Commit Graph

118 Commits

Author SHA1 Message Date
Ines Montani
db55577c45
Drop Python 2.7 and 3.5 (#4828)
* Remove unicode declarations

* Remove Python 3.5 and 2.7 from CI

* Don't require pathlib

* Replace compat helpers

* Remove OrderedDict

* Use f-strings

* Set Cython compiler language level

* Fix typo

* Re-add OrderedDict for Table

* Update setup.cfg

* Revert CONTRIBUTING.md

* Revert lookups.md

* Revert top-level.md

* Small adjustments and docs [ci skip]
2019-12-22 01:53:56 +01:00
Ines Montani
947dba7141 Merge branch 'master' into develop 2019-12-21 19:04:43 +01:00
Ines Montani
cb4145adc7 Tidy up and auto-format 2019-12-21 19:04:17 +01:00
Ines Montani
158b98a3ef Merge branch 'master' into develop 2019-12-21 18:55:03 +01:00
adrianeboyd
2d8c6e1124 Iterate over lr_edges until sents are correct (#4702)
Iterate over lr_edges until all heads are within the current sentence.
Instead of iterating over them for a fixed number of iterations, check
whether the sentence boundaries are correct for the heads and stop when
all are correct. Stop after a maximum of 10 iterations, providing a
warning in this case since the sentence boundaries may not be correct.
2019-11-25 13:06:36 +01:00
Ines Montani
5bf9ab5b03 Tidy up and auto-format 2019-11-20 13:16:33 +01:00
Matthew Honnibal
4b123952aa
Add option for improved NER feature extraction (#4671)
* Support option of three NER features

* Expose nr_feature parser model setting

* Give feature tokens better name

* Test nr_feature=3 for NER

* Format
2019-11-19 15:03:14 +01:00
Sofie Van Landeghem
e48a09df4e Example class for training data (#4543)
* OrigAnnot class instead of gold.orig_annot list of zipped tuples

* from_orig to replace from_annot_tuples

* rename to RawAnnot

* some unit tests for GoldParse creation and internal format

* removing orig_annot and switching to lists instead of tuple

* rewriting tuples to use RawAnnot (+ debug statements, WIP)

* fix pop() changing the data

* small fixes

* pop-append fixes

* return RawAnnot for existing GoldParse to have uniform interface

* clean up imports

* fix merge_sents

* add unit test for 4402 with new structure (not working yet)

* introduce DocAnnot

* typo fixes

* add unit test for merge_sents

* rename from_orig to from_raw

* fixing unit tests

* fix nn parser

* read_annots to produce text, doc_annot pairs

* _make_golds fix

* rename golds_to_gold_annots

* small fixes

* fix encoding

* have golds_to_gold_annots use DocAnnot

* missed a spot

* merge_sents as function in DocAnnot

* allow specifying only part of the token-level annotations

* refactor with Example class + underlying dicts

* pipeline components to work with Example objects (wip)

* input checking

* fix yielding

* fix calls to update

* small fixes

* fix scorer unit test with new format

* fix kwargs order

* fixes for ud and conllu scripts

* fix reading data for conllu script

* add in proper errors (not fixed numbering yet to avoid merge conflicts)

* fixing few more small bugs

* fix EL script
2019-11-11 17:35:27 +01:00
Ines Montani
181c01f629 Tidy up and auto-format 2019-10-18 11:27:38 +02:00
Ines Montani
3d8fd4b461 Revert #4334 2019-09-29 17:32:12 +02:00
Ines Montani
c9cd516d96 Move tests out of package (#4334)
* Move tests out of package

* Fix typo
2019-09-28 18:05:00 +02:00
Ines Montani
9bf69bfbb2 Remove test 2019-09-19 17:38:41 +02:00
Matthew Honnibal
46c02d25b1 Merge changes to test_ner 2019-09-18 21:41:24 +02:00
Sofie Van Landeghem
de5a9ecdf3 Distinction between outside, missing and blocked NER annotations (#4307)
* remove duplicate unit test

* unit test (currently failing) for issue 4267

* bugfix: ensure doc.ents preserves kb_id annotations

* fix in setting doc.ents with empty label

* rename

* test for presetting an entity to a certain type

* allow overwriting Outside + blocking presets

* fix actions when previous label needs to be kept

* fix default ent_iob in set entities

* cleaner solution with U- action

* remove debugging print statements

* unit tests with explicit transitions and is_valid testing

* remove U- from move_names explicitly

* remove unit tests with pre-trained models that don't work

* remove (working) unit tests with pre-trained models

* clean up unit tests

* move unit tests

* small fixes

* remove two TODO's from doc.ents comments
2019-09-18 21:37:17 +02:00
Ines Montani
655b434553 Merge branch 'master' into develop 2019-09-12 11:39:18 +02:00
Ines Montani
8ebc3711dc Fix bug in Parser.labels and add test (#4275) 2019-09-11 18:29:35 +02:00
Ines Montani
af25323653 Tidy up and auto-format 2019-09-11 14:00:36 +02:00
Matthew Honnibal
3c1c0ec18e Add tests for NER oracle with whitespace 2019-08-29 14:33:39 +02:00
Matthew Honnibal
d9a07a7f6e
💫 Fix class mismap on parser deserializing (closes #3433) (#3470)
v2.1 introduced a regression when deserializing the parser after
parser.add_label() had been called. The code around the class mapping is
pretty confusing currently, as it was written to accommodate backwards
model compatibility. It needs to be revised when the models are next
retrained.

Closes #3433
2019-03-23 13:46:25 +01:00
Matthew Honnibal
444a3abfe5 Add xfail test for #3433. Improve test for add label. 2019-03-23 12:36:00 +01:00
Ines Montani
5651a0d052 💫 Replace {Doc,Span}.merge with Doc.retokenize (#3280)
* Add deprecation warning to Doc.merge and Span.merge

* Replace {Doc,Span}.merge with Doc.retokenize
2019-02-15 10:29:44 +01:00
Ines Montani
323fc26880 Tidy up and format remaining files 2018-11-30 17:43:08 +01:00
Ines Montani
b6e991440c 💫 Tidy up and auto-format tests (#2967)
* Auto-format tests with black

* Add flake8 config

* Tidy up and remove unused imports

* Fix redefinitions of test functions

* Replace orths_and_spaces with words and spaces

* Fix compatibility with pytest 4.0

* xfail test for now

Test was previously overwritten by following test due to naming conflict, so failure wasn't reported

* Unfail passing test

* Only use fixture via arguments

Fixes pytest 4.0 compatibility
2018-11-27 01:09:36 +01:00
Matthew Honnibal
6e749d3c70 Skip flakey parser test 2018-08-15 15:37:04 +02:00
Ines Montani
75f3234404
💫 Refactor test suite (#2568)
## Description

Related issues: #2379 (should be fixed by separating model tests)

* **total execution time down from > 300 seconds to under 60 seconds** 🎉
* removed all model-specific tests that could only really be run manually anyway – those will now live in a separate test suite in the [`spacy-models`](https://github.com/explosion/spacy-models) repository and are already integrated into our new model training infrastructure
* changed all relative imports to absolute imports to prepare for moving the test suite from `/spacy/tests` to `/tests` (it'll now always test against the installed version)
* merged old regression tests into collections, e.g. `test_issue1001-1500.py` (about 90% of the regression tests are very short anyways)
* tidied up and rewrote existing tests wherever possible

### Todo

- [ ] move tests to `/tests` and adjust CI commands accordingly
- [x] move model test suite from internal repo to `spacy-models`
- [x] ~~investigate why `pipeline/test_textcat.py` is flakey~~
- [x] review old regression tests (leftover files) and see if they can be merged, simplified or deleted
- [ ] update documentation on how to run tests


### Types of change
enhancement, tests

## Checklist
<!--- Before you submit the PR, go over this checklist and make sure you can
tick off all the boxes. [] -> [x] -->
- [x] I have submitted the spaCy Contributor Agreement.
- [x] I ran the tests, and all new and existing tests passed.
- [ ] My changes don't require a change to the documentation, or if they do, I've added all required information.
2018-07-24 23:38:44 +02:00
Matthew Honnibal
8661218fe8
Refactor parser (#2308)
* Work on refactoring greedy parser

* Compile updated parser

* Fix refactored parser

* Update test

* Fix refactored parser

* Fix refactored parser

* Readd beam search after refactor

* Fix beam search after refactor

* Fix parser

* Fix beam parsing

* Support oracle segmentation in ud-train CLI command

* Avoid relying on final gold check in beam search

* Add a keyword argument sink to GoldParse

* Bug fixes to beam search after refactor

* Avoid importing fused token symbol in ud-run-test, untl that's added

* Avoid importing fused token symbol in ud-run-test, untl that's added

* Don't modify Token in global scope

* Fix error in beam gradient calculation

* Default to beam_update_prob 1

* Set a more aggressive threshold on the max violn update

* Disable some tests to figure out why CI fails

* Disable some tests to figure out why CI fails

* Add some diagnostics to travis.yml to try to figure out why build fails

* Tell Thinc to link against system blas on Travis

* Point thinc to libblas on Travis

* Try running sudo=true for travis

* Unhack travis.sh

* Restore beam_density argument for parser beam

* Require thinc 6.11.1.dev16

* Revert hacks to tests

* Revert hacks to travis.yml

* Update thinc requirement

* Fix parser model loading

* Fix size limits in training data

* Add missing name attribute for parser

* Fix appveyor for Windows
2018-05-15 22:17:29 +02:00
Matthew Honnibal
b43bfd3524 Fix arc-eager oracle tests 2018-05-01 16:16:14 +02:00
Matthew Honnibal
adbb1f7533 Add better arc-eager oracle tests 2018-05-01 15:14:55 +02:00
Matthew Honnibal
1f7229f40f Revert "Merge branch 'develop' of https://github.com/explosion/spaCy into develop"
This reverts commit c9ba3d3c2d, reversing
changes made to 92c26a35d4.
2018-03-27 19:23:02 +02:00
Matthew Honnibal
f5b1ad4100 Limit parser model size, to hopefully reduce memory during CI tests 2018-01-28 21:00:32 +01:00
Matthew Honnibal
00435d8f0c Add extra beam parsing test 2017-11-05 14:39:57 +01:00
Matthew Honnibal
711278b667 Make test less flakey 2017-11-03 14:36:08 +01:00
Matthew Honnibal
64e4ff7c4b Merge 'tidy-up' changes into branch. Resolve conflicts 2017-10-28 13:16:06 +02:00
Matthew Honnibal
b0f3ea2200 Fix names of pipeline components
NeuralDependencyParser --> DependencyParser
NeuralEntityRecognizer --> EntityRecognizer
TokenVectorEncoder     --> Tensorizer
NeuralLabeller         --> MultitaskObjective
2017-10-26 12:38:23 +02:00
Matthew Honnibal
4174477161 Fix equality check in test 2017-10-16 19:50:35 +02:00
Matthew Honnibal
462caf835a Fix SBD test 2017-10-12 21:18:22 +02:00
Matthew Honnibal
fd47f8e89f Fix failing test 2017-10-11 08:38:34 +02:00
Matthew Honnibal
d84136b4a9 Update add label test 2017-10-10 22:57:41 +02:00
Matthew Honnibal
09d61ada5e Merge pull request #1396 from explosion/feature/pipeline-management
💫 Improve pipeline and factory management
2017-10-10 04:29:54 +02:00
Matthew Honnibal
d8a2506023 Merge pull request #1401 from explosion/feature/add-parser-action
💫 Allow labels to be added to pre-trained parser and NER modes
2017-10-09 04:57:51 +02:00
Matthew Honnibal
689349e32f Merge pull request #1400 from explosion/feature/sentence-parsing
💫 Force parser to respect preset sentence boundaries
2017-10-09 04:31:43 +02:00
Matthew Honnibal
fad2b8315f Merge branch 'develop' into feature/add-parser-action 2017-10-09 04:13:04 +02:00
Matthew Honnibal
6c79841c0d Fix tests for history features 2017-10-09 04:12:24 +02:00
Matthew Honnibal
dde87e6b0d Add tests for adding parser actions 2017-10-09 03:42:35 +02:00
Matthew Honnibal
81a64119db Fix string-to-unicode problem 2017-10-09 00:59:49 +02:00
Matthew Honnibal
02c2af7119 Fix test 2017-10-09 00:29:37 +02:00
Matthew Honnibal
5a67efeccc Add tests for sentence segmentation presetting 2017-10-09 00:02:23 +02:00
ines
0adadcb3f0 Fix beam parse model test 2017-10-07 02:15:15 +02:00
Matthew Honnibal
20193371f5 Don't share CNN, to reduce complexities 2017-09-21 14:59:48 +02:00
Matthew Honnibal
c013e5996f Fix parser test 2017-09-17 13:13:20 -05:00