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249b97184d
* fixing argument order for rehearse * rehearse test for ner and tagger * rehearse bugfix * added test for parser * test for multilabel textcat * rehearse fix * remove debug line * Update spacy/tests/training/test_rehearse.py Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com> * Update spacy/tests/training/test_rehearse.py Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com> Co-authored-by: Kádár Ákos <akos@onyx.uvt.nl> Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
401 lines
14 KiB
Python
401 lines
14 KiB
Python
from typing import Iterable, Tuple, Optional, Dict, List, Callable, Any
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from thinc.api import get_array_module, Model, Optimizer, set_dropout_rate, Config
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from thinc.types import Floats2d
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import numpy
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from itertools import islice
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from .trainable_pipe import TrainablePipe
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from ..language import Language
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from ..training import Example, validate_examples, validate_get_examples
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from ..errors import Errors
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from ..scorer import Scorer
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from ..tokens import Doc
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from ..util import registry
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from ..vocab import Vocab
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single_label_default_config = """
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[model]
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@architectures = "spacy.TextCatEnsemble.v2"
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[model.tok2vec]
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@architectures = "spacy.Tok2Vec.v2"
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[model.tok2vec.embed]
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@architectures = "spacy.MultiHashEmbed.v2"
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width = 64
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rows = [2000, 2000, 1000, 1000, 1000, 1000]
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attrs = ["ORTH", "LOWER", "PREFIX", "SUFFIX", "SHAPE", "ID"]
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include_static_vectors = false
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[model.tok2vec.encode]
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@architectures = "spacy.MaxoutWindowEncoder.v2"
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width = ${model.tok2vec.embed.width}
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window_size = 1
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maxout_pieces = 3
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depth = 2
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[model.linear_model]
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@architectures = "spacy.TextCatBOW.v2"
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exclusive_classes = true
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ngram_size = 1
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no_output_layer = false
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"""
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DEFAULT_SINGLE_TEXTCAT_MODEL = Config().from_str(single_label_default_config)["model"]
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single_label_bow_config = """
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[model]
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@architectures = "spacy.TextCatBOW.v2"
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exclusive_classes = true
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ngram_size = 1
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no_output_layer = false
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"""
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single_label_cnn_config = """
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[model]
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@architectures = "spacy.TextCatCNN.v2"
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exclusive_classes = true
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[model.tok2vec]
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@architectures = "spacy.HashEmbedCNN.v2"
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pretrained_vectors = null
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width = 96
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depth = 4
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embed_size = 2000
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window_size = 1
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maxout_pieces = 3
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subword_features = true
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"""
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@Language.factory(
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"textcat",
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assigns=["doc.cats"],
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default_config={
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"threshold": 0.5,
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"model": DEFAULT_SINGLE_TEXTCAT_MODEL,
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"scorer": {"@scorers": "spacy.textcat_scorer.v1"},
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},
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default_score_weights={
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"cats_score": 1.0,
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"cats_score_desc": None,
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"cats_micro_p": None,
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"cats_micro_r": None,
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"cats_micro_f": None,
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"cats_macro_p": None,
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"cats_macro_r": None,
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"cats_macro_f": None,
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"cats_macro_auc": None,
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"cats_f_per_type": None,
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"cats_macro_auc_per_type": None,
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},
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)
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def make_textcat(
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nlp: Language,
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name: str,
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model: Model[List[Doc], List[Floats2d]],
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threshold: float,
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scorer: Optional[Callable],
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) -> "TextCategorizer":
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"""Create a TextCategorizer component. The text categorizer predicts categories
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over a whole document. It can learn one or more labels, and the labels are considered
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to be mutually exclusive (i.e. one true label per doc).
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model (Model[List[Doc], List[Floats2d]]): A model instance that predicts
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scores for each category.
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threshold (float): Cutoff to consider a prediction "positive".
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scorer (Optional[Callable]): The scoring method.
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"""
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return TextCategorizer(nlp.vocab, model, name, threshold=threshold, scorer=scorer)
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def textcat_score(examples: Iterable[Example], **kwargs) -> Dict[str, Any]:
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return Scorer.score_cats(
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examples,
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"cats",
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multi_label=False,
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**kwargs,
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)
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@registry.scorers("spacy.textcat_scorer.v1")
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def make_textcat_scorer():
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return textcat_score
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class TextCategorizer(TrainablePipe):
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"""Pipeline component for single-label text classification.
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DOCS: https://spacy.io/api/textcategorizer
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"""
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def __init__(
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self,
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vocab: Vocab,
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model: Model,
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name: str = "textcat",
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*,
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threshold: float,
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scorer: Optional[Callable] = textcat_score,
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) -> None:
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"""Initialize a text categorizer for single-label classification.
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vocab (Vocab): The shared vocabulary.
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model (thinc.api.Model): The Thinc Model powering the pipeline component.
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name (str): The component instance name, used to add entries to the
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losses during training.
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threshold (float): Cutoff to consider a prediction "positive".
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scorer (Optional[Callable]): The scoring method. Defaults to
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Scorer.score_cats for the attribute "cats".
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DOCS: https://spacy.io/api/textcategorizer#init
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"""
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self.vocab = vocab
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self.model = model
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self.name = name
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self._rehearsal_model = None
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cfg = {"labels": [], "threshold": threshold, "positive_label": None}
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self.cfg = dict(cfg)
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self.scorer = scorer
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@property
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def support_missing_values(self):
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# There are no missing values as the textcat should always
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# predict exactly one label. All other labels are 0.0
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# Subclasses may override this property to change internal behaviour.
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return False
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@property
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def labels(self) -> Tuple[str]:
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"""RETURNS (Tuple[str]): The labels currently added to the component.
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DOCS: https://spacy.io/api/textcategorizer#labels
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"""
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return tuple(self.cfg["labels"]) # type: ignore[arg-type, return-value]
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@property
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def label_data(self) -> List[str]:
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"""RETURNS (List[str]): Information about the component's labels.
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DOCS: https://spacy.io/api/textcategorizer#label_data
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"""
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return self.labels # type: ignore[return-value]
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def predict(self, docs: Iterable[Doc]):
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"""Apply the pipeline's model to a batch of docs, without modifying them.
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docs (Iterable[Doc]): The documents to predict.
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RETURNS: The models prediction for each document.
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DOCS: https://spacy.io/api/textcategorizer#predict
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"""
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if not any(len(doc) for doc in docs):
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# Handle cases where there are no tokens in any docs.
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tensors = [doc.tensor for doc in docs]
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xp = get_array_module(tensors)
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scores = xp.zeros((len(list(docs)), len(self.labels)))
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return scores
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scores = self.model.predict(docs)
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scores = self.model.ops.asarray(scores)
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return scores
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def set_annotations(self, docs: Iterable[Doc], scores) -> None:
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"""Modify a batch of Doc objects, using pre-computed scores.
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docs (Iterable[Doc]): The documents to modify.
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scores: The scores to set, produced by TextCategorizer.predict.
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DOCS: https://spacy.io/api/textcategorizer#set_annotations
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"""
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for i, doc in enumerate(docs):
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for j, label in enumerate(self.labels):
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doc.cats[label] = float(scores[i, j])
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def update(
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self,
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examples: Iterable[Example],
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*,
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drop: float = 0.0,
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sgd: Optional[Optimizer] = None,
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losses: Optional[Dict[str, float]] = None,
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) -> Dict[str, float]:
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"""Learn from a batch of documents and gold-standard information,
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updating the pipe's model. Delegates to predict and get_loss.
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examples (Iterable[Example]): A batch of Example objects.
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drop (float): The dropout rate.
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sgd (thinc.api.Optimizer): The optimizer.
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losses (Dict[str, float]): Optional record of the loss during training.
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Updated using the component name as the key.
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RETURNS (Dict[str, float]): The updated losses dictionary.
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DOCS: https://spacy.io/api/textcategorizer#update
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"""
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if losses is None:
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losses = {}
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losses.setdefault(self.name, 0.0)
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validate_examples(examples, "TextCategorizer.update")
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self._validate_categories(examples)
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if not any(len(eg.predicted) if eg.predicted else 0 for eg in examples):
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# Handle cases where there are no tokens in any docs.
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return losses
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set_dropout_rate(self.model, drop)
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scores, bp_scores = self.model.begin_update([eg.predicted for eg in examples])
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loss, d_scores = self.get_loss(examples, scores)
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bp_scores(d_scores)
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if sgd is not None:
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self.finish_update(sgd)
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losses[self.name] += loss
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return losses
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def rehearse(
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self,
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examples: Iterable[Example],
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*,
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drop: float = 0.0,
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sgd: Optional[Optimizer] = None,
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losses: Optional[Dict[str, float]] = None,
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) -> Dict[str, float]:
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"""Perform a "rehearsal" update from a batch of data. Rehearsal updates
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teach the current model to make predictions similar to an initial model,
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to try to address the "catastrophic forgetting" problem. This feature is
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experimental.
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examples (Iterable[Example]): A batch of Example objects.
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drop (float): The dropout rate.
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sgd (thinc.api.Optimizer): The optimizer.
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losses (Dict[str, float]): Optional record of the loss during training.
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Updated using the component name as the key.
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RETURNS (Dict[str, float]): The updated losses dictionary.
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DOCS: https://spacy.io/api/textcategorizer#rehearse
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"""
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if losses is None:
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losses = {}
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losses.setdefault(self.name, 0.0)
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if self._rehearsal_model is None:
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return losses
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validate_examples(examples, "TextCategorizer.rehearse")
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self._validate_categories(examples)
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docs = [eg.predicted for eg in examples]
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if not any(len(doc) for doc in docs):
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# Handle cases where there are no tokens in any docs.
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return losses
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set_dropout_rate(self.model, drop)
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scores, bp_scores = self.model.begin_update(docs)
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target, _ = self._rehearsal_model.begin_update(docs)
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gradient = scores - target
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bp_scores(gradient)
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if sgd is not None:
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self.finish_update(sgd)
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losses[self.name] += (gradient**2).sum()
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return losses
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def _examples_to_truth(
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self, examples: Iterable[Example]
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) -> Tuple[numpy.ndarray, numpy.ndarray]:
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nr_examples = len(list(examples))
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truths = numpy.zeros((nr_examples, len(self.labels)), dtype="f")
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not_missing = numpy.ones((nr_examples, len(self.labels)), dtype="f")
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for i, eg in enumerate(examples):
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for j, label in enumerate(self.labels):
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if label in eg.reference.cats:
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truths[i, j] = eg.reference.cats[label]
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elif self.support_missing_values:
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not_missing[i, j] = 0.0
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truths = self.model.ops.asarray(truths) # type: ignore
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return truths, not_missing # type: ignore
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def get_loss(self, examples: Iterable[Example], scores) -> Tuple[float, float]:
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"""Find the loss and gradient of loss for the batch of documents and
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their predicted scores.
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examples (Iterable[Examples]): The batch of examples.
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scores: Scores representing the model's predictions.
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RETURNS (Tuple[float, float]): The loss and the gradient.
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DOCS: https://spacy.io/api/textcategorizer#get_loss
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"""
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validate_examples(examples, "TextCategorizer.get_loss")
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self._validate_categories(examples)
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truths, not_missing = self._examples_to_truth(examples)
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not_missing = self.model.ops.asarray(not_missing) # type: ignore
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d_scores = scores - truths
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d_scores *= not_missing
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mean_square_error = (d_scores**2).mean()
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return float(mean_square_error), d_scores
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def add_label(self, label: str) -> int:
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"""Add a new label to the pipe.
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label (str): The label to add.
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RETURNS (int): 0 if label is already present, otherwise 1.
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DOCS: https://spacy.io/api/textcategorizer#add_label
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"""
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if not isinstance(label, str):
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raise ValueError(Errors.E187)
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if label in self.labels:
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return 0
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self._allow_extra_label()
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self.cfg["labels"].append(label) # type: ignore[attr-defined]
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if self.model and "resize_output" in self.model.attrs:
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self.model = self.model.attrs["resize_output"](self.model, len(self.labels))
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self.vocab.strings.add(label)
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return 1
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def initialize(
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self,
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get_examples: Callable[[], Iterable[Example]],
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*,
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nlp: Optional[Language] = None,
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labels: Optional[Iterable[str]] = None,
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positive_label: Optional[str] = None,
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) -> None:
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"""Initialize the pipe for training, using a representative set
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of data examples.
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get_examples (Callable[[], Iterable[Example]]): Function that
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returns a representative sample of gold-standard Example objects.
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nlp (Language): The current nlp object the component is part of.
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labels (Optional[Iterable[str]]): The labels to add to the component, typically generated by the
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`init labels` command. If no labels are provided, the get_examples
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callback is used to extract the labels from the data.
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positive_label (Optional[str]): The positive label for a binary task with exclusive classes,
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`None` otherwise and by default.
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DOCS: https://spacy.io/api/textcategorizer#initialize
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"""
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validate_get_examples(get_examples, "TextCategorizer.initialize")
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self._validate_categories(get_examples())
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if labels is None:
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for example in get_examples():
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for cat in example.y.cats:
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self.add_label(cat)
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else:
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for label in labels:
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self.add_label(label)
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if len(self.labels) < 2:
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raise ValueError(Errors.E867)
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if positive_label is not None:
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if positive_label not in self.labels:
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err = Errors.E920.format(pos_label=positive_label, labels=self.labels)
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raise ValueError(err)
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if len(self.labels) != 2:
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err = Errors.E919.format(pos_label=positive_label, labels=self.labels)
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raise ValueError(err)
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self.cfg["positive_label"] = positive_label
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subbatch = list(islice(get_examples(), 10))
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doc_sample = [eg.reference for eg in subbatch]
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label_sample, _ = self._examples_to_truth(subbatch)
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self._require_labels()
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assert len(doc_sample) > 0, Errors.E923.format(name=self.name)
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assert len(label_sample) > 0, Errors.E923.format(name=self.name)
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self.model.initialize(X=doc_sample, Y=label_sample)
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def _validate_categories(self, examples: Iterable[Example]):
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"""Check whether the provided examples all have single-label cats annotations."""
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for ex in examples:
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if list(ex.reference.cats.values()).count(1.0) > 1:
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raise ValueError(Errors.E895.format(value=ex.reference.cats))
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