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	* Make vocab update in get_docs deterministic
The attribute `DocBin.strings` is a set. In `DocBin.get_docs`
a given vocab is updated by iterating over this set.
Iteration over a python set produces an arbitrary ordering,
therefore vocab is updated non-deterministically.
When training (fine-tuning) a spacy model, the base model's
vocabulary will be updated with the new vocabulary in the
training data in exactly the way described above. After
serialization, the file `model/vocab/strings.json` will
be sorted in an arbitrary way. This prevents reproducible
model training.
* Revert "Make vocab update in get_docs deterministic"
This reverts commit d6b87a2f55.
* Sort strings in StringStore serialization
Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
		
	
			
		
			
				
	
	
		
			289 lines
		
	
	
		
			9.1 KiB
		
	
	
	
		
			Cython
		
	
	
	
	
	
			
		
		
	
	
			289 lines
		
	
	
		
			9.1 KiB
		
	
	
	
		
			Cython
		
	
	
	
	
	
| # cython: infer_types=True
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| cimport cython
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| from libc.string cimport memcpy
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| from libcpp.set cimport set
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| from libc.stdint cimport uint32_t
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| from murmurhash.mrmr cimport hash64, hash32
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| 
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| import srsly
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| 
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| from .typedefs cimport hash_t
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| 
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| from .symbols import IDS as SYMBOLS_BY_STR
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| from .symbols import NAMES as SYMBOLS_BY_INT
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| from .errors import Errors
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| from . import util
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| 
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| 
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| def get_string_id(key):
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|     """Get a string ID, handling the reserved symbols correctly. If the key is
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|     already an ID, return it.
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| 
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|     This function optimises for convenience over performance, so shouldn't be
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|     used in tight loops.
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|     """
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|     if not isinstance(key, str):
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|         return key
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|     elif key in SYMBOLS_BY_STR:
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|         return SYMBOLS_BY_STR[key]
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|     elif not key:
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|         return 0
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|     else:
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|         chars = key.encode("utf8")
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|         return hash_utf8(chars, len(chars))
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| 
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| 
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| cpdef hash_t hash_string(unicode string) except 0:
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|     chars = string.encode("utf8")
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|     return hash_utf8(chars, len(chars))
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| 
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| 
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| cdef hash_t hash_utf8(char* utf8_string, int length) nogil:
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|     return hash64(utf8_string, length, 1)
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| 
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| 
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| cdef uint32_t hash32_utf8(char* utf8_string, int length) nogil:
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|     return hash32(utf8_string, length, 1)
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| 
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| 
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| cdef unicode decode_Utf8Str(const Utf8Str* string):
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|     cdef int i, length
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|     if string.s[0] < sizeof(string.s) and string.s[0] != 0:
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|         return string.s[1:string.s[0]+1].decode("utf8")
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|     elif string.p[0] < 255:
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|         return string.p[1:string.p[0]+1].decode("utf8")
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|     else:
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|         i = 0
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|         length = 0
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|         while string.p[i] == 255:
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|             i += 1
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|             length += 255
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|         length += string.p[i]
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|         i += 1
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|         return string.p[i:length + i].decode("utf8")
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| 
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| 
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| cdef Utf8Str* _allocate(Pool mem, const unsigned char* chars, uint32_t length) except *:
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|     cdef int n_length_bytes
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|     cdef int i
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|     cdef Utf8Str* string = <Utf8Str*>mem.alloc(1, sizeof(Utf8Str))
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|     cdef uint32_t ulength = length
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|     if length < sizeof(string.s):
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|         string.s[0] = <unsigned char>length
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|         memcpy(&string.s[1], chars, length)
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|         return string
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|     elif length < 255:
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|         string.p = <unsigned char*>mem.alloc(length + 1, sizeof(unsigned char))
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|         string.p[0] = length
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|         memcpy(&string.p[1], chars, length)
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|         return string
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|     else:
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|         i = 0
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|         n_length_bytes = (length // 255) + 1
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|         string.p = <unsigned char*>mem.alloc(length + n_length_bytes, sizeof(unsigned char))
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|         for i in range(n_length_bytes-1):
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|             string.p[i] = 255
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|         string.p[n_length_bytes-1] = length % 255
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|         memcpy(&string.p[n_length_bytes], chars, length)
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|         return string
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| 
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| 
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| cdef class StringStore:
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|     """Look up strings by 64-bit hashes.
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| 
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|     DOCS: https://spacy.io/api/stringstore
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|     """
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|     def __init__(self, strings=None, freeze=False):
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|         """Create the StringStore.
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| 
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|         strings (iterable): A sequence of unicode strings to add to the store.
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|         """
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|         self.mem = Pool()
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|         self._map = PreshMap()
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|         if strings is not None:
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|             for string in strings:
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|                 self.add(string)
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| 
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|     def __getitem__(self, object string_or_id):
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|         """Retrieve a string from a given hash, or vice versa.
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| 
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|         string_or_id (bytes, unicode or uint64): The value to encode.
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|         Returns (str / uint64): The value to be retrieved.
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|         """
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|         if isinstance(string_or_id, basestring) and len(string_or_id) == 0:
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|             return 0
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|         elif string_or_id == 0:
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|             return ""
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|         elif string_or_id in SYMBOLS_BY_STR:
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|             return SYMBOLS_BY_STR[string_or_id]
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|         cdef hash_t key
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|         if isinstance(string_or_id, unicode):
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|             key = hash_string(string_or_id)
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|             return key
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|         elif isinstance(string_or_id, bytes):
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|             key = hash_utf8(string_or_id, len(string_or_id))
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|             return key
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|         elif string_or_id < len(SYMBOLS_BY_INT):
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|             return SYMBOLS_BY_INT[string_or_id]
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|         else:
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|             key = string_or_id
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|             utf8str = <Utf8Str*>self._map.get(key)
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|             if utf8str is NULL:
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|                 raise KeyError(Errors.E018.format(hash_value=string_or_id))
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|             else:
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|                 return decode_Utf8Str(utf8str)
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| 
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|     def as_int(self, key):
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|         """If key is an int, return it; otherwise, get the int value."""
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|         if not isinstance(key, basestring):
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|             return key
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|         else:
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|             return self[key]
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| 
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|     def as_string(self, key):
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|         """If key is a string, return it; otherwise, get the string value."""
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|         if isinstance(key, basestring):
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|             return key
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|         else:
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|             return self[key]
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| 
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|     def add(self, string):
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|         """Add a string to the StringStore.
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| 
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|         string (str): The string to add.
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|         RETURNS (uint64): The string's hash value.
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|         """
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|         if isinstance(string, unicode):
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|             if string in SYMBOLS_BY_STR:
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|                 return SYMBOLS_BY_STR[string]
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|             key = hash_string(string)
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|             self.intern_unicode(string)
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|         elif isinstance(string, bytes):
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|             if string in SYMBOLS_BY_STR:
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|                 return SYMBOLS_BY_STR[string]
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|             key = hash_utf8(string, len(string))
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|             self._intern_utf8(string, len(string))
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|         else:
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|             raise TypeError(Errors.E017.format(value_type=type(string)))
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|         return key
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| 
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|     def __len__(self):
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|         """The number of strings in the store.
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| 
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|         RETURNS (int): The number of strings in the store.
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|         """
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|         return self.keys.size()
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| 
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|     def __contains__(self, string not None):
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|         """Check whether a string is in the store.
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| 
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|         string (str): The string to check.
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|         RETURNS (bool): Whether the store contains the string.
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|         """
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|         cdef hash_t key
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|         if isinstance(string, int) or isinstance(string, long):
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|             if string == 0:
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|                 return True
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|             key = string
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|         elif len(string) == 0:
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|             return True
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|         elif string in SYMBOLS_BY_STR:
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|             return True
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|         elif isinstance(string, unicode):
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|             key = hash_string(string)
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|         else:
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|             string = string.encode("utf8")
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|             key = hash_utf8(string, len(string))
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|         if key < len(SYMBOLS_BY_INT):
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|             return True
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|         else:
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|             return self._map.get(key) is not NULL
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| 
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|     def __iter__(self):
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|         """Iterate over the strings in the store, in order.
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| 
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|         YIELDS (str): A string in the store.
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|         """
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|         cdef int i
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|         cdef hash_t key
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|         for i in range(self.keys.size()):
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|             key = self.keys[i]
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|             utf8str = <Utf8Str*>self._map.get(key)
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|             yield decode_Utf8Str(utf8str)
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|         # TODO: Iterate OOV here?
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| 
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|     def __reduce__(self):
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|         strings = list(self)
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|         return (StringStore, (strings,), None, None, None)
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| 
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|     def to_disk(self, path):
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|         """Save the current state to a directory.
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| 
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|         path (str / Path): A path to a directory, which will be created if
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|             it doesn't exist. Paths may be either strings or Path-like objects.
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|         """
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|         path = util.ensure_path(path)
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|         strings = sorted(self)
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|         srsly.write_json(path, strings)
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| 
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|     def from_disk(self, path):
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|         """Loads state from a directory. Modifies the object in place and
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|         returns it.
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| 
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|         path (str / Path): A path to a directory. Paths may be either
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|             strings or `Path`-like objects.
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|         RETURNS (StringStore): The modified `StringStore` object.
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|         """
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|         path = util.ensure_path(path)
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|         strings = srsly.read_json(path)
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|         prev = list(self)
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|         self._reset_and_load(strings)
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|         for word in prev:
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|             self.add(word)
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|         return self
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| 
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|     def to_bytes(self, **kwargs):
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|         """Serialize the current state to a binary string.
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| 
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|         RETURNS (bytes): The serialized form of the `StringStore` object.
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|         """
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|         return srsly.json_dumps(sorted(self))
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| 
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|     def from_bytes(self, bytes_data, **kwargs):
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|         """Load state from a binary string.
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| 
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|         bytes_data (bytes): The data to load from.
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|         RETURNS (StringStore): The `StringStore` object.
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|         """
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|         strings = srsly.json_loads(bytes_data)
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|         prev = list(self)
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|         self._reset_and_load(strings)
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|         for word in prev:
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|             self.add(word)
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|         return self
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| 
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|     def _reset_and_load(self, strings):
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|         self.mem = Pool()
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|         self._map = PreshMap()
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|         self.keys.clear()
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|         for string in strings:
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|             self.add(string)
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| 
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|     cdef const Utf8Str* intern_unicode(self, unicode py_string):
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|         # 0 means missing, but we don't bother offsetting the index.
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|         cdef bytes byte_string = py_string.encode("utf8")
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|         return self._intern_utf8(byte_string, len(byte_string))
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| 
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|     @cython.final
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|     cdef const Utf8Str* _intern_utf8(self, char* utf8_string, int length):
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|         # TODO: This function's API/behaviour is an unholy mess...
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|         # 0 means missing, but we don't bother offsetting the index.
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|         cdef hash_t key = hash_utf8(utf8_string, length)
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|         cdef Utf8Str* value = <Utf8Str*>self._map.get(key)
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|         if value is not NULL:
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|             return value
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|         value = _allocate(self.mem, <unsigned char*>utf8_string, length)
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|         self._map.set(key, value)
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|         self.keys.push_back(key)
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|         return value
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