* enable fuzzy matching

* add fuzzy param to EntityMatcher

* include rapidfuzz_capi

not yet used

* fix type

* add FUZZY predicate

* add fuzzy attribute list

* fix type properly

* tidying

* remove unnecessary dependency

* handle fuzzy sets

* simplify fuzzy sets

* case fix

* switch to FUZZYn predicates

use Levenshtein distance.
remove fuzzy param.
remove rapidfuzz_capi.

* revert changes added for fuzzy param

* switch to polyleven

(Python package)

* fuzzy match only on oov tokens

* remove polyleven

* exclude whitespace tokens

* don't allow more edits than characters

* fix min distance

* reinstate FUZZY operator

with length-based distance function

* handle sets inside regex operator

* remove is_oov check

* attempt build fix

no mypy failure locally

* re-attempt build fix

* don't overwrite fuzzy param value

* move fuzzy_match

to its own Python module to allow patching

* move fuzzy_match back inside Matcher

simplify logic and add tests

* Format tests

* Parametrize fuzzyn tests

* Parametrize and merge fuzzy+set tests

* Format

* Move fuzzy_match to a standalone method

* Change regex kwarg type to bool

* Add types for fuzzy_match

- Refactor variable names
- Add test for symmetrical behavior

* Parametrize fuzzyn+set tests

* Minor refactoring for fuzz/fuzzy

* Make fuzzy_match a Matcher kwarg

* Update type for _default_fuzzy_match

* don't overwrite function param

* Rename to fuzzy_compare

* Update fuzzy_compare default argument declarations

* allow fuzzy_compare override from EntityRuler

* define new Matcher keyword arg

* fix type definition

* Implement fuzzy_compare config option for EntityRuler and SpanRuler

* Rename _default_fuzzy_compare to fuzzy_compare, remove from reexported objects

* Use simpler fuzzy_compare algorithm

* Update types

* Increase minimum to 2 in fuzzy_compare to allow one transposition

* Fix predicate keys and matching for SetPredicate with FUZZY and REGEX

* Add FUZZY6..9

* Add initial docs

* Increase default fuzzy to rounded 30% of pattern length

* Update docs for fuzzy_compare in components

* Update EntityRuler and SpanRuler API docs

* Rename EntityRuler and SpanRuler setting to matcher_fuzzy_compare

To having naming similar to `phrase_matcher_attr`, rename
`fuzzy_compare` setting for `EntityRuler` and `SpanRuler` to
`matcher_fuzzy_compare. Organize next to `phrase_matcher_attr` in docs.

* Fix schema aliases

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Fix typo

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Add FUZZY6-9 operators and update tests

* Parameterize test over greedy

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Fix type for fuzzy_compare to remove Optional

* Rename to spacy.levenshtein_compare.v1, move to spacy.matcher.levenshtein

* Update docs following levenshtein_compare renaming

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2023-01-10 10:36:17 +01:00
Sofie Van Landeghem
4b2097a271
fix links (#11927) 2022-12-05 16:29:13 +09:00
Adriane Boyd
1ebe7db07c
Support local filesystem remotes for projects (#11762)
* Support local filesystem remotes for projects

* Fix support for local filesystem remotes for projects
  * Use `FluidPath` instead of `Pathy` to support both filesystem and
    remote paths
  * Create missing parent directories if required for local filesystem
  * Add a more general `_file_exists` method to support both `Pathy`,
    `Path`, and `smart_open`-compatible URLs
* Add explicit `smart_open` dependency starting with support for
  `compression` flag
* Update `pathy` dependency to exclude older versions that aren't
  compatible with required `smart_open` version
* Update docs to refer to `Pathy` instead of `smart_open` for project
  remotes (technically you can still push to any `smart_open`-compatible
  path but you can't pull from them)
* Add tests for local filesystem remotes

* Update pathy for general BlobStat sorting

* Add import

* Remove _file_exists since only Pathy remotes are supported

* Format CLI docs

* Clean up merge
2022-11-29 11:40:58 +01:00
Peter Baumgartner
9baa686f82
remove migration support form (#11802) 2022-11-14 16:53:14 +01:00
Paul O'Leary McCann
bb523d4d91
Remove spacy-ray from docs (#11781)
* Remove spacy ray from cli docs

* Remove more ray docs

* Remove ray from universe
2022-11-14 19:58:38 +09:00
Edward
3478ff1eb0
remove new v2 tags (#11780) 2022-11-14 17:41:01 +09:00
Raphael Mitsch
20bbbe3e44
Revert disable/disabled merging behavior (#11745)
* Merge disable with disabled. Adjust warnings, errors and tests.

* Replace any() with set operation.

* Update spacy/tests/pipeline/test_pipe_methods.py

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Update docs.

* Remve reference to config entry nlp.enabled from docs.

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2022-11-08 14:58:10 +01:00
Aaron Zipp
d25f09468c
Spelling mistake in rule-based-matching.md (#11717)
Changed retokenize to retokenizer
2022-10-31 13:27:12 +09:00
Adriane Boyd
6c380d4fc6 Merge remote-tracking branch 'upstream/master' into chore/update-develop-from-master-v3.5 2022-10-20 13:45:17 +02:00
Paul O'Leary McCann
bf83f6872a
Add detailed example of env dict usage (#11677)
* Add detailed example of env dict usage

* Mark code blocks as yaml
2022-10-20 20:35:03 +09:00
svlandeg
9c8cdb403e Merge branch 'master_copy' into develop_copy 2022-09-30 15:40:26 +02:00
Paul O'Leary McCann
936a5f0506
Fix English pipeline names in 3.4 release notes (#11542) 2022-09-27 08:25:24 +02:00
Raphael Mitsch
af9b01ef97
Add dependency check to project step runs (#11226)
* Add dependency check to project step running.

* Fix dependency mismatch warning.

* Remove newline.

* Add types-setuptools to setup.cfg.

* Move types-setuptools to test requirements. Move warnings into _validate_requirements(). Handle file reading in project_run().

* Remove newline formatting for output of package conflicts.

* Show full version conflict message instead of just package name.

* Update spacy/cli/project/run.py

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Fix typo.

* Re-add rephrasing of message for conflicting packages. Remove requirements path redundancy.

* Update spacy/cli/project/run.py

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Update spacy/cli/project/run.py

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Print unified message for requirement conflicts and missing requirements.

* Update spacy/cli/project/run.py

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Fix warning message.

* Print conflict/missing messages individually.

* Print conflict/missing messages individually.

* Add check_requirements setting in project.yml to disable requirements check.

* Update website/docs/usage/projects.md

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Update website/docs/usage/projects.md

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Update description of project.yml structure in projects.md.

* Update website/docs/usage/projects.md

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Prettify projects docs.

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2022-09-16 16:54:31 +02:00
Richard Hudson
3f0c3ad7d3
Correct alignment example and documentation (#11491)
* Correct example and documentation

* Added altered example.md

* Changes based on review + apply prettier

* Remote unnecessary 'the'

Co-authored-by: Madeesh Kannan <shadeMe@users.noreply.github.com>

Co-authored-by: Madeesh Kannan <shadeMe@users.noreply.github.com>
2022-09-14 09:36:55 +02:00
Sofie Van Landeghem
cc10a27c59
Prevent tok2vec to broadcast to listeners when predicting (#11385)
* replicate bug with tok2vec in annotating components

* add overfitting test with a frozen tok2vec

* remove broadcast from predict and check doc.tensor instead

* remove broadcast

* proper error

* slight rephrase of documentation
2022-09-12 15:36:48 +02:00
Paul O'Leary McCann
2602a30d32
Fix DVC command example (#11457)
This command doesn't have the project dir, but it's required.
2022-09-08 13:42:47 +02:00
Raphael Mitsch
1f23c615d7
Refactor KB for easier customization (#11268)
* Add implementation of batching + backwards compatibility fixes. Tests indicate issue with batch disambiguation for custom singular entity lookups.

* Fix tests. Add distinction w.r.t. batch size.

* Remove redundant and add new comments.

* Adjust comments. Fix variable naming in EL prediction.

* Fix mypy errors.

* Remove KB entity type config option. Change return types of candidate retrieval functions to Iterable from Iterator. Fix various other issues.

* Update spacy/pipeline/entity_linker.py

Co-authored-by: Paul O'Leary McCann <polm@dampfkraft.com>

* Update spacy/pipeline/entity_linker.py

Co-authored-by: Paul O'Leary McCann <polm@dampfkraft.com>

* Update spacy/kb_base.pyx

Co-authored-by: Paul O'Leary McCann <polm@dampfkraft.com>

* Update spacy/kb_base.pyx

Co-authored-by: Paul O'Leary McCann <polm@dampfkraft.com>

* Update spacy/pipeline/entity_linker.py

Co-authored-by: Paul O'Leary McCann <polm@dampfkraft.com>

* Add error messages to NotImplementedErrors. Remove redundant comment.

* Fix imports.

* Remove redundant comments.

* Rename KnowledgeBase to InMemoryLookupKB and BaseKnowledgeBase to KnowledgeBase.

* Fix tests.

* Update spacy/errors.py

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Move KB into subdirectory.

* Adjust imports after KB move to dedicated subdirectory.

* Fix config imports.

* Move Candidate + retrieval functions to separate module. Fix other, small issues.

* Fix docstrings and error message w.r.t. class names. Fix typing for candidate retrieval functions.

* Update spacy/kb/kb_in_memory.pyx

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Update spacy/ml/models/entity_linker.py

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Fix typing.

* Change typing of mentions to be Span instead of Union[Span, str].

* Update docs.

* Update EntityLinker and _architecture docs.

* Update website/docs/api/entitylinker.md

Co-authored-by: Paul O'Leary McCann <polm@dampfkraft.com>

* Adjust message for E1046.

* Re-add section for Candidate in kb.md, add reference to dedicated page.

* Update docs and docstrings.

* Re-add section + reference for KnowledgeBase.get_alias_candidates() in docs.

* Update spacy/kb/candidate.pyx

* Update spacy/kb/kb_in_memory.pyx

* Update spacy/pipeline/legacy/entity_linker.py

* Remove canididate.md. Remove mistakenly added config snippet in entity_linker.py.

Co-authored-by: Paul O'Leary McCann <polm@dampfkraft.com>
Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2022-09-08 10:38:07 +02:00
Paul O'Leary McCann
977dc33312
Add a way to get the URL to download a pipeline to the CLI (#11175)
* Add a dry run flag to download

* Remove --dry-run, add --url option to `spacy info` instead

* Make mypy happy

* Print only the URL, so it's easier to use in scripts

* Don't add the egg hash unless downloading an sdist

* Update spacy/cli/info.py

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Add two implementations of requirements

* Clean up requirements sample slightly

This should make mypy happy

* Update URL help string

* Remove requirements option

* Add url option to docs

* Add URL to spacy info model output, when available

* Add types-setuptools to testing reqs

* Add types-setuptools to requirements

* Add "compatible", expand docstring

* Update spacy/cli/info.py

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Run prettier on CLI docs

* Update docs

Add a sidebar about finding download URLs, with some examples of the new
command.

* Add download URLs to table on model page

* Apply suggestions from code review

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Updates from review

* download url -> download link

* Update docs

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2022-09-02 11:58:21 +02:00
Tal Zussman
7e75327893
Fix menu order in linguistic-features.md (#11364)
Swap 'Vectors & Similarity' and 'Mappings & Exceptions' in menu to match order in body
2022-08-23 14:40:38 +09:00
Peter Baumgartner
db7b9938a4
Docs: displaCy documentation - data types, parse_{deps,ents,spans}, spans example (#10950)
* add in spans example and parse references

* rm autoformatter

* rm extra ents copy

* TypedDict draft

* type fixes

* restore non-documentation files

* docs update

* fix spans example

* fix hyperlinks

* add parse example

* example fix + argument fix

* fix api arg in docs

* fix bad variable replacement

* fix spacing in style

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* fix spacing on table

* fix spacing on table

* rm temp files

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2022-08-16 11:23:34 -04:00
Adriane Boyd
11f859c132
Docs for v3.4 (#11057)
* Add draft of v3.4 usage

* Add Croatian models

* Add Matcher min/max

* Update release notes

* Minor edits

* Add updates, tables

* Update pydantic/mypy versions

* Update version in README

* Fix sidebar
2022-07-11 15:36:31 +02:00
Adriane Boyd
3701039c1f
Tweak build jobs setting, update install docs (#11077)
* Restrict SPACY_NUM_BUILD_JOBS to only override if set

* Update install docs
2022-07-08 19:21:17 +02:00
Adriane Boyd
be9e17c0e4
Add docs for compiling with build constraints (#11081) 2022-07-08 11:45:56 +02:00
Shen Qin
be00db6645
Addition of min_max quantifier in matcher {n,m} (#10981)
* Min_max_operators
1. Modified API and Usage for spaCy website to include min_max operator
2. Modified matcher.pyx to include min_max function {n,m} and its variants
3. Modified schemas.py to include min_max validation error
4. Added test cases to test_matcher_api.py, test_matcher_logic.py and test_pattern_validation.py

* attempt to fix mypy/pydantic compat issue

* formatting

* Update spacy/tests/matcher/test_pattern_validation.py

Co-authored-by: Source-Shen <82353723+Source-Shen@users.noreply.github.com>
Co-authored-by: svlandeg <svlandeg@github.com>
Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2022-06-30 11:01:58 +02:00
jademlc
bed23ff291
Update serialization methods code block (#11004)
* Update serialization methods code block

* Update website/docs/usage/saving-loading.md

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2022-06-22 20:45:26 +02:00
Victoria
a08ca064e5
Update linguistic-features.md (#10993)
Change link for downloading fasttext word vectors
2022-06-21 15:03:41 +09:00
Raphael Mitsch
4c058eb40a
enable argument for spacy.load() (#10784)
* Enable flag on spacy.load: foundation for include, enable arguments.

* Enable flag on spacy.load: fixed tests.

* Enable flag on spacy.load: switched from pretrained model to empty model with added pipes for tests.

* Enable flag on spacy.load: switched to more consistent error on misspecification of component activity. Test refactoring. Added  to default config.

* Enable flag on spacy.load: added support for fields not in pipeline.

* Enable flag on spacy.load: removed serialization fields from supported fields.

* Enable flag on spacy.load: removed 'enable' from config again.

* Enable flag on spacy.load: relaxed checks in _resolve_component_activation_status() to allow non-standard pipes.

* Enable flag on spacy.load: fixed relaxed checks for _resolve_component_activation_status() to allow non-standard pipes. Extended tests.

* Enable flag on spacy.load: comments w.r.t. resolution workarounds.

* Enable flag on spacy.load: remove include fields. Update website docs.

* Enable flag on spacy.load: updates w.r.t. changes in master.

* Implement Doc.from_json(): update docstrings.

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Implement Doc.from_json(): remove newline.

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Implement Doc.from_json(): change error message for E1038.

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Enable flag on spacy.load: wrapped docstring for _resolve_component_status() at 80 chars.

* Enable flag on spacy.load: changed exmples for enable flag.

* Remove newline.

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Fix docstring for Language._resolve_component_status().

* Rename E1038 to E1042.

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2022-06-17 20:24:13 +01:00
Sofie Van Landeghem
763dcbf885
Fix version in SpanRuler docs (#10925)
* SpanRuler is new since 3.3.1

* update SpanRuler version since 3.3.1
2022-06-08 14:45:04 +02:00
Adriane Boyd
a322d6d5f2
Add SpanRuler component (#9880)
* Add SpanRuler component

Add a `SpanRuler` component similar to `EntityRuler` that saves a list
of matched spans to `Doc.spans[spans_key]`. The matches from the token
and phrase matchers are deduplicated and sorted before assignment but
are not otherwise filtered.

* Update spacy/pipeline/span_ruler.py

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Fix cast

* Add self.key property

* Use number of patterns as length

* Remove patterns kwarg from init

* Update spacy/tests/pipeline/test_span_ruler.py

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Add options for spans filter and setting to ents

* Add `spans_filter` option as a registered function'
* Make `spans_key` optional and if `None`, set to `doc.ents` instead of
`doc.spans[spans_key]`.

* Update and generalize tests

* Add test for setting doc.ents, fix key property type

* Fix typing

* Allow independent doc.spans and doc.ents

* If `spans_key` is set, set `doc.spans` with `spans_filter`.
* If `annotate_ents` is set, set `doc.ents` with `ents_fitler`.
  * Use `util.filter_spans` by default as `ents_filter`.
  * Use a custom warning if the filter does not work for `doc.ents`.

* Enable use of SpanC.id in Span

* Support id in SpanRuler as Span.id

* Update types

* `id` can only be provided as string (already by `PatternType`
definition)

* Update all uses of Span.id/ent_id in Doc

* Rename Span id kwarg to span_id

* Update types and docs

* Add ents filter to mimic EntityRuler overwrite_ents

* Refactor `ents_filter` to take `entities, spans` args for more
  filtering options
* Give registered filters more descriptive names
* Allow registered `filter_spans` filter
  (`spacy.first_longest_spans_filter.v1`) to take any number of
  `Iterable[Span]` objects as args so it can be used for spans filter
  or ents filter

* Implement future entity ruler as span ruler

Implement a compatible `entity_ruler` as `future_entity_ruler` using
`SpanRuler` as the underlying component:
* Add `sort_key` and `sort_reverse` to allow the sorting behavior to be
  customized. (Necessary for the same sorting/filtering as in
  `EntityRuler`.)
* Implement `overwrite_overlapping_ents_filter` and
  `preserve_existing_ents_filter` to support
  `EntityRuler.overwrite_ents` settings.
* Add `remove_by_id` to support `EntityRuler.remove` functionality.
* Refactor `entity_ruler` tests to parametrize all tests to test both
  `entity_ruler` and `future_entity_ruler`
* Implement `SpanRuler.token_patterns` and `SpanRuler.phrase_patterns`
  properties.

Additional changes:

* Move all config settings to top-level attributes to avoid duplicating
  settings in the config vs. `span_ruler/cfg`. (Also avoids a lot of
  casting.)

* Format

* Fix filter make method name

* Refactor to use same error for removing by label or ID

* Also provide existing spans to spans filter

* Support ids property

* Remove token_patterns and phrase_patterns

* Update docstrings

* Add span ruler docs

* Fix types

* Apply suggestions from code review

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Move sorting into filters

* Check for all tokens in seen tokens in entity ruler filters

* Remove registered sort key

* Set Token.ent_id in a backwards-compatible way in Doc.set_ents

* Remove sort options from API docs

* Update docstrings

* Rename entity ruler filters

* Fix and parameterize scoring

* Add id to Span API docs

* Fix typo in API docs

* Include explicit labeled=True for scorer

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2022-06-02 13:12:53 +02:00
Sofie Van Landeghem
83ed1f391b
Remove NBSP's across tables in the docs (#10842) 2022-05-25 09:48:39 +02:00
Peter Baumgartner
7ce3460b23
add floret to static vectors docs (#10833) 2022-05-23 09:16:31 +02:00
Adriane Boyd
a82ec56aae
Remove cuda extras for non-linux arm in install widget (#10796)
* Remove cuda extras for non-linux arm platforms in install widget
* Extend cuda versions install widget
* Update GPU install docs to clarify cuda
2022-05-20 09:57:41 +02:00
Richard Hudson
d524f6415f
Add documentation tip about overriding variables (#10780) 2022-05-11 10:15:32 +02:00
Raphael Mitsch
2904359685
Allow assets to be optional in spacy project (#10714)
* Allow assets to be optional in spacy project: draft for optional flag/download_all options.

* Allow assets to be optional in spacy project: added OPTIONAL_DEFAULT reflecting default asset optionality.

* Allow assets to be optional in spacy project: renamed --all to --extra.

* Allow assets to be optional in spacy project: included optional flag in project config test.

* Allow assets to be optional in spacy project: added documentation.

* Allow assets to be optional in spacy project: fixing deprecated --all reference.

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Allow assets to be optional in spacy project: fixed project_assets() docstring.

* Allow assets to be optional in spacy project: adjusted wording in justification of optional assets.

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Allow assets to be optional in spacy project: switched to  as keyword in project.yml. Updated docs.

* Allow assets to be optional in spacy project: updated comment.

* Allow assets to be optional in spacy project: replacing 'optional' with 'extra' in output.

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Allow assets to be optional in spacy project: replacing 'optional' with 'extra' in docstring..

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Allow assets to be optional in spacy project: replacing 'optional' with 'extra' in test..

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Allow assets to be optional in spacy project: replacing 'optional' with 'extra' in test.

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Allow assets to be optional in spacy project: renamed OPTIONAL_DEFAULT to EXTRA_DEFAULT.

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2022-05-10 10:40:11 +02:00
Madeesh Kannan
733114bdd9
training.md: Fix typos (#10775) 2022-05-09 19:44:14 +02:00
Raphael Mitsch
e626df959f
Document different ways to create a pipeline (#10762)
* Document different ways to create a pipeline: moved up/slightly modified paragraph on pipeline creation.

* Document different ways to create a pipeline: changed Finnish to Ukrainian in example for language without trained pipeline.

* Document different ways to create a pipeline: added explanation of blank pipeline.

* Document different ways to create a pipeline: exchanged Ukrainian with Yoruba.
2022-05-06 15:40:59 +02:00
Sofie Van Landeghem
e03b9f8095
Small doc typos (#10750)
* fix typos

* formatting
2022-05-03 13:55:27 +02:00
Adriane Boyd
497a708c71
Docs for v3.3 (#10628)
* Temporarily disable CI tests

* Start v3.3 website updates

* Add trainable lemmatizer to pipeline design

* Fix Vectors.most_similar

* Add floret vector info to pipeline design

* Add Lower and Upper Sorbian

* Add span to sidebar

* Work on release notes

* Copy from release notes

* Update pipeline design graphic

* Upgrading note about Doc.from_docs

* Add tables and details

* Update website/docs/models/index.md

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Fix da lemma acc

* Add minimal intro, various updates

* Round lemma acc

* Add section on floret / word lists

* Add new pipelines table, minor edits

* Fix displacy spans example title

* Clarify adding non-trainable lemmatizer

* Update adding-languages URLs

* Revert "Temporarily disable CI tests"

This reverts commit 1dee505920.

* Spell out words/sec

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2022-04-28 14:09:35 +02:00
harmbuisman
c066fb8a4e
#10672: fixes displacy output for manual unsorted entities (#10673)
* #10672: fixes displacy output for manual unsorted entities

* #10672: removed unused import

* fix prettier formatting

Co-authored-by: Harm Buisman <h.buisman@iknl.nl>
Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2022-04-27 09:51:58 +02:00
Adriane Boyd
85778dfcf4
Add edit tree lemmatizer (#10231)
* Add edit tree lemmatizer

Co-authored-by: Daniël de Kok <me@danieldk.eu>

* Hide edit tree lemmatizer labels

* Use relative imports

* Switch to single quotes in error message

* Type annotation fixes

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Reformat edit_tree_lemmatizer with black

* EditTreeLemmatizer.predict: take Iterable

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Validate edit trees during deserialization

This change also changes the serialized representation. Rather than
mirroring the deep C structure, we use a simple flat union of the match
and substitution node types.

* Move edit_trees to _edit_tree_internals

* Fix invalid edit tree format error message

* edit_tree_lemmatizer: remove outdated TODO comment

* Rename factory name to trainable_lemmatizer

* Ignore type instead of casting truths to List[Union[Ints1d, Floats2d, List[int], List[str]]] for thinc v8.0.14

* Switch to Tagger.v2

* Add documentation for EditTreeLemmatizer

* docs: Fix 3.2 -> 3.3 somewhere

* trainable_lemmatizer documentation fixes

* docs: EditTreeLemmatizer is in edit_tree_lemmatizer.py

Co-authored-by: Daniël de Kok <me@danieldk.eu>
Co-authored-by: Daniël de Kok <me@github.danieldk.eu>
Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2022-03-28 11:13:50 +02:00
Adriane Boyd
d5666fd12d
Add NORM to Matcher feature in docs (#10560) 2022-03-28 10:35:47 +02:00
Lj Miranda
a79cd3542b
Add displacy support for overlapping Spans (#10332)
* Fix docstring for EntityRenderer

* Add warning in displacy if doc.spans are empty

* Implement parse_spans converter

One notable change here is that the default spans_key is sc, and
it's set by the user through the options.

* Implement SpanRenderer

Here, I implemented a SpanRenderer that looks similar to the
EntityRenderer except for some templates.  The spans_key, by default, is
set to sc, but can be configured in the options (see parse_spans). The
way I rendered these spans is per-token, i.e., I first check if each
token (1) belongs to a given span type and (2) a starting token of a
given span type. Once I have this information, I render them into the
markup.

* Fix mypy issues on typing

* Add tests for displacy spans support

* Update colors from RGB to hex

Co-authored-by: Ines Montani <ines@ines.io>

* Remove unnecessary CSS properties

* Add documentation for website

* Remove unnecesasry scripts

* Update wording on the documentation

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Put typing dependency on top of file

* Put back z-index so that spans overlap properly

* Make warning more explicit for spans_key

Co-authored-by: Ines Montani <ines@ines.io>
Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2022-03-16 18:14:34 +01:00
Adriane Boyd
e8357923ec
Various install docs updates (#10487)
* Simplify quickstart source install to use only editable pip install

* Update pytorch install instructions to more recent versions
2022-03-15 11:12:50 +01:00
Adriane Boyd
297dd82c86
Fix initial special cases for Tokenizer.explain (#10460)
Add the missing initial check for special cases to `Tokenizer.explain`
to align with `Tokenizer._tokenize_affixes`.
2022-03-11 10:50:47 +01:00
Peter Baumgartner
01ec6349ea
Add path.mkdir to custom component examples of to_disk (#10348)
* add `path.mkdir` to examples

* add ensure_path + mkdir

* update highlights
2022-03-08 16:04:10 +01:00
Adriane Boyd
b2bbefd0b5
Add Finnish, Korean, and Swedish models and Korean support notes (#10355)
* Add Finnish, Korean, and Swedish models to website

* Add Korean language support notes
2022-03-07 17:03:45 +01:00
Peter Baumgartner
836f689cc7
YAML multiline tip for project.yml files (#10187)
* MultiHashEmbed vector docs correction

* add in multi-line tip

* convert to sidebar tip
2022-02-08 08:35:09 +01:00
Adriane Boyd
4f441dfa24
Fix infix as prefix in Tokenizer.explain (#10140)
* Fix infix as prefix in Tokenizer.explain

Update `Tokenizer.explain` to align with the `Tokenizer` algorithm:

* skip infix matches that are prefixes in the current substring

* Update tokenizer pseudocode in docs
2022-01-28 17:00:54 +01:00
ColleterVi
a784b12eff
fix: new restcountries url (#10043)
Url extension "eu" and path "rest" are no longer available. Replacing them for a working url.
2022-01-13 20:25:06 +09:00