Commit Graph

8392 Commits

Author SHA1 Message Date
Sofie Van Landeghem
8c1a23209f
Getting scores out of beam_parser (#6684)
* clean up of ner tests

* beam_parser tests

* implement get_beam_parses and scored_parses for the dep parser

* we don't have to add the parse if there are no arcs
2021-01-07 16:28:27 +11:00
Sofie Van Landeghem
3983bc6b1e
Fix Transformer width in TextCatEnsemble (#6431)
* add convenience method to determine tok2vec width in a model

* fix transformer tok2vec dimensions in TextCatEnsemble architecture

* init function should not be nested to avoid pickle issues
2021-01-06 12:44:04 +01:00
Sofie Van Landeghem
402dbc5bae
Getting scores out of beam_ner (#6575)
* small fixes and formatting

* bring test_issue4313 up-to-date, currently fails

* formatting

* add get_beam_parses method back

* add scored_ents function

* delete tag map
2021-01-06 12:02:32 +01:00
Sofie Van Landeghem
6f7e7d88b9
remove cause without apostrophe from norm exceptions (#6636) 2021-01-06 12:30:30 +08:00
Adriane Boyd
bf9096437e
Set default lemmas in retokenizer (#6667)
Instead of unsetting lemmas on retokenized tokens, set the default
lemmas to:

* merge: concatenate any existing lemmas with `SPACY` preserved
* split: use the new `ORTH` values if lemmas were previously set,
  otherwise leave unset
2021-01-06 12:29:44 +08:00
Adriane Boyd
0041dfbc7f
Use special matcher for exceptions with spaces (#6668)
Use the special cases phrase matcher for exceptions that include space
characters so that exceptions including spaces are supported.
2021-01-06 12:05:10 +08:00
Sofie Van Landeghem
afc5714d32
multi-label textcat component (#6474)
* multi-label textcat component

* formatting

* fix comment

* cleanup

* fix from #6481

* random edit to push the tests

* add explicit error when textcat is called with multi-label gold data

* fix error nr

* small fix
2021-01-06 13:07:14 +11:00
Bruno
1a77607036
spaCy v3 is not saving the best version in training loop (#6629)
* Save best only if is the best and also respect the average config

* Create bratao.md

* Update loop.py

* Remove average check

* Keep before_to_disk
2021-01-06 12:51:30 +11:00
Sofie Van Landeghem
29b59086f9
Prevent 0-length mem alloc (#6653)
* prevent 0-length mem alloc by adding asserts

* fix lexeme mem allocation
2021-01-06 12:50:17 +11:00
Ines Montani
6f83abb971
Merge pull request #6647 from svlandeg/feature/init_config_overwrite 2021-01-05 14:59:04 +11:00
Ines Montani
81f018fb67
Merge pull request #6671 from explosion/chore/tidy-autoformat
Tidy up and auto-format
2021-01-05 14:45:31 +11:00
Ines Montani
224a3590e9
Merge pull request #6654 from svlandeg/chore/tests-cleanup
Unskipping tests
2021-01-05 13:53:40 +11:00
Ines Montani
a9e845426f Use --force for consistency and add docs 2021-01-05 13:49:59 +11:00
Ines Montani
c4993f16d0
Merge pull request #6651 from svlandeg/bugfix/cli_info 2021-01-05 13:44:26 +11:00
Ines Montani
991669c934 Tidy up and auto-format 2021-01-05 13:41:53 +11:00
Adriane Boyd
b57be94c78
Fix memory issues in Language.evaluate (#6386)
* Fix memory issues in Language.evaluate

Reset annotation in predicted docs before evaluating and store all data
in `examples`.

* Minor refactor to docs generator init

* Fix generator expression

* Fix final generator check

* Refactor pipeline loop

* Handle examples generator in Language.evaluate

* Add test with generator

* Use make_doc
2020-12-31 10:45:50 +11:00
svlandeg
a6a68da673 unskipping tests with python >= 3.6 2020-12-30 18:46:43 +01:00
svlandeg
d5ff0fecf8 add docs 2020-12-30 14:01:13 +01:00
svlandeg
c74ab6a313 fix imports 2020-12-30 12:40:12 +01:00
svlandeg
712a78b74a add simple unit test 2020-12-30 12:35:26 +01:00
svlandeg
4347e6d39b fixes for CLI info command 2020-12-30 12:05:58 +01:00
svlandeg
62b4fe118f prevent overwriting existing config file 2020-12-29 15:40:22 +01:00
Adriane Boyd
5ca57d8221
Add logger warning when serializing user hooks (#6595)
Add a warning that user hooks are lost on serialization.

Add a `user_hooks` exclude to skip the warning with pickle.
2020-12-29 11:54:32 +01:00
Yosi
cf52510631
Add Amharic አማርኛ Language support (#6583)
* Add Amharic to space

* clean up

* Add some PRON_LEMMA

* add Tigrinya support

* remove text_noun_chunks

* Tigrinya Support

* added some more details for ti

* fix unit test

* add amharic char range

* changes from review

* amharic and tigrinya share same unicode block

* get rid of _amharic/_tigrinya in char_classes

Co-authored-by: Josiah Solomon <jsolomon@meteorcomm.com>
2020-12-22 16:50:34 +01:00
Tim Gates
292c1d6a73
docs: fix simple typo, speficied -> specified (#6611)
There is a small typo in spacy/cli/info.py.

Should read `specified` rather than `speficied`.
2020-12-22 09:14:10 +01:00
Adriane Boyd
cabd4ae5b1
Use logger.warning instead of logger.warn (#6596)
Use `logger.warning` instead of deprecated `logger.warn`.
2020-12-21 08:25:10 +08:00
Sofie Van Landeghem
282a3b49ea
Fix parser resizing when there is no upper layer (#6460)
* allow resizing of the parser model even when upper=False

* update from spacy.TransitionBasedParser.v1 to v2

* bugfix
2020-12-18 18:56:57 +08:00
Sofie Van Landeghem
0a923a7915
Tagger robustness (#6580)
* require labels in taggers

* ensure tagger works with incomplete data
2020-12-18 18:51:47 +08:00
Adriane Boyd
e10295c9fd
Fix memory leak when adding empty morph (#6581)
Fix lookup of empty morph in the morphology table, which fixes a memory
leak where a new morphology tag was allocated each time the empty morph
tag was added.
2020-12-18 18:51:01 +08:00
Ines Montani
e9b0963827
Merge pull request #6333 from adrianeboyd/chore/python39 2020-12-17 22:11:57 +11:00
Ines Montani
47c1ec678b Merge branch 'develop' into pr/6333 2020-12-17 10:19:28 +11:00
Ines Montani
3f90bffa27
Merge pull request #6571 from adrianeboyd/bugfix/debug-data-missing-vectors
Fix alignment and vector checks in debug data
2020-12-17 10:10:47 +11:00
Thomas Bird
cbb8c66da3 prevent the root logger from inialising 2020-12-15 19:50:34 +00:00
Adriane Boyd
1ddf2f39c7
Switch converters to generator functions (#6547)
* Switch converters to generator functions

To reduce the memory usage when converting large corpora, refactor the
convert methods to be generator functions.

* Update tests
2020-12-15 16:47:16 +08:00
Adriane Boyd
20e18cc246 Fix alignment and vector checks in debug data
* Update token alignment check to use Example alignment
* Update missing vector check further related to changes in v3
2020-12-15 09:43:14 +01:00
Matthew Honnibal
8656a08777
Add beam_parser and beam_ner components for v3 (#6369)
* Get basic beam tests working

* Get basic beam tests working

* Compile _beam_utils

* Remove prints

* Test beam density

* Beam parser seems to train

* Draft beam NER

* Upd beam

* Add hypothesis as dev dependency

* Implement missing is-gold-parse method

* Implement early update

* Fix state hashing

* Fix test

* Fix test

* Default to non-beam in parser constructor

* Improve oracle for beam

* Start refactoring beam

* Update test

* Refactor beam

* Update nn

* Refactor beam and weight by cost

* Update ner beam settings

* Update test

* Add __init__.pxd

* Upd test

* Fix test

* Upd test

* Fix test

* Remove ring buffer history from StateC

* WIP change arc-eager transitions

* Add state tests

* Support ternary sent start values

* Fix arc eager

* Fix NER

* Pass oracle cut size for beam

* Fix ner test

* Fix beam

* Improve StateC.clone

* Improve StateClass.borrow

* Work directly with StateC, not StateClass

* Remove print statements

* Fix state copy

* Improve state class

* Refactor parser oracles

* Fix arc eager oracle

* Fix arc eager oracle

* Use a vector to implement the stack

* Refactor state data structure

* Fix alignment of sent start

* Add get_aligned_sent_starts method

* Add test for ae oracle when bad sentence starts

* Fix sentence segment handling

* Avoid Reduce that inserts illegal sentence

* Update preset SBD test

* Fix test

* Remove prints

* Fix sent starts in Example

* Improve python API of StateClass

* Tweak comments and debug output of arc eager

* Upd test

* Fix state test

* Fix state test
2020-12-13 09:08:32 +08:00
Ines Montani
513c4e332a
Include custom code via spacy package command (#6531) 2020-12-10 20:36:46 +08:00
Adriane Boyd
7b277661f6 Set version to v2.3.5 2020-12-10 13:32:10 +01:00
Ines Montani
2a6043fabb
Merge pull request #6530 from explosion/feature/init-config-cpu-gpu 2020-12-10 09:38:46 +11:00
Ines Montani
9d32e839d3 Merge branch 'develop' into feature/init-config-cpu-gpu 2020-12-10 08:50:53 +11:00
Adriane Boyd
6ee6e41234 Update docstring for Language.evaluate 2020-12-09 10:21:39 +01:00
Adriane Boyd
fa8fa474a3 Add nlp.batch_size setting
Add a default `batch_size` setting for `Language.pipe` and
`Language.evaluate` as `nlp.batch_size`.
2020-12-09 09:13:26 +01:00
Ines Montani
f2571b5ec4
Merge pull request #6444 from adrianeboyd/chore/update-develop-from-master 2020-12-09 13:09:58 +11:00
Ines Montani
90171f2031
Merge pull request #6528 from svlandeg/feature/pipe_fill_config 2020-12-09 12:01:22 +11:00
Ines Montani
dfaef27f90
Merge pull request #6503 from adrianeboyd/feature/lemmatizer-rule-warning-pos
Warn on empty POS for the rule-based lemmatizer
2020-12-09 11:34:16 +11:00
Ines Montani
271923eaea Fix retokenizer 2020-12-09 11:29:55 +11:00
Ines Montani
b85bd63eca Fix test 2020-12-09 11:24:01 +11:00
Ines Montani
febf71af28 Fix test 2020-12-09 11:23:07 +11:00
Ines Montani
1da1568110 Remove tag map 2020-12-09 11:13:49 +11:00
Ines Montani
1980203229 Merge branch 'master' into pr/6444 2020-12-09 11:09:40 +11:00
Ines Montani
05a2812ae0 Merge branch 'develop' into pr/6444 2020-12-09 11:04:03 +11:00
Ines Montani
758ad6c3cd Make CPU the default for init config 2020-12-09 11:00:51 +11:00
Ines Montani
5d605d539d Remove output_file from init_config helper 2020-12-09 10:57:55 +11:00
Sofie Van Landeghem
cfc72c2995
Bugfix multi-label textcat reproducibility (#6481)
* add test for multi-label textcat reproducibility

* remove positive_label

* fix lengths dtype

* fix comments

* remove comment that we should not have forgotten :-)
2020-12-09 06:29:15 +08:00
Sofie Van Landeghem
de108ed3e8
Add specific error when StaticVectors can't read the vectors data (#6450) 2020-12-09 06:16:07 +08:00
Koichi Yasuoka
0afb54ac93
JapaneseTokenizer.pipe added (#6515)
* JapaneseTokenizer.pipe added

For [spacymoji](https://spacy.io/universe/project/spacymoji)  with `Japanese()`.

* DummyTokenizer.pipe added instead
2020-12-08 20:02:23 +01:00
svlandeg
8f8a7f1733 returning config in init_config 2020-12-08 17:37:20 +01:00
Ines Montani
8921364579
Merge pull request #6521 from explosion/feature/config-stdin
Allow reading config from stdin in spacy train
2020-12-08 22:07:43 +11:00
Ines Montani
6c7a930ee8 Fix variable 2020-12-08 20:44:59 +11:00
Ines Montani
94a5a9814f Update argument handling and documentation 2020-12-08 20:41:18 +11:00
Adriane Boyd
6c221d4841 Fix subsequent pipe detection in EntityRuler
Fix subsequent pipe detection to detect the position of the current
object by comparing the component itself rather than from the factory
name.
2020-12-08 10:01:30 +01:00
Adriane Boyd
5ceac425ee Remove non-working --use-chars from train CLI
Remove the non-working `--use-chars` option from the train CLI. The
implementation of the option across component types and the CLI settings
could be fixed, but the `CharacterEmbed` model does not work on GPU in
v2 so it's better to remove it.
2020-12-08 08:30:00 +01:00
Ines Montani
d25b1606d6 Allow reading config from sdtin in spacy train 2020-12-08 18:01:40 +11:00
Ines Montani
6cfa66ed1c
Make training.loop return nlp object and path (#6520) 2020-12-08 14:55:55 +08:00
Sofie Van Landeghem
2c27093c5f
require_cpu functionality (#6336)
* add require_cpu from Thinc 8.0.0rc2

* add docs

* fix test if cupy is not installed
2020-12-08 14:42:40 +08:00
Sofie Van Landeghem
f98a04434a
pretrain architectures (#6451)
* define new architectures for the pretraining objective

* add loss function as attr of the omdel

* cleanup

* cleanup

* shorten name

* fix typo

* remove unused error
2020-12-08 14:41:03 +08:00
Adriane Boyd
29b058ebdc
Fix spacy when retokenizing cases with affixes (#6475)
Preserve `token.spacy` corresponding to the span end token in the
original doc rather than adjusting for the current offset.

* If not modifying in place, this checks in the original document
(`doc.c` rather than `tokens`).
* If modifying in place, the document has not been modified past the
current span start position so the value at the current span end
position is valid.
2020-12-08 14:25:56 +08:00
Adriane Boyd
4448680750
Fix alignment for 1-to-1 tokens and lowercasing (#6476)
* When checking for token alignments, check not only that the tokens are
identical but that the character positions are both at the start of a
token.

  It's possible for the tokens to be identical even though the two
tokens aren't aligned one-to-one in a case like `["a'", "''"]` vs.
`["a", "''", "'"]`, where the middle tokens are identical but should not
be aligned on the token level at character position 2 since it's the
start of one token but the middle of another.

* Use the lowercased version of the token texts to create the
character-to-token alignment because lowercasing can change the string
length (e.g., for `İ`, see the not-a-bug bug report:
https://bugs.python.org/issue34723)
2020-12-08 14:25:16 +08:00
Adriane Boyd
e931d3f72b
Move max_length to nlp.make_doc() (#6512)
Move max_length check to `nlp.make_doc()` so that's it's also checked
for `nlp.pipe()`.
2020-12-08 14:24:02 +08:00
Ines Montani
ee2ec52f48
Merge pull request #6409 from svlandeg/feature/trf-docs 2020-12-08 06:32:10 +01:00
Ines Montani
82e88f0e3b
Merge pull request #6379 from svlandeg/fix/labels-constructor 2020-12-08 06:29:56 +01:00
Adriane Boyd
d70950605c Warn on empty POS for the rule-based lemmatizer
Add a warning to the rule-based lemmatizer for any tokens without POS
annotation.
2020-12-04 11:46:15 +01:00
Adriane Boyd
78085fab1f
Check for spacy-nightly package in download (#6502)
Also check for spacy-nightly in download so that `--no-deps` isn't set
for normal nightly installs.
2020-12-04 09:40:03 +01:00
Ines Montani
63f83e7034
Merge pull request #6470 from adrianeboyd/feature/license-in-package 2020-12-04 03:55:54 +01:00
Sofie Van Landeghem
d6c616a125
Fixes in test suite (#6457)
* fix slow test for textcat readers

* cleanup test_issue5551

* add explicit score weight

* cleanup
2020-12-02 12:57:08 +01:00
Adriane Boyd
31ec9a906e
Clean up 3rd party license info (#6478)
Move scikit-learn license from `Scorer` to
`licenses/3rd_party_licenses.txt`.
2020-12-02 10:15:23 +01:00
Adriane Boyd
591cd48aa8 Remove config.cfg from MANIFEST 2020-12-01 12:58:02 +01:00
Adriane Boyd
b0dd13e0ba Support LICENSE in spacy package
If present, include the file `input_dir/LICENSE` at the top level of the
packaged model.
2020-11-30 13:43:58 +01:00
Adriane Boyd
53c0fb7431
Only set NORM on Token in retokenizer (#6464)
* Only set NORM on Token in retokenizer

Instead of setting `NORM` on both the token and lexeme, set `NORM` only
on the token.

The retokenizer tries to set all possible attributes with
`Token/Lexeme.set_struct_attr` so that it doesn't have to enumerate
which attributes are available for each. `NORM` is the only attribute
that's stored on both and for most cases it doesn't make sense to set
the global norms based on a individual retokenization. For lexeme-only
attributes like `IS_STOP` there's no way to avoid the global side
effects, but I think that `NORM` would be better only on the token.

* Fix test
2020-11-30 09:35:42 +08:00
Adriane Boyd
03ae77e603
Add SPACY as a Matcher attribute (#6463) 2020-11-30 09:34:50 +08:00
Sofie Van Landeghem
079f6ea474
avoid resolving the full config (#6465) 2020-11-30 09:34:29 +08:00
Ines Montani
9beba7164f Make jinja2 top-level import
No problem anymore since it's now an official dependency
2020-11-27 15:17:14 +08:00
Adriane Boyd
26296ab223
Add error message if DocBin zlib decompress fails (#6394)
Add a better error message if DocBin zlib decompress fails, indicating
that the data is not in `DocBin` format.
2020-11-27 14:39:49 +08:00
Adriane Boyd
3a5cc5f8b4 Set version to v2.3.4 2020-11-26 08:48:52 +01:00
Adriane Boyd
e0f5646a4a
Restore cleanup_beam method (#6446) 2020-11-25 13:21:48 +01:00
Adriane Boyd
cf693f0eae Fix token_match in tokenizer 2020-11-25 11:49:34 +01:00
Adriane Boyd
724831b066 Merge remote-tracking branch 'upstream/master' into chore/update-develop-from-master
* Update Macedonian for v3
* Update Turkish for v3
2020-11-25 11:49:34 +01:00
Adriane Boyd
573f5c863f
Fix tag map clobbering in spacy train (#6437)
Fix bug from #5768 where the tag map is clobbered if a custom tag map
isn't provided.
2020-11-24 13:13:16 +01:00
Adriane Boyd
ce18fc6588 Set version to v2.3.3 2020-11-24 10:03:45 +01:00
Adriane Boyd
cd61d264ef Set version to v2.3.3.dev0 2020-11-23 13:51:59 +01:00
Sofie Van Landeghem
2af31a8c8d
Bugfix textcat reproducibility on GPU (#6411)
* add seed argument to ParametricAttention layer

* bump thinc to 7.4.3

* set thinc version range

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2020-11-23 12:29:35 +01:00
Adriane Boyd
3f61f5eb54
Use int8_t instead of char in Matcher (#6413)
* Use signed char instead of char in Matcher

Remove unused char* utf8_t typedef

* Use int8_t instead of signed char
2020-11-23 10:26:47 +01:00
Adriane Boyd
4284605683
Remove Beam cleanup (#6414)
Beam cleanup is handled through the Beam finalization method.
2020-11-23 10:01:46 +01:00
Adriane Boyd
a8c2dad466
Add all vectors to vocab before pruning (#6408)
Add all vectors to the vocab before pruning to correct the selection of
vectors to prioritize.
2020-11-23 10:00:59 +01:00
svlandeg
636be3c791 Merge remote-tracking branch 'upstream/develop' into feature/trf-docs 2020-11-19 14:15:35 +01:00
svlandeg
73fc1ed963 remove labels from morphologizer constructor 2020-11-11 21:48:50 +01:00
svlandeg
d5a920325f remove labels from constructor 2020-11-11 21:34:12 +01:00
Adriane Boyd
320a8b1481
Add ent_id_ to strings serialized with Doc (#6353) 2020-11-10 20:16:07 +08:00
Adriane Boyd
a7e7d6c6c9
Ignore misaligned in Morphologizer.get_loss (#6363)
Fix bug where `Morphologizer.get_loss` treated misaligned annotation as
`EMPTY_MORPH` rather than ignoring it. Remove unneeded default `EMPTY_MORPH`
mappings.
2020-11-10 20:15:09 +08:00
Sofie Van Landeghem
a0c899a0ff
Fix textcat + transformer architecture (#6371)
* add pooling to textcat TransformerListener

* maybe_get_dim in case it's null
2020-11-10 20:14:47 +08:00