spaCy/spacy/tests/parser/test_parse.py
Ines Montani 43b960c01b
Refactor pipeline components, config and language data (#5759)
* Update with WIP

* Update with WIP

* Update with pipeline serialization

* Update types and pipe factories

* Add deep merge, tidy up and add tests

* Fix pipe creation from config

* Don't validate default configs on load

* Update spacy/language.py

Co-authored-by: Ines Montani <ines@ines.io>

* Adjust factory/component meta error

* Clean up factory args and remove defaults

* Add test for failing empty dict defaults

* Update pipeline handling and methods

* provide KB as registry function instead of as object

* small change in test to make functionality more clear

* update example script for EL configuration

* Fix typo

* Simplify test

* Simplify test

* splitting pipes.pyx into separate files

* moving default configs to each component file

* fix batch_size type

* removing default values from component constructors where possible (TODO: test 4725)

* skip instead of xfail

* Add test for config -> nlp with multiple instances

* pipeline.pipes -> pipeline.pipe

* Tidy up, document, remove kwargs

* small cleanup/generalization for Tok2VecListener

* use DEFAULT_UPSTREAM field

* revert to avoid circular imports

* Fix tests

* Replace deprecated arg

* Make model dirs require config

* fix pickling of keyword-only arguments in constructor

* WIP: clean up and integrate full config

* Add helper to handle function args more reliably

Now also includes keyword-only args

* Fix config composition and serialization

* Improve config debugging and add visual diff

* Remove unused defaults and fix type

* Remove pipeline and factories from meta

* Update spacy/default_config.cfg

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Update spacy/default_config.cfg

* small UX edits

* avoid printing stack trace for debug CLI commands

* Add support for language-specific factories

* specify the section of the config which holds the model to debug

* WIP: add Language.from_config

* Update with language data refactor WIP

* Auto-format

* Add backwards-compat handling for Language.factories

* Update morphologizer.pyx

* Fix morphologizer

* Update and simplify lemmatizers

* Fix Japanese tests

* Port over tagger changes

* Fix Chinese and tests

* Update to latest Thinc

* WIP: xfail first Russian lemmatizer test

* Fix component-specific overrides

* fix nO for output layers in debug_model

* Fix default value

* Fix tests and don't pass objects in config

* Fix deep merging

* Fix lemma lookup data registry

Only load the lookups if an entry is available in the registry (and if spacy-lookups-data is installed)

* Add types

* Add Vocab.from_config

* Fix typo

* Fix tests

* Make config copying more elegant

* Fix pipe analysis

* Fix lemmatizers and is_base_form

* WIP: move language defaults to config

* Fix morphology type

* Fix vocab

* Remove comment

* Update to latest Thinc

* Add morph rules to config

* Tidy up

* Remove set_morphology option from tagger factory

* Hack use_gpu

* Move [pipeline] to top-level block and make [nlp.pipeline] list

Allows separating component blocks from component order – otherwise, ordering the config would mean a changed component order, which is bad. Also allows initial config to define more components and not use all of them

* Fix use_gpu and resume in CLI

* Auto-format

* Remove resume from config

* Fix formatting and error

* [pipeline] -> [components]

* Fix types

* Fix tagger test: requires set_morphology?

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
Co-authored-by: svlandeg <sofie.vanlandeghem@gmail.com>
Co-authored-by: Matthew Honnibal <honnibal+gh@gmail.com>
2020-07-22 13:42:59 +02:00

218 lines
7.5 KiB
Python

import pytest
from spacy.lang.en import English
from ..util import get_doc, apply_transition_sequence, make_tempdir
from ... import util
from ...gold import Example
TRAIN_DATA = [
(
"They trade mortgage-backed securities.",
{
"heads": [1, 1, 4, 4, 5, 1, 1],
"deps": ["nsubj", "ROOT", "compound", "punct", "nmod", "dobj", "punct"],
},
),
(
"I like London and Berlin.",
{
"heads": [1, 1, 1, 2, 2, 1],
"deps": ["nsubj", "ROOT", "dobj", "cc", "conj", "punct"],
},
),
]
def test_parser_root(en_tokenizer):
text = "i don't have other assistance"
heads = [3, 2, 1, 0, 1, -2]
deps = ["nsubj", "aux", "neg", "ROOT", "amod", "dobj"]
tokens = en_tokenizer(text)
doc = get_doc(tokens.vocab, words=[t.text for t in tokens], heads=heads, deps=deps)
for t in doc:
assert t.dep != 0, t.text
@pytest.mark.skip(reason="The step_through API was removed (but should be brought back)")
@pytest.mark.parametrize("text", ["Hello"])
def test_parser_parse_one_word_sentence(en_tokenizer, en_parser, text):
tokens = en_tokenizer(text)
doc = get_doc(
tokens.vocab, words=[t.text for t in tokens], heads=[0], deps=["ROOT"]
)
assert len(doc) == 1
with en_parser.step_through(doc) as _: # noqa: F841
pass
assert doc[0].dep != 0
@pytest.mark.skip(reason="The step_through API was removed (but should be brought back)")
def test_parser_initial(en_tokenizer, en_parser):
text = "I ate the pizza with anchovies."
# heads = [1, 0, 1, -2, -3, -1, -5]
transition = ["L-nsubj", "S", "L-det"]
tokens = en_tokenizer(text)
apply_transition_sequence(en_parser, tokens, transition)
assert tokens[0].head.i == 1
assert tokens[1].head.i == 1
assert tokens[2].head.i == 3
assert tokens[3].head.i == 3
def test_parser_parse_subtrees(en_tokenizer, en_parser):
text = "The four wheels on the bus turned quickly"
heads = [2, 1, 4, -1, 1, -2, 0, -1]
tokens = en_tokenizer(text)
doc = get_doc(tokens.vocab, words=[t.text for t in tokens], heads=heads)
assert len(list(doc[2].lefts)) == 2
assert len(list(doc[2].rights)) == 1
assert len(list(doc[2].children)) == 3
assert len(list(doc[5].lefts)) == 1
assert len(list(doc[5].rights)) == 0
assert len(list(doc[5].children)) == 1
assert len(list(doc[2].subtree)) == 6
def test_parser_merge_pp(en_tokenizer):
text = "A phrase with another phrase occurs"
heads = [1, 4, -1, 1, -2, 0]
deps = ["det", "nsubj", "prep", "det", "pobj", "ROOT"]
tags = ["DT", "NN", "IN", "DT", "NN", "VBZ"]
tokens = en_tokenizer(text)
doc = get_doc(
tokens.vocab, words=[t.text for t in tokens], deps=deps, heads=heads, tags=tags
)
with doc.retokenize() as retokenizer:
for np in doc.noun_chunks:
retokenizer.merge(np, attrs={"lemma": np.lemma_})
assert doc[0].text == "A phrase"
assert doc[1].text == "with"
assert doc[2].text == "another phrase"
assert doc[3].text == "occurs"
@pytest.mark.skip(reason="The step_through API was removed (but should be brought back)")
def test_parser_arc_eager_finalize_state(en_tokenizer, en_parser):
text = "a b c d e"
# right branching
transition = ["R-nsubj", "D", "R-nsubj", "R-nsubj", "D", "R-ROOT"]
tokens = en_tokenizer(text)
apply_transition_sequence(en_parser, tokens, transition)
assert tokens[0].n_lefts == 0
assert tokens[0].n_rights == 2
assert tokens[0].left_edge.i == 0
assert tokens[0].right_edge.i == 4
assert tokens[0].head.i == 0
assert tokens[1].n_lefts == 0
assert tokens[1].n_rights == 0
assert tokens[1].left_edge.i == 1
assert tokens[1].right_edge.i == 1
assert tokens[1].head.i == 0
assert tokens[2].n_lefts == 0
assert tokens[2].n_rights == 2
assert tokens[2].left_edge.i == 2
assert tokens[2].right_edge.i == 4
assert tokens[2].head.i == 0
assert tokens[3].n_lefts == 0
assert tokens[3].n_rights == 0
assert tokens[3].left_edge.i == 3
assert tokens[3].right_edge.i == 3
assert tokens[3].head.i == 2
assert tokens[4].n_lefts == 0
assert tokens[4].n_rights == 0
assert tokens[4].left_edge.i == 4
assert tokens[4].right_edge.i == 4
assert tokens[4].head.i == 2
# left branching
transition = ["S", "S", "S", "L-nsubj", "L-nsubj", "L-nsubj", "L-nsubj"]
tokens = en_tokenizer(text)
apply_transition_sequence(en_parser, tokens, transition)
assert tokens[0].n_lefts == 0
assert tokens[0].n_rights == 0
assert tokens[0].left_edge.i == 0
assert tokens[0].right_edge.i == 0
assert tokens[0].head.i == 4
assert tokens[1].n_lefts == 0
assert tokens[1].n_rights == 0
assert tokens[1].left_edge.i == 1
assert tokens[1].right_edge.i == 1
assert tokens[1].head.i == 4
assert tokens[2].n_lefts == 0
assert tokens[2].n_rights == 0
assert tokens[2].left_edge.i == 2
assert tokens[2].right_edge.i == 2
assert tokens[2].head.i == 4
assert tokens[3].n_lefts == 0
assert tokens[3].n_rights == 0
assert tokens[3].left_edge.i == 3
assert tokens[3].right_edge.i == 3
assert tokens[3].head.i == 4
assert tokens[4].n_lefts == 4
assert tokens[4].n_rights == 0
assert tokens[4].left_edge.i == 0
assert tokens[4].right_edge.i == 4
assert tokens[4].head.i == 4
def test_parser_set_sent_starts(en_vocab):
# fmt: off
words = ['Ein', 'Satz', '.', 'Außerdem', 'ist', 'Zimmer', 'davon', 'überzeugt', ',', 'dass', 'auch', 'epige-', '\n', 'netische', 'Mechanismen', 'eine', 'Rolle', 'spielen', ',', 'also', 'Vorgänge', ',', 'die', '\n', 'sich', 'darauf', 'auswirken', ',', 'welche', 'Gene', 'abgelesen', 'werden', 'und', '\n', 'welche', 'nicht', '.', '\n']
heads = [1, 0, -1, 27, 0, -1, 1, -3, -1, 8, 4, 3, -1, 1, 3, 1, 1, -11, -1, 1, -9, -1, 4, -1, 2, 1, -6, -1, 1, 2, 1, -6, -1, -1, -17, -31, -32, -1]
deps = ['nk', 'ROOT', 'punct', 'mo', 'ROOT', 'sb', 'op', 'pd', 'punct', 'cp', 'mo', 'nk', '', 'nk', 'sb', 'nk', 'oa', 're', 'punct', 'mo', 'app', 'punct', 'sb', '', 'oa', 'op', 'rc', 'punct', 'nk', 'sb', 'oc', 're', 'cd', '', 'oa', 'ng', 'punct', '']
# fmt: on
doc = get_doc(en_vocab, words=words, deps=deps, heads=heads)
for i in range(len(words)):
if i == 0 or i == 3:
assert doc[i].is_sent_start is True
else:
assert doc[i].is_sent_start is None
for sent in doc.sents:
for token in sent:
assert token.head in sent
def test_overfitting_IO():
# Simple test to try and quickly overfit the dependency parser - ensuring the ML models work correctly
nlp = English()
parser = nlp.add_pipe("parser")
train_examples = []
for text, annotations in TRAIN_DATA:
train_examples.append(Example.from_dict(nlp.make_doc(text), annotations))
for dep in annotations.get("deps", []):
parser.add_label(dep)
optimizer = nlp.begin_training()
for i in range(100):
losses = {}
nlp.update(train_examples, sgd=optimizer, losses=losses)
assert losses["parser"] < 0.0001
# test the trained model
test_text = "I like securities."
doc = nlp(test_text)
assert doc[0].dep_ is "nsubj"
assert doc[2].dep_ is "dobj"
assert doc[3].dep_ is "punct"
# Also test the results are still the same after IO
with make_tempdir() as tmp_dir:
nlp.to_disk(tmp_dir)
nlp2 = util.load_model_from_path(tmp_dir)
doc2 = nlp2(test_text)
assert doc2[0].dep_ is "nsubj"
assert doc2[2].dep_ is "dobj"
assert doc2[3].dep_ is "punct"