Commit Graph

247 Commits

Author SHA1 Message Date
Ines Montani
aa4ff0baa1 Auto-format [ci skip] 2019-09-12 13:05:53 +02:00
Ines Montani
625ce2db8e Update Language docs [ci skip] 2019-09-12 13:03:38 +02:00
Ines Montani
cb41a33d14 Update displaCy API docs [ci skip] 2019-09-12 12:59:20 +02:00
Sofie Van Landeghem
0b4b4f1819 Documentation for Entity Linking (#4065)
* document token ent_kb_id

* document span kb_id

* update pipeline documentation

* prior and context weights as bool's instead

* entitylinker api documentation

* drop for both models

* finish entitylinker documentation

* small fixes

* documentation for KB

* candidate documentation

* links to api pages in code

* small fix

* frequency examples as counts for consistency

* consistent documentation about tensors returned by predict

* add entity linking to usage 101

* add entity linking infobox and KB section to 101

* entity-linking in linguistic features

* small typo corrections

* training example and docs for entity_linker

* predefined nlp and kb

* revert back to similarity encodings for simplicity (for now)

* set prior probabilities to 0 when excluded

* code clean up

* bugfix: deleting kb ID from tokens when entities were removed

* refactor train el example to use either model or vocab

* pretrain_kb example for example kb generation

* add to training docs for KB + EL example scripts

* small fixes

* error numbering

* ensure the language of vocab and nlp stay consistent across serialization

* equality with =

* avoid conflict in errors file

* add error 151

* final adjustements to the train scripts - consistency

* update of goldparse documentation

* small corrections

* push commit

* typo fix

* add candidate API to kb documentation

* update API sidebar with EntityLinker and KnowledgeBase

* remove EL from 101 docs

* remove entity linker from 101 pipelines / rephrase

* custom el model instead of existing model

* set version to 2.2 for EL functionality

* update documentation for 2 CLI scripts
2019-09-12 11:38:34 +02:00
Sofie Van Landeghem
53a9ca45c9 Docs: bufsize instead of buffsize (#4247) 2019-09-06 11:11:54 +02:00
adrianeboyd
82159b5c19 Updates/bugfixes for NER/IOB converters (#4186)
* Updates/bugfixes for NER/IOB converters

* Converter formats `ner` and `iob` use autodetect to choose a converter if
  possible

* `iob2json` is reverted to handle sentence-per-line data like
  `word1|pos1|ent1 word2|pos2|ent2`

  * Fix bug in `merge_sentences()` so the second sentence in each batch isn't
    skipped

* `conll_ner2json` is made more general so it can handle more formats with
  whitespace-separated columns

  * Supports all formats where the first column is the token and the final
    column is the IOB tag; if present, the second column is the POS tag

  * As in CoNLL 2003 NER, blank lines separate sentences, `-DOCSTART- -X- O O`
    separates documents

  * Add option for segmenting sentences (new flag `-s`)

  * Parser-based sentence segmentation with a provided model, otherwise with
    sentencizer (new option `-b` to specify model)

  * Can group sentences into documents with `n_sents` as long as sentence
    segmentation is available

  * Only applies automatic segmentation when there are no existing delimiters
    in the data

* Provide info about settings applied during conversion with warnings and
  suggestions if settings conflict or might not be not optimal.

* Add tests for common formats

* Add '(default)' back to docs for -c auto

* Add document count back to output

* Revert changes to converter output message

* Use explicit tabs in convert CLI test data

* Adjust/add messages for n_sents=1 default

* Add sample NER data to training examples

* Update README

* Add links in docs to example NER data

* Define msg within converters
2019-08-29 12:04:01 +02:00
Björn Böing
bae0455f91 Fix visualizer options linking for displaCy. (#4202) 2019-08-27 14:04:28 +02:00
Christos Aridas
61f5c007a0 DOC Fix pipeline functions examples (#4189) 2019-08-23 19:15:32 +02:00
Ines Montani
fe230c8776 Fix typo [ci skip] 2019-08-20 13:02:05 +02:00
Daniel Bourke
b0a28fd0de fix PhraseMatcher link typo (#4150)
/api/phtasematcher -> /api/phrasematcher
2019-08-20 13:01:43 +02:00
Ines Montani
ce4c3e5204 Document force flag on set_extension (closes #4148) 2019-08-19 19:22:07 +02:00
adrianeboyd
69aca7d839 Add validate option to EntityRuler (#4089)
* Add validate option to EntityRuler

* Add validate to EntityRuler, passed to Matcher and PhraseMatcher

* Add validate to usage and API docs

* Update website/docs/usage/rule-based-matching.md

Co-Authored-By: Ines Montani <ines@ines.io>

* Update website/docs/usage/rule-based-matching.md

Co-Authored-By: Ines Montani <ines@ines.io>
2019-08-07 00:40:53 +02:00
Ines Montani
0f76e0022d Update .tensor docs [ci skip] 2019-08-01 18:37:09 +02:00
Björn Böing
a83c0add2e Add links to tokenizer API docs to refer relevant information. (#4064)
* Add links to tokenizer API docs to refer relevant information.

* Add suggested changes

Co-Authored-By: Ines Montani <ines@ines.io>
2019-08-01 14:28:38 +02:00
Ejar
2cdf7d39e7 Corrected imported fucntion (#4062)
The example showed an incorrected import
2019-08-01 12:43:36 +02:00
Ines Montani
fcd2f7f656 Fix version introducing Span.ents (closes #4045) [ci skip] 2019-07-30 10:32:33 +02:00
Ines Montani
fc69da0acb
💫 Support simple training format in nlp.evaluate and add tests (#4033)
* Support simple training format in nlp.evaluate and add tests

* Update docs [ci skip]
2019-07-27 17:30:18 +02:00
Ines Montani
1fa6d6ba55 Improve consistency of docs examples [ci skip] 2019-07-25 14:24:56 +02:00
adrianeboyd
784a5f4284 Update GoldParse attributes in API docs (#4023)
* add `words`
* update name of entity list to `ner`

I think it might be a bit more consistent to have `ner` named `entities`
or `ents` (and `ents` is actually set somewhere to `None`, which is a
bit confusing), but it looks like renaming it would be a non-trivial
decision.
2019-07-25 12:14:02 +02:00
Adriane Boyd
6c5044ed2a Update annotation docs for German
- minor formatting fixes
- remove STTS tags not used in Tiger
- update list of dependency relations to match tiger2dep
2019-07-22 11:59:03 +02:00
adrianeboyd
d2c474cbb7 Fix initial example in EntityRuler API docs (#3999) 2019-07-22 11:18:55 +02:00
BreakBB
6d9a7c0749 Add '--silent' argument to bash example of CLI Info 2019-07-19 10:00:45 +02:00
BreakBB
c8ba0f690d Fix --force parameter of CLI package 2019-07-19 10:00:45 +02:00
Ines Montani
a0acb1b3cd Also add infobox to API docs [ci skip] 2019-07-17 16:26:41 +02:00
Ines Montani
f97a555445 Add API documentation 2019-07-17 14:30:04 +02:00
Ines Montani
40cd03fc35 Improve EntityRuler serialization 2019-07-10 12:25:45 +02:00
Ines Montani
8721849423 Update Scorer.ents_per_type 2019-07-10 11:19:28 +02:00
Ines Montani
ebe58e7fa1 Document gold.docs_to_json [ci skip] 2019-07-10 10:27:33 +02:00
Björn Böing
205c73a589 Update tokenizer and doc init example (#3939)
* Fix Doc.to_json hyperlink

* Update tokenizer and doc init examples

* Change "matchin rules" to "punctuation rules"

* Auto-format
2019-07-10 10:16:48 +02:00
Björn Böing
04982ccc40 Update pretrain to prevent unintended overwriting of weight fil… (#3902)
* Update pretrain to prevent unintended overwriting of weight files for #3859

* Add '--epoch-start' to pretrain docs

* Add mising pretrain arguments to bash example

* Update doc tag for v2.1.5
2019-07-09 21:48:30 +02:00
Joshua Smith
2eb925bd05 Added an argument to EntityRuler constructor to pass attrs to… (#3919)
* Perserve flags in EntityRuler

The EntityRuler (explosion/spaCy#3526) does not preserve
overwrite flags (or `ent_id_sep`) when serialized.  This
commit adds support for serialization/deserialization preserving
overwrite and ent_id_sep flags.

* add signed contributor agreement

* flake8 cleanup

mostly blank line issues.

* mark test from the issue as needing a model

The test from the issue needs some language model for serialization
but the test wasn't originally marked correctly.

* Adds `phrase_matcher_attr` to allow args to PhraseMatcher

This is an added arg to pass to the `PhraseMatcher`. For example,
this allows creation of a case insensitive phrase matcher when the
`EntityRuler` is created.  References explosion/spaCy#3822

* remove unneeded model loading

The model didn't need to be loaded, and I replaced it with
a change that doesn't require it (using existings fixtures)

* updated docstring for new argument

* updated docs to reflect new argument to the EntityRuler constructor

* change tempdir handling to be compatible with python 2.7

* return conflicted code to entityruler

Some stuff got cut out because of merge conflicts, this
returns that code for the phrase_matcher_attr.

* fixed typo in the code added back after conflicts

* flake8 compliance

When I deconflicted the branch there were some flake8 issues
introduced. This resolves the spacing problems.

* test changes:  attempts to fix flaky test in python3.5

These tests seem to be alittle flaky in 3.5 so I changed the check to avoid
the comparisons that seem to be fail sometimes.
2019-07-09 20:09:17 +02:00
Guillaume Claret
d7a519a922 Typo (#3865)
* Typo

* Add contributor agreement
2019-06-20 10:31:19 +02:00
Björn Böing
ebf5a04d6c Update pretrain docs and add unsupported loss_func error (#3860)
* Add error to `get_vectors_loss` for unsupported loss function of `pretrain`

* Add missing "--loss-func" argument to pretrain docs. Update pretrain plac annotations to match docs.

* Add missing quotation marks
2019-06-20 10:30:44 +02:00
Ines Montani
81c12640ab Auto-format [ci skip] 2019-06-16 14:33:20 +02:00
Greg Werner
9041a72d7f Update tokenizer.md for construction example (#3790)
* Update tokenizer.md for construction example

Self contained example.  You should really say what nlp is so that the example will work as is

* Update CONTRIBUTOR_AGREEMENT.md

* Restore contributor agreement

* Adjust construction examples
2019-06-16 14:32:56 +02:00
BreakBB
d8573ee715 Update error raising for CLI pretrain to fix #3840 (#3843)
* Add check for empty input file to CLI pretrain

* Raise error if JSONL is not a dict or contains neither `tokens` nor `text` key

* Skip empty values for correct pretrain keys and log a counter as warning

* Add tests for CLI pretrain core function make_docs.

* Add a short hint for the `tokens` key to the CLI pretrain docs

* Add success message to CLI pretrain

* Update model loading to fix the tests

* Skip empty values and do not create docs out of it
2019-06-16 13:22:57 +02:00
Motoki Wu
9c064e6ad9 Add resume logic to spacy pretrain (#3652)
* Added ability to resume training

* Add to readmee

* Remove duplicate entry
2019-06-12 13:29:23 +02:00
Nipun Sadvilkar
1f13005751 Incorrect Token attribute ent_iob_ description (#3800)
* Incorrect Token attribute ent_iob_ description

* Add spaCy contributor agreement
2019-05-31 16:50:45 +02:00
Ramanan Balakrishnan
26c37c5a4d fix all references to BILUO annotation format (#3797) 2019-05-31 12:19:19 +02:00
Ines Montani
7634812172 Document Language.evaluate 2019-05-24 14:06:36 +02:00
Ines Montani
45e6855550 Update Language.update docs 2019-05-24 14:06:26 +02:00
Ines Montani
b78a8dc1d2 Update Scorer and add API docs 2019-05-24 14:06:04 +02:00
Ines Montani
321c9f5acc Fix lex_id docs (closes #3743) 2019-05-16 23:15:58 +02:00
Ines Montani
f96af8526a Merge branch 'spacy.io' [ci skip] 2019-05-11 23:03:56 +02:00
Ines Montani
7534f7cb44 Fix return value of Language.update (closes #3692) 2019-05-11 18:40:19 +02:00
devforfu
21af12eb53 Make "text" key in JSONL format optional when "tokens" key is provided (#3721)
* Fix issue with forcing text key when it is not required

* Extending the docs to reflect the new behavior
2019-05-11 15:41:29 +02:00
Ines Montani
6cfa1e1f47 Fix DependencyParser.predict docs (resolves #3561) 2019-05-11 15:37:54 +02:00
Ines Montani
25f5592d57 Improve Token.prob and Lexeme.prob docs (resolves #3701) 2019-05-11 15:23:41 +02:00
Ines Montani
65b55f1aaa Add version tag to --base-model argument (closes #3720) 2019-05-10 14:06:47 +02:00
Ines Montani
505c9e0e19 Add util.filter_spans helper (#3686) 2019-05-08 02:33:40 +02:00