Commit Graph

455 Commits

Author SHA1 Message Date
Ines Montani
fd750ec3bf Fix msgpack-numpy version pin 2018-10-15 14:18:38 +02:00
Ines Montani
051a6b73eb Update Thinc version pin 2018-10-15 01:40:28 +02:00
Matthew Honnibal
7202abdfa9 Fix specifiers for GPU 2018-10-15 00:08:44 +02:00
Matthew Honnibal
b305b24c24 Require thinc 6.10.6 2018-10-14 23:28:41 +02:00
Matthew Honnibal
6e6f6be3f5 Update requirements and setup.py 2018-10-14 23:06:46 +02:00
Ines Montani
9ebe607f82 Add wheel to setup_requires 2018-10-14 16:38:48 +02:00
Ines Montani
2e675d9523 Update murmurhash pin 2018-10-14 16:37:38 +02:00
Matthew Honnibal
f784e42ffe Try older version of regex 2018-10-03 00:23:40 +02:00
Matthew Honnibal
e4fd2ccd07 Try previous version of regex 2018-10-02 23:37:17 +02:00
Matthew Honnibal
9937ff93e5 Update regex version dependency 2018-10-02 19:43:59 +02:00
Matthew Honnibal
05b6103a0c Try to fix version pin for msgpack-numpy 2018-09-28 14:07:00 +02:00
Matthew Honnibal
276aa83d1a Require older msgpack-numpy 2018-09-27 15:34:24 +02:00
Matthew Honnibal
4336397ecb Update develop from master 2018-08-14 03:04:28 +02:00
Matthew Honnibal
7be9118be3 Require numpy>=1.15.0 to avoid the RuntimeWarning 2018-08-10 00:14:13 +02:00
Matthew Honnibal
cabce07ba6 Fix thinc version requirement 2018-07-21 15:56:33 +02:00
ines
3c30d1763c Merge branch 'master' into develop 2018-07-21 15:34:18 +02:00
Matthew Honnibal
a723fafea3 Require thinc 6.10.3.dev1 2018-07-21 12:49:09 +02:00
ines
95641f4026 Only install pathlib backport on Python < 3.4 2018-07-20 21:08:29 +02:00
Matthew Honnibal
adde3826e2 Build against thinc 6.10.3.dev0 2018-07-20 13:34:54 +02:00
ines
83e88553d4 Add Python 3.7 to setup.py (resolves #2505) 2018-07-04 14:53:51 +02:00
Matthew Honnibal
94ad2d66b6 Require thinc 6.11.2 2018-05-21 19:26:28 +02:00
Matthew Honnibal
f3b4f6a4ec Merge setup.py 2018-05-20 23:21:00 +02:00
Ines Montani
d4cc736b7c 💫 Improve model downloads: check for existing install, customise pip and use requests library again (#2346)
* Go back to using requests instead of urllib (closes #2320)

Fewer dependencies are good, but this one was simply causing too many other problems around SSL verification and Python 2/3 compatibility. requests is a popular enough package that it's okay for spaCy to depend on it – and this will hopefully make model downloads less flakey.

* Only download model if not installed (see #1456)

Use #egg=model==version to allow pip to check for existing installations. The download is only started if no installation matching the package/version is found. Fixes a long-standing inconvenience.

* Pass additional options to pip when installing model (resolves #1456)

Treat all additional arguments passed to the download command as pip options to allow user to customise the command. For example:

python -m spacy download en --user

* Add CLI option to enable installing model package dependencies

* Revert "Add CLI option to enable installing model package dependencies"

This reverts commit 9336ffe695.

* Update documentation
2018-05-20 20:26:56 +02:00
Matthew Honnibal
3eb446e0a5 Require thinc 6.11.1 and prepare for release to spacy-nightly 2018-05-20 19:00:34 +02:00
Matthew Honnibal
260707a4c3 Make thinc look in /usr/local/cuda for cuda by default 2018-05-19 18:12:23 +02:00
Matthew Honnibal
a0b8a26655 Fix missing regex requirement 2018-05-16 23:19:01 +02:00
Matthew Honnibal
13faf4e1ea Update thinc requirement 2018-05-15 18:35:11 +02:00
Matthew Honnibal
4dd1fb3c7b Require thinc 6.11.1.dev16 2018-05-15 17:56:07 +02:00
Matthew Honnibal
5a0f26be0c Readd beam search after refactor 2018-05-08 00:19:52 +02:00
Matthew Honnibal
3e3771c010 Compile updated parser 2018-05-07 15:54:27 +02:00
Matthew Honnibal
535833a38d Fix syntax error in setup.py 2018-04-29 15:47:54 +02:00
Matthew Honnibal
2c4a6d66fa Merge master into develop. Big merge, many conflicts -- need to review 2018-04-29 14:49:26 +02:00
Matthew Honnibal
abf8b16d71
Add doc.retokenize() context manager (#2172)
This patch takes a step towards #1487 by introducing the
doc.retokenize() context manager, to handle merging spans, and soon
splitting tokens.

The idea is to do merging and splitting like this:

with doc.retokenize() as retokenizer:
    for start, end, label in matches:
        retokenizer.merge(doc[start : end], attrs={'ent_type': label})

The retokenizer accumulates the merge requests, and applies them
together at the end of the block. This will allow retokenization to be
more efficient, and much less error prone.

A retokenizer.split() function will then be added, to handle splitting a
single token into multiple tokens. These methods take `Span` and `Token`
objects; if the user wants to go directly from offsets, they can append
to the .merges and .splits lists on the retokenizer.

The doc.merge() method's behaviour remains unchanged, so this patch
should be 100% backwards incompatible (modulo bugs). Internally,
doc.merge() fixes up the arguments (to handle the various deprecated styles),
opens the retokenizer, and makes the single merge.

We can later start making deprecation warnings on direct calls to doc.merge(),
to migrate people to use of the retokenize context manager.
2018-04-03 14:10:35 +02:00
Matthew Honnibal
6efb76bb3f Require next thinc 2018-03-28 23:30:32 +00:00
Matthew Honnibal
8308bbc617 Get msgpack and msgpack_numpy via Thinc, to avoid potential version conflicts 2018-03-29 00:14:55 +02:00
ines
366c98a94b Remove requests dependency 2018-03-28 12:46:18 +02:00
ines
ce6071ca89 Remove ftfy dependency and update docs 2018-03-28 12:09:42 +02:00
ines
6d2c85f428 Drop six and related hacks as a dependency 2018-03-28 10:45:25 +02:00
Matthew Honnibal
1f7229f40f Revert "Merge branch 'develop' of https://github.com/explosion/spaCy into develop"
This reverts commit c9ba3d3c2d, reversing
changes made to 92c26a35d4.
2018-03-27 19:23:02 +02:00
Matthew Honnibal
d2118792e7 Merge changes from master 2018-03-27 13:38:41 +02:00
Matthew Honnibal
c059fcb0ba Update thinc requirement 2018-03-25 19:29:36 +02:00
Matthew Honnibal
bede11b67c
Improve label management in parser and NER (#2108)
This patch does a few smallish things that tighten up the training workflow a little, and allow memory use during training to be reduced by letting the GoldCorpus stream data properly.

Previously, the parser and entity recognizer read and saved labels as lists, with extra labels noted separately. Lists were used becaue ordering is very important, to ensure that the label-to-class mapping is stable.

We now manage labels as nested dictionaries, first keyed by the action, and then keyed by the label. Values are frequencies. The trick is, how do we save new labels? We need to make sure we iterate over these in the same order they're added. Otherwise, we'll get different class IDs, and the model's predictions won't make sense.

To allow stable sorting, we map the new labels to negative values. If we have two new labels, they'll be noted as having "frequency" -1 and -2. The next new label will then have "frequency" -3. When we sort by (frequency, label), we then get a stable sort.

Storing frequencies then allows us to make the next nice improvement. Previously we had to iterate over the whole training set, to pre-process it for the deprojectivisation. This led to storing the whole training set in memory. This was most of the required memory during training.

To prevent this, we now store the frequencies as we stream in the data, and deprojectivize as we go. Once we've built the frequencies, we can then apply a frequency cut-off when we decide how many classes to make.

Finally, to allow proper data streaming, we also have to have some way of shuffling the iterator. This is awkward if the training files have multiple documents in them. To solve this, the GoldCorpus class now writes the training data to disk in msgpack files, one per document. We can then shuffle the data by shuffling the paths.

This is a squash merge, as I made a lot of very small commits. Individual commit messages below.

* Simplify label management for TransitionSystem and its subclasses

* Fix serialization for new label handling format in parser

* Simplify and improve GoldCorpus class. Reduce memory use, write to temp dir

* Set actions in transition system

* Require thinc 6.11.1.dev4

* Fix error in parser init

* Add unicode declaration

* Fix unicode declaration

* Update textcat test

* Try to get model training on less memory

* Print json loc for now

* Try rapidjson to reduce memory use

* Remove rapidjson requirement

* Try rapidjson for reduced mem usage

* Handle None heads when projectivising

* Stream json docs

* Fix train script

* Handle projectivity in GoldParse

* Fix projectivity handling

* Add minibatch_by_words util from ud_train

* Minibatch by number of words in spacy.cli.train

* Move minibatch_by_words util to spacy.util

* Fix label handling

* More hacking at label management in parser

* Fix encoding in msgpack serialization in GoldParse

* Adjust batch sizes in parser training

* Fix minibatch_by_words

* Add merge_subtokens function to pipeline.pyx

* Register merge_subtokens factory

* Restore use of msgpack tmp directory

* Use minibatch-by-words in train

* Handle retokenization in scorer

* Change back-off approach for missing labels. Use 'dep' label

* Update NER for new label management

* Set NER tags for over-segmented words

* Fix label alignment in gold

* Fix label back-off for infrequent labels

* Fix int type in labels dict key

* Fix int type in labels dict key

* Update feature definition for 8 feature set

* Update ud-train script for new label stuff

* Fix json streamer

* Print the line number if conll eval fails

* Update children and sentence boundaries after deprojectivisation

* Export set_children_from_heads from doc.pxd

* Render parses during UD training

* Remove print statement

* Require thinc 6.11.1.dev6. Try adding wheel as install_requires

* Set different dev version, to flush pip cache

* Update thinc version

* Update GoldCorpus docs

* Remove print statements

* Fix formatting and links [ci skip]
2018-03-19 02:58:08 +01:00
Matthew Honnibal
318c23d318 Increment thinc 2018-03-16 13:12:53 +01:00
Matthew Honnibal
39c50225e8 Update thinc 2018-03-16 03:57:47 +01:00
Matthew Honnibal
7be561c8be Fix thinc requirement 2018-03-16 03:34:12 +01:00
Matthew Honnibal
53df6d867b Require new thinc 2018-03-16 03:20:01 +01:00
Matthew Honnibal
f2fa8481c4 Require thinc v6.11 2018-03-13 13:59:35 +01:00
ines
9c8a0f6eba Version-lock msgpack-python (see #2015) 2018-02-22 19:42:03 +01:00
ines
f5f4de98d1 Version-lock msgpack-python (see #2015) 2018-02-22 16:02:32 +01:00
Matthew Honnibal
f46bf2a7e9 Build _align.pyx 2018-02-20 17:32:13 +01:00
ines
6bba1db4cc Drop six and related hacks as a dependency 2018-02-18 13:29:56 +01:00
ines
002ee80ddf Add html5lib to setup.py to fix six error (see #1924) 2018-02-02 20:32:08 +01:00
Matthew Honnibal
2e449c1fbf Fix compiler flags, addressing #1591 2018-01-14 14:34:36 +01:00
Matthew Honnibal
04a92bd75e Pin msgpack-numpy requirement 2017-12-06 03:24:24 +01:00
Hugo
aa898ab4e4 Drop support for EOL Python 2.6 and 3.3 2017-11-26 19:46:24 +02:00
Matthew Honnibal
716ccbb71e Require thinc 6.10.1 2017-11-15 14:59:34 +01:00
Matthew Honnibal
314f5b9cdb Require thinc 6.10.0 2017-10-28 18:20:10 +00:00
Matthew Honnibal
64e4ff7c4b Merge 'tidy-up' changes into branch. Resolve conflicts 2017-10-28 13:16:06 +02:00
ines
7946464742 Remove spacy.tagger (now in pipeline) 2017-10-27 19:45:04 +02:00
Matthew Honnibal
531142a933 Merge remote-tracking branch 'origin/develop' into feature/better-parser 2017-10-27 12:34:48 +00:00
Matthew Honnibal
642eb28c16 Don't compile with OpenMP by default 2017-10-27 10:16:58 +00:00
Matthew Honnibal
90d1d9b230 Remove obsolete parser code 2017-10-26 13:22:45 +02:00
Matthew Honnibal
79fcf8576a Compile with march=native 2017-10-18 21:46:34 +02:00
Matthew Honnibal
2eb0fe4957 Fix setup.py 2017-10-03 21:40:04 +02:00
Matthew Honnibal
b49cc8153a Require correct thinc 2017-09-26 10:00:18 -05:00
ines
68f66aebf8 Use pkg_resources instead of pip for is_package (resolves #1293) 2017-09-16 20:27:59 +02:00
Matthew Honnibal
07cdbd1219 Require thinc 6.8.1, for Windows 2017-09-15 22:47:53 +02:00
Matthew Honnibal
96a4a9070b Compile _beam_utils 2017-08-18 21:56:19 +02:00
Matthew Honnibal
f9ae86b01c Fix requirement 2017-08-18 20:56:53 +02:00
Matthew Honnibal
69bcacdc09 Merge branch 'develop' of https://github.com/explosion/spaCy into develop 2017-08-18 20:47:13 +02:00
Matthew Honnibal
de7f3509d2 Compile CFile, for vector loading 2017-08-18 20:46:41 +02:00
Matthew Honnibal
426f84937f Resolve conflicts when merging new beam parsing stuff 2017-08-18 13:38:32 -05:00
Matthew Honnibal
60d8111245 Require thinc 6.8.1 2017-08-15 03:12:26 -05:00
Matthew Honnibal
52c180ecf5 Revert "Merge branch 'develop' of https://github.com/explosion/spaCy into develop"
This reverts commit ea8de11ad5, reversing
changes made to 08e443e083.
2017-08-14 13:00:23 +02:00
Matthew Honnibal
b353e4d843 Work on parser beam training 2017-08-12 14:47:45 -05:00
ines
495e042429 Add entry point-style auto alias for "spacy"
Simplest way to run commands as spacy xxx instead of python -m spacy
xxx, while avoiding environment conflicts
2017-08-09 12:17:30 +02:00
Matthew Honnibal
ff7418b0d9 Update requirements 2017-07-25 18:58:15 +02:00
Matthew Honnibal
b4cdd05466 Add vectors.pyx in setup 2017-06-05 12:45:29 +02:00
Matthew Honnibal
c811790095 Register vectors.pyx in setup 2017-06-05 12:32:22 +02:00
ines
152dc018a6 Remove syntax iterators from setup.py 2017-06-05 12:30:22 +02:00
Matthew Honnibal
a4dcc96c54 Require thinc bugfix 2017-06-05 04:02:52 -05:00
ines
71954d5fe7 Update Thinc version 2017-06-03 10:32:53 +02:00
ines
f45cd174bf Update Thinc version 2017-06-02 18:48:16 +02:00
Matthew Honnibal
ae8010b526 Move weight serialization to Thinc 2017-06-01 02:56:12 -05:00
Matthew Honnibal
2e364f7ecd Require msgpack 2017-05-29 13:47:29 +02:00
ines
3cc6fe1484 Add pip to requirements.txt and setup.py 2017-05-17 12:04:03 +02:00
Matthew Honnibal
48de4ed49f Require thinc 6.6, and compile the nn_parser module 2017-05-14 01:20:28 +02:00
Matthew Honnibal
825c6403d8 Remove serializer 2017-05-09 17:28:30 +02:00
ines
564939391a Remove spacy.orth 2017-05-09 01:21:47 +02:00
ines
229b8c3974 Tidy up 2017-05-07 18:36:35 +02:00
ines
a793174ae9 Use setuptools.find_packages() 2017-05-03 20:11:02 +02:00
Yasuaki Uechi
c8f83aeb87 Add basic japanese support 2017-05-03 13:56:21 +09:00
Ines Montani
7da9cefd25 Merge pull request #1022 from luvogels/master
Initial support for Norwegian Bokmål
2017-04-27 11:16:06 +02:00
Ines Montani
417f430d23 Relax version contstraint 2017-04-20 15:39:24 +02:00
Gyorgy Orosz
4a06a2572c Using ftfy for handling broken encoded strings. 2017-04-20 13:34:51 +02:00
luvogels
ff900ffd7c Update setup.py
added nb
2017-04-19 21:02:26 +02:00
Matthew Honnibal
e482c369eb Package converters module 2017-04-07 18:51:48 +02:00
Matthew Honnibal
cc24b6d8d5 Fix setup.py 2017-04-07 17:53:22 +02:00
Matthew Honnibal
eedafd8d82 Fix regex version pin 2017-04-07 17:47:11 +02:00
ines
c691caa9d3 Fix requests version 2017-04-07 17:35:35 +02:00