mirror of
https://github.com/explosion/spaCy.git
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afe4a428f7
Validate *after* component is removed, not before
1151 lines
44 KiB
Python
1151 lines
44 KiB
Python
# coding: utf8
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from __future__ import absolute_import, unicode_literals
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import random
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import itertools
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from spacy.util import minibatch
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import weakref
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import functools
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from collections import OrderedDict
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from contextlib import contextmanager
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from copy import copy, deepcopy
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from thinc.neural import Model
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import srsly
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import multiprocessing as mp
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from itertools import chain, cycle
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from .tokenizer import Tokenizer
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from .vocab import Vocab
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from .lemmatizer import Lemmatizer
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from .lookups import Lookups
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from .analysis import analyze_pipes, analyze_all_pipes, validate_attrs
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from .compat import izip, basestring_, is_python2, class_types
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from .gold import GoldParse
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from .scorer import Scorer
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from ._ml import link_vectors_to_models, create_default_optimizer
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from .attrs import IS_STOP, LANG
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from .lang.punctuation import TOKENIZER_PREFIXES, TOKENIZER_SUFFIXES
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from .lang.punctuation import TOKENIZER_INFIXES
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from .lang.tokenizer_exceptions import TOKEN_MATCH
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from .lang.tag_map import TAG_MAP
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from .tokens import Doc
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from .lang.lex_attrs import LEX_ATTRS, is_stop
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from .errors import Errors, Warnings, deprecation_warning, user_warning
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from . import util
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from . import about
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ENABLE_PIPELINE_ANALYSIS = False
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class BaseDefaults(object):
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@classmethod
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def create_lemmatizer(cls, nlp=None, lookups=None):
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if lookups is None:
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lookups = cls.create_lookups(nlp=nlp)
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return Lemmatizer(lookups=lookups)
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@classmethod
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def create_lookups(cls, nlp=None):
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root = util.get_module_path(cls)
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filenames = {name: root / filename for name, filename in cls.resources}
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if LANG in cls.lex_attr_getters:
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lang = cls.lex_attr_getters[LANG](None)
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user_lookups = util.get_entry_point(util.ENTRY_POINTS.lookups, lang, {})
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filenames.update(user_lookups)
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lookups = Lookups()
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for name, filename in filenames.items():
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data = util.load_language_data(filename)
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lookups.add_table(name, data)
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return lookups
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@classmethod
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def create_vocab(cls, nlp=None):
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lookups = cls.create_lookups(nlp)
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lemmatizer = cls.create_lemmatizer(nlp, lookups=lookups)
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lex_attr_getters = dict(cls.lex_attr_getters)
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# This is messy, but it's the minimal working fix to Issue #639.
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lex_attr_getters[IS_STOP] = functools.partial(is_stop, stops=cls.stop_words)
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vocab = Vocab(
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lex_attr_getters=lex_attr_getters,
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tag_map=cls.tag_map,
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lemmatizer=lemmatizer,
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lookups=lookups,
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)
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for tag_str, exc in cls.morph_rules.items():
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for orth_str, attrs in exc.items():
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vocab.morphology.add_special_case(tag_str, orth_str, attrs)
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return vocab
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@classmethod
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def create_tokenizer(cls, nlp=None):
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rules = cls.tokenizer_exceptions
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token_match = cls.token_match
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prefix_search = (
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util.compile_prefix_regex(cls.prefixes).search if cls.prefixes else None
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)
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suffix_search = (
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util.compile_suffix_regex(cls.suffixes).search if cls.suffixes else None
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)
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infix_finditer = (
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util.compile_infix_regex(cls.infixes).finditer if cls.infixes else None
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)
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vocab = nlp.vocab if nlp is not None else cls.create_vocab(nlp)
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return Tokenizer(
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vocab,
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rules=rules,
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prefix_search=prefix_search,
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suffix_search=suffix_search,
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infix_finditer=infix_finditer,
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token_match=token_match,
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)
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pipe_names = ["tagger", "parser", "ner"]
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token_match = TOKEN_MATCH
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prefixes = tuple(TOKENIZER_PREFIXES)
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suffixes = tuple(TOKENIZER_SUFFIXES)
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infixes = tuple(TOKENIZER_INFIXES)
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tag_map = dict(TAG_MAP)
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tokenizer_exceptions = {}
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stop_words = set()
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morph_rules = {}
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lex_attr_getters = LEX_ATTRS
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syntax_iterators = {}
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resources = {}
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writing_system = {"direction": "ltr", "has_case": True, "has_letters": True}
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single_orth_variants = []
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paired_orth_variants = []
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class Language(object):
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"""A text-processing pipeline. Usually you'll load this once per process,
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and pass the instance around your application.
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Defaults (class): Settings, data and factory methods for creating the `nlp`
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object and processing pipeline.
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lang (unicode): Two-letter language ID, i.e. ISO code.
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DOCS: https://spacy.io/api/language
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"""
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Defaults = BaseDefaults
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lang = None
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factories = {"tokenizer": lambda nlp: nlp.Defaults.create_tokenizer(nlp)}
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def __init__(
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self, vocab=True, make_doc=True, max_length=10 ** 6, meta={}, **kwargs
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):
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"""Initialise a Language object.
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vocab (Vocab): A `Vocab` object. If `True`, a vocab is created via
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`Language.Defaults.create_vocab`.
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make_doc (callable): A function that takes text and returns a `Doc`
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object. Usually a `Tokenizer`.
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meta (dict): Custom meta data for the Language class. Is written to by
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models to add model meta data.
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max_length (int) :
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Maximum number of characters in a single text. The current v2 models
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may run out memory on extremely long texts, due to large internal
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allocations. You should segment these texts into meaningful units,
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e.g. paragraphs, subsections etc, before passing them to spaCy.
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Default maximum length is 1,000,000 characters (1mb). As a rule of
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thumb, if all pipeline components are enabled, spaCy's default
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models currently requires roughly 1GB of temporary memory per
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100,000 characters in one text.
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RETURNS (Language): The newly constructed object.
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"""
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user_factories = util.get_entry_points(util.ENTRY_POINTS.factories)
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self.factories.update(user_factories)
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self._meta = dict(meta)
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self._path = None
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if vocab is True:
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factory = self.Defaults.create_vocab
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vocab = factory(self, **meta.get("vocab", {}))
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if vocab.vectors.name is None:
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vocab.vectors.name = meta.get("vectors", {}).get("name")
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else:
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if (self.lang and vocab.lang) and (self.lang != vocab.lang):
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raise ValueError(Errors.E150.format(nlp=self.lang, vocab=vocab.lang))
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self.vocab = vocab
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if make_doc is True:
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factory = self.Defaults.create_tokenizer
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make_doc = factory(self, **meta.get("tokenizer", {}))
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self.tokenizer = make_doc
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self.pipeline = []
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self.max_length = max_length
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self._optimizer = None
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@property
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def path(self):
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return self._path
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@property
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def meta(self):
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if self.vocab.lang:
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self._meta.setdefault("lang", self.vocab.lang)
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else:
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self._meta.setdefault("lang", self.lang)
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self._meta.setdefault("name", "model")
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self._meta.setdefault("version", "0.0.0")
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self._meta.setdefault("spacy_version", ">={}".format(about.__version__))
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self._meta.setdefault("description", "")
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self._meta.setdefault("author", "")
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self._meta.setdefault("email", "")
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self._meta.setdefault("url", "")
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self._meta.setdefault("license", "")
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self._meta["vectors"] = {
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"width": self.vocab.vectors_length,
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"vectors": len(self.vocab.vectors),
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"keys": self.vocab.vectors.n_keys,
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"name": self.vocab.vectors.name,
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}
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self._meta["pipeline"] = self.pipe_names
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self._meta["factories"] = self.pipe_factories
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self._meta["labels"] = self.pipe_labels
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return self._meta
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@meta.setter
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def meta(self, value):
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self._meta = value
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# Conveniences to access pipeline components
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# Shouldn't be used anymore!
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@property
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def tensorizer(self):
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return self.get_pipe("tensorizer")
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@property
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def tagger(self):
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return self.get_pipe("tagger")
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@property
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def parser(self):
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return self.get_pipe("parser")
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@property
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def entity(self):
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return self.get_pipe("ner")
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@property
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def linker(self):
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return self.get_pipe("entity_linker")
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@property
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def matcher(self):
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return self.get_pipe("matcher")
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@property
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def pipe_names(self):
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"""Get names of available pipeline components.
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RETURNS (list): List of component name strings, in order.
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"""
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return [pipe_name for pipe_name, _ in self.pipeline]
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@property
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def pipe_factories(self):
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"""Get the component factories for the available pipeline components.
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RETURNS (dict): Factory names, keyed by component names.
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"""
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factories = {}
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for pipe_name, pipe in self.pipeline:
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factories[pipe_name] = getattr(pipe, "factory", pipe_name)
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return factories
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@property
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def pipe_labels(self):
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"""Get the labels set by the pipeline components, if available (if
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the component exposes a labels property).
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RETURNS (dict): Labels keyed by component name.
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"""
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labels = OrderedDict()
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for name, pipe in self.pipeline:
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if hasattr(pipe, "labels"):
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labels[name] = list(pipe.labels)
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return labels
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def get_pipe(self, name):
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"""Get a pipeline component for a given component name.
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name (unicode): Name of pipeline component to get.
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RETURNS (callable): The pipeline component.
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DOCS: https://spacy.io/api/language#get_pipe
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"""
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for pipe_name, component in self.pipeline:
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if pipe_name == name:
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return component
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raise KeyError(Errors.E001.format(name=name, opts=self.pipe_names))
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def create_pipe(self, name, config=dict()):
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"""Create a pipeline component from a factory.
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name (unicode): Factory name to look up in `Language.factories`.
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config (dict): Configuration parameters to initialise component.
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RETURNS (callable): Pipeline component.
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DOCS: https://spacy.io/api/language#create_pipe
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"""
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if name not in self.factories:
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if name == "sbd":
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raise KeyError(Errors.E108.format(name=name))
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else:
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raise KeyError(Errors.E002.format(name=name))
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factory = self.factories[name]
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return factory(self, **config)
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def add_pipe(
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self, component, name=None, before=None, after=None, first=None, last=None
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):
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"""Add a component to the processing pipeline. Valid components are
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callables that take a `Doc` object, modify it and return it. Only one
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of before/after/first/last can be set. Default behaviour is "last".
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component (callable): The pipeline component.
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name (unicode): Name of pipeline component. Overwrites existing
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component.name attribute if available. If no name is set and
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the component exposes no name attribute, component.__name__ is
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used. An error is raised if a name already exists in the pipeline.
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before (unicode): Component name to insert component directly before.
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after (unicode): Component name to insert component directly after.
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first (bool): Insert component first / not first in the pipeline.
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last (bool): Insert component last / not last in the pipeline.
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DOCS: https://spacy.io/api/language#add_pipe
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"""
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if not hasattr(component, "__call__"):
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msg = Errors.E003.format(component=repr(component), name=name)
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if isinstance(component, basestring_) and component in self.factories:
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msg += Errors.E004.format(component=component)
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raise ValueError(msg)
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if name is None:
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name = util.get_component_name(component)
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if name in self.pipe_names:
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raise ValueError(Errors.E007.format(name=name, opts=self.pipe_names))
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if sum([bool(before), bool(after), bool(first), bool(last)]) >= 2:
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raise ValueError(Errors.E006)
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pipe_index = 0
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pipe = (name, component)
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if last or not any([first, before, after]):
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pipe_index = len(self.pipeline)
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self.pipeline.append(pipe)
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elif first:
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self.pipeline.insert(0, pipe)
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elif before and before in self.pipe_names:
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pipe_index = self.pipe_names.index(before)
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self.pipeline.insert(self.pipe_names.index(before), pipe)
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elif after and after in self.pipe_names:
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pipe_index = self.pipe_names.index(after) + 1
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self.pipeline.insert(self.pipe_names.index(after) + 1, pipe)
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else:
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raise ValueError(
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Errors.E001.format(name=before or after, opts=self.pipe_names)
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)
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if ENABLE_PIPELINE_ANALYSIS:
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analyze_pipes(self.pipeline, name, component, pipe_index)
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def has_pipe(self, name):
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"""Check if a component name is present in the pipeline. Equivalent to
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`name in nlp.pipe_names`.
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name (unicode): Name of the component.
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RETURNS (bool): Whether a component of the name exists in the pipeline.
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DOCS: https://spacy.io/api/language#has_pipe
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"""
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return name in self.pipe_names
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def replace_pipe(self, name, component):
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"""Replace a component in the pipeline.
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name (unicode): Name of the component to replace.
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component (callable): Pipeline component.
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DOCS: https://spacy.io/api/language#replace_pipe
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"""
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if name not in self.pipe_names:
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raise ValueError(Errors.E001.format(name=name, opts=self.pipe_names))
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if not hasattr(component, "__call__"):
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msg = Errors.E003.format(component=repr(component), name=name)
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if isinstance(component, basestring_) and component in self.factories:
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msg += Errors.E135.format(name=name)
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raise ValueError(msg)
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self.pipeline[self.pipe_names.index(name)] = (name, component)
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if ENABLE_PIPELINE_ANALYSIS:
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analyze_all_pipes(self.pipeline)
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def rename_pipe(self, old_name, new_name):
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"""Rename a pipeline component.
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old_name (unicode): Name of the component to rename.
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new_name (unicode): New name of the component.
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DOCS: https://spacy.io/api/language#rename_pipe
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"""
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if old_name not in self.pipe_names:
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raise ValueError(Errors.E001.format(name=old_name, opts=self.pipe_names))
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if new_name in self.pipe_names:
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raise ValueError(Errors.E007.format(name=new_name, opts=self.pipe_names))
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i = self.pipe_names.index(old_name)
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self.pipeline[i] = (new_name, self.pipeline[i][1])
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def remove_pipe(self, name):
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"""Remove a component from the pipeline.
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name (unicode): Name of the component to remove.
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RETURNS (tuple): A `(name, component)` tuple of the removed component.
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DOCS: https://spacy.io/api/language#remove_pipe
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"""
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if name not in self.pipe_names:
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raise ValueError(Errors.E001.format(name=name, opts=self.pipe_names))
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removed = self.pipeline.pop(self.pipe_names.index(name))
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if ENABLE_PIPELINE_ANALYSIS:
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analyze_all_pipes(self.pipeline)
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return removed
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def __call__(self, text, disable=[], component_cfg=None):
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"""Apply the pipeline to some text. The text can span multiple sentences,
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and can contain arbtrary whitespace. Alignment into the original string
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is preserved.
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text (unicode): The text to be processed.
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disable (list): Names of the pipeline components to disable.
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component_cfg (dict): An optional dictionary with extra keyword arguments
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for specific components.
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RETURNS (Doc): A container for accessing the annotations.
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DOCS: https://spacy.io/api/language#call
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"""
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if len(text) > self.max_length:
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raise ValueError(
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Errors.E088.format(length=len(text), max_length=self.max_length)
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)
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doc = self.make_doc(text)
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if component_cfg is None:
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component_cfg = {}
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for name, proc in self.pipeline:
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if name in disable:
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continue
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if not hasattr(proc, "__call__"):
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raise ValueError(Errors.E003.format(component=type(proc), name=name))
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doc = proc(doc, **component_cfg.get(name, {}))
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if doc is None:
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raise ValueError(Errors.E005.format(name=name))
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return doc
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def disable_pipes(self, *names):
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"""Disable one or more pipeline components. If used as a context
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manager, the pipeline will be restored to the initial state at the end
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of the block. Otherwise, a DisabledPipes object is returned, that has
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a `.restore()` method you can use to undo your changes.
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DOCS: https://spacy.io/api/language#disable_pipes
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"""
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if len(names) == 1 and isinstance(names[0], (list, tuple)):
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names = names[0] # support list of names instead of spread
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return DisabledPipes(self, *names)
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def make_doc(self, text):
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return self.tokenizer(text)
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def _format_docs_and_golds(self, docs, golds):
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"""Format golds and docs before update models."""
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expected_keys = ("words", "tags", "heads", "deps", "entities", "cats", "links")
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gold_objs = []
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doc_objs = []
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for doc, gold in zip(docs, golds):
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if isinstance(doc, basestring_):
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doc = self.make_doc(doc)
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if not isinstance(gold, GoldParse):
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unexpected = [k for k in gold if k not in expected_keys]
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if unexpected:
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err = Errors.E151.format(unexp=unexpected, exp=expected_keys)
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raise ValueError(err)
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gold = GoldParse(doc, **gold)
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doc_objs.append(doc)
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gold_objs.append(gold)
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return doc_objs, gold_objs
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def update(self, docs, golds, drop=0.0, sgd=None, losses=None, component_cfg=None):
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|
"""Update the models in the pipeline.
|
|
|
|
docs (iterable): A batch of `Doc` objects.
|
|
golds (iterable): A batch of `GoldParse` objects.
|
|
drop (float): The dropout rate.
|
|
sgd (callable): An optimizer.
|
|
losses (dict): Dictionary to update with the loss, keyed by component.
|
|
component_cfg (dict): Config parameters for specific pipeline
|
|
components, keyed by component name.
|
|
|
|
DOCS: https://spacy.io/api/language#update
|
|
"""
|
|
if len(docs) != len(golds):
|
|
raise IndexError(Errors.E009.format(n_docs=len(docs), n_golds=len(golds)))
|
|
if len(docs) == 0:
|
|
return
|
|
if sgd is None:
|
|
if self._optimizer is None:
|
|
self._optimizer = create_default_optimizer(Model.ops)
|
|
sgd = self._optimizer
|
|
# Allow dict of args to GoldParse, instead of GoldParse objects.
|
|
docs, golds = self._format_docs_and_golds(docs, golds)
|
|
grads = {}
|
|
|
|
def get_grads(W, dW, key=None):
|
|
grads[key] = (W, dW)
|
|
|
|
get_grads.alpha = sgd.alpha
|
|
get_grads.b1 = sgd.b1
|
|
get_grads.b2 = sgd.b2
|
|
pipes = list(self.pipeline)
|
|
random.shuffle(pipes)
|
|
if component_cfg is None:
|
|
component_cfg = {}
|
|
for name, proc in pipes:
|
|
if not hasattr(proc, "update"):
|
|
continue
|
|
grads = {}
|
|
kwargs = component_cfg.get(name, {})
|
|
kwargs.setdefault("drop", drop)
|
|
proc.update(docs, golds, sgd=get_grads, losses=losses, **kwargs)
|
|
for key, (W, dW) in grads.items():
|
|
sgd(W, dW, key=key)
|
|
|
|
def rehearse(self, docs, sgd=None, losses=None, config=None):
|
|
"""Make a "rehearsal" update to the models in the pipeline, to prevent
|
|
forgetting. Rehearsal updates run an initial copy of the model over some
|
|
data, and update the model so its current predictions are more like the
|
|
initial ones. This is useful for keeping a pretrained model on-track,
|
|
even if you're updating it with a smaller set of examples.
|
|
|
|
docs (iterable): A batch of `Doc` objects.
|
|
drop (float): The dropout rate.
|
|
sgd (callable): An optimizer.
|
|
RETURNS (dict): Results from the update.
|
|
|
|
EXAMPLE:
|
|
>>> raw_text_batches = minibatch(raw_texts)
|
|
>>> for labelled_batch in minibatch(zip(train_docs, train_golds)):
|
|
>>> docs, golds = zip(*train_docs)
|
|
>>> nlp.update(docs, golds)
|
|
>>> raw_batch = [nlp.make_doc(text) for text in next(raw_text_batches)]
|
|
>>> nlp.rehearse(raw_batch)
|
|
"""
|
|
# TODO: document
|
|
if len(docs) == 0:
|
|
return
|
|
if sgd is None:
|
|
if self._optimizer is None:
|
|
self._optimizer = create_default_optimizer(Model.ops)
|
|
sgd = self._optimizer
|
|
docs = list(docs)
|
|
for i, doc in enumerate(docs):
|
|
if isinstance(doc, basestring_):
|
|
docs[i] = self.make_doc(doc)
|
|
pipes = list(self.pipeline)
|
|
random.shuffle(pipes)
|
|
if config is None:
|
|
config = {}
|
|
grads = {}
|
|
|
|
def get_grads(W, dW, key=None):
|
|
grads[key] = (W, dW)
|
|
|
|
get_grads.alpha = sgd.alpha
|
|
get_grads.b1 = sgd.b1
|
|
get_grads.b2 = sgd.b2
|
|
for name, proc in pipes:
|
|
if not hasattr(proc, "rehearse"):
|
|
continue
|
|
grads = {}
|
|
proc.rehearse(docs, sgd=get_grads, losses=losses, **config.get(name, {}))
|
|
for key, (W, dW) in grads.items():
|
|
sgd(W, dW, key=key)
|
|
return losses
|
|
|
|
def preprocess_gold(self, docs_golds):
|
|
"""Can be called before training to pre-process gold data. By default,
|
|
it handles nonprojectivity and adds missing tags to the tag map.
|
|
|
|
docs_golds (iterable): Tuples of `Doc` and `GoldParse` objects.
|
|
YIELDS (tuple): Tuples of preprocessed `Doc` and `GoldParse` objects.
|
|
"""
|
|
for name, proc in self.pipeline:
|
|
if hasattr(proc, "preprocess_gold"):
|
|
docs_golds = proc.preprocess_gold(docs_golds)
|
|
for doc, gold in docs_golds:
|
|
yield doc, gold
|
|
|
|
def begin_training(self, get_gold_tuples=None, sgd=None, component_cfg=None, **cfg):
|
|
"""Allocate models, pre-process training data and acquire a trainer and
|
|
optimizer. Used as a contextmanager.
|
|
|
|
get_gold_tuples (function): Function returning gold data
|
|
component_cfg (dict): Config parameters for specific components.
|
|
**cfg: Config parameters.
|
|
RETURNS: An optimizer.
|
|
|
|
DOCS: https://spacy.io/api/language#begin_training
|
|
"""
|
|
if get_gold_tuples is None:
|
|
get_gold_tuples = lambda: []
|
|
# Populate vocab
|
|
else:
|
|
for _, annots_brackets in get_gold_tuples():
|
|
_ = annots_brackets.pop()
|
|
for annots, _ in annots_brackets:
|
|
for word in annots[1]:
|
|
_ = self.vocab[word] # noqa: F841
|
|
if cfg.get("device", -1) >= 0:
|
|
util.use_gpu(cfg["device"])
|
|
if self.vocab.vectors.data.shape[1] >= 1:
|
|
self.vocab.vectors.data = Model.ops.asarray(self.vocab.vectors.data)
|
|
link_vectors_to_models(self.vocab)
|
|
if self.vocab.vectors.data.shape[1]:
|
|
cfg["pretrained_vectors"] = self.vocab.vectors.name
|
|
if sgd is None:
|
|
sgd = create_default_optimizer(Model.ops)
|
|
self._optimizer = sgd
|
|
if component_cfg is None:
|
|
component_cfg = {}
|
|
for name, proc in self.pipeline:
|
|
if hasattr(proc, "begin_training"):
|
|
kwargs = component_cfg.get(name, {})
|
|
kwargs.update(cfg)
|
|
proc.begin_training(
|
|
get_gold_tuples,
|
|
pipeline=self.pipeline,
|
|
sgd=self._optimizer,
|
|
**kwargs
|
|
)
|
|
return self._optimizer
|
|
|
|
def resume_training(self, sgd=None, **cfg):
|
|
"""Continue training a pretrained model.
|
|
|
|
Create and return an optimizer, and initialize "rehearsal" for any pipeline
|
|
component that has a .rehearse() method. Rehearsal is used to prevent
|
|
models from "forgetting" their initialised "knowledge". To perform
|
|
rehearsal, collect samples of text you want the models to retain performance
|
|
on, and call nlp.rehearse() with a batch of Doc objects.
|
|
"""
|
|
if cfg.get("device", -1) >= 0:
|
|
util.use_gpu(cfg["device"])
|
|
if self.vocab.vectors.data.shape[1] >= 1:
|
|
self.vocab.vectors.data = Model.ops.asarray(self.vocab.vectors.data)
|
|
link_vectors_to_models(self.vocab)
|
|
if self.vocab.vectors.data.shape[1]:
|
|
cfg["pretrained_vectors"] = self.vocab.vectors.name
|
|
if sgd is None:
|
|
sgd = create_default_optimizer(Model.ops)
|
|
self._optimizer = sgd
|
|
for name, proc in self.pipeline:
|
|
if hasattr(proc, "_rehearsal_model"):
|
|
proc._rehearsal_model = deepcopy(proc.model)
|
|
return self._optimizer
|
|
|
|
def evaluate(
|
|
self, docs_golds, verbose=False, batch_size=256, scorer=None, component_cfg=None
|
|
):
|
|
"""Evaluate a model's pipeline components.
|
|
|
|
docs_golds (iterable): Tuples of `Doc` and `GoldParse` objects.
|
|
verbose (bool): Print debugging information.
|
|
batch_size (int): Batch size to use.
|
|
scorer (Scorer): Optional `Scorer` to use. If not passed in, a new one
|
|
will be created.
|
|
component_cfg (dict): An optional dictionary with extra keyword
|
|
arguments for specific components.
|
|
RETURNS (Scorer): The scorer containing the evaluation results.
|
|
|
|
DOCS: https://spacy.io/api/language#evaluate
|
|
"""
|
|
if scorer is None:
|
|
scorer = Scorer(pipeline=self.pipeline)
|
|
if component_cfg is None:
|
|
component_cfg = {}
|
|
docs, golds = zip(*docs_golds)
|
|
docs = [
|
|
self.make_doc(doc) if isinstance(doc, basestring_) else doc for doc in docs
|
|
]
|
|
golds = list(golds)
|
|
for name, pipe in self.pipeline:
|
|
kwargs = component_cfg.get(name, {})
|
|
kwargs.setdefault("batch_size", batch_size)
|
|
if not hasattr(pipe, "pipe"):
|
|
docs = _pipe(pipe, docs, kwargs)
|
|
else:
|
|
docs = pipe.pipe(docs, **kwargs)
|
|
for doc, gold in zip(docs, golds):
|
|
if not isinstance(gold, GoldParse):
|
|
gold = GoldParse(doc, **gold)
|
|
if verbose:
|
|
print(doc)
|
|
kwargs = component_cfg.get("scorer", {})
|
|
kwargs.setdefault("verbose", verbose)
|
|
scorer.score(doc, gold, **kwargs)
|
|
return scorer
|
|
|
|
@contextmanager
|
|
def use_params(self, params, **cfg):
|
|
"""Replace weights of models in the pipeline with those provided in the
|
|
params dictionary. Can be used as a contextmanager, in which case,
|
|
models go back to their original weights after the block.
|
|
|
|
params (dict): A dictionary of parameters keyed by model ID.
|
|
**cfg: Config parameters.
|
|
|
|
EXAMPLE:
|
|
>>> with nlp.use_params(optimizer.averages):
|
|
>>> nlp.to_disk('/tmp/checkpoint')
|
|
"""
|
|
contexts = [
|
|
pipe.use_params(params)
|
|
for name, pipe in self.pipeline
|
|
if hasattr(pipe, "use_params")
|
|
]
|
|
# TODO: Having trouble with contextlib
|
|
# Workaround: these aren't actually context managers atm.
|
|
for context in contexts:
|
|
try:
|
|
next(context)
|
|
except StopIteration:
|
|
pass
|
|
yield
|
|
for context in contexts:
|
|
try:
|
|
next(context)
|
|
except StopIteration:
|
|
pass
|
|
|
|
def pipe(
|
|
self,
|
|
texts,
|
|
as_tuples=False,
|
|
n_threads=-1,
|
|
batch_size=1000,
|
|
disable=[],
|
|
cleanup=False,
|
|
component_cfg=None,
|
|
n_process=1,
|
|
):
|
|
"""Process texts as a stream, and yield `Doc` objects in order.
|
|
|
|
texts (iterator): A sequence of texts to process.
|
|
as_tuples (bool): If set to True, inputs should be a sequence of
|
|
(text, context) tuples. Output will then be a sequence of
|
|
(doc, context) tuples. Defaults to False.
|
|
batch_size (int): The number of texts to buffer.
|
|
disable (list): Names of the pipeline components to disable.
|
|
cleanup (bool): If True, unneeded strings are freed to control memory
|
|
use. Experimental.
|
|
component_cfg (dict): An optional dictionary with extra keyword
|
|
arguments for specific components.
|
|
n_process (int): Number of processors to process texts, only supported
|
|
in Python3. If -1, set `multiprocessing.cpu_count()`.
|
|
YIELDS (Doc): Documents in the order of the original text.
|
|
|
|
DOCS: https://spacy.io/api/language#pipe
|
|
"""
|
|
# raw_texts will be used later to stop iterator.
|
|
texts, raw_texts = itertools.tee(texts)
|
|
if is_python2 and n_process != 1:
|
|
user_warning(Warnings.W023)
|
|
n_process = 1
|
|
if n_threads != -1:
|
|
deprecation_warning(Warnings.W016)
|
|
if n_process == -1:
|
|
n_process = mp.cpu_count()
|
|
if as_tuples:
|
|
text_context1, text_context2 = itertools.tee(texts)
|
|
texts = (tc[0] for tc in text_context1)
|
|
contexts = (tc[1] for tc in text_context2)
|
|
docs = self.pipe(
|
|
texts,
|
|
batch_size=batch_size,
|
|
disable=disable,
|
|
component_cfg=component_cfg,
|
|
)
|
|
for doc, context in izip(docs, contexts):
|
|
yield (doc, context)
|
|
return
|
|
if component_cfg is None:
|
|
component_cfg = {}
|
|
|
|
pipes = (
|
|
[]
|
|
) # contains functools.partial objects so that easily create multiprocess worker.
|
|
for name, proc in self.pipeline:
|
|
if name in disable:
|
|
continue
|
|
kwargs = component_cfg.get(name, {})
|
|
# Allow component_cfg to overwrite the top-level kwargs.
|
|
kwargs.setdefault("batch_size", batch_size)
|
|
if hasattr(proc, "pipe"):
|
|
f = functools.partial(proc.pipe, **kwargs)
|
|
else:
|
|
# Apply the function, but yield the doc
|
|
f = functools.partial(_pipe, proc=proc, kwargs=kwargs)
|
|
pipes.append(f)
|
|
|
|
if n_process != 1:
|
|
docs = self._multiprocessing_pipe(texts, pipes, n_process, batch_size)
|
|
else:
|
|
# if n_process == 1, no processes are forked.
|
|
docs = (self.make_doc(text) for text in texts)
|
|
for pipe in pipes:
|
|
docs = pipe(docs)
|
|
|
|
# Track weakrefs of "recent" documents, so that we can see when they
|
|
# expire from memory. When they do, we know we don't need old strings.
|
|
# This way, we avoid maintaining an unbounded growth in string entries
|
|
# in the string store.
|
|
recent_refs = weakref.WeakSet()
|
|
old_refs = weakref.WeakSet()
|
|
# Keep track of the original string data, so that if we flush old strings,
|
|
# we can recover the original ones. However, we only want to do this if we're
|
|
# really adding strings, to save up-front costs.
|
|
original_strings_data = None
|
|
nr_seen = 0
|
|
for doc in docs:
|
|
yield doc
|
|
if cleanup:
|
|
recent_refs.add(doc)
|
|
if nr_seen < 10000:
|
|
old_refs.add(doc)
|
|
nr_seen += 1
|
|
elif len(old_refs) == 0:
|
|
old_refs, recent_refs = recent_refs, old_refs
|
|
if original_strings_data is None:
|
|
original_strings_data = list(self.vocab.strings)
|
|
else:
|
|
keys, strings = self.vocab.strings._cleanup_stale_strings(
|
|
original_strings_data
|
|
)
|
|
self.vocab._reset_cache(keys, strings)
|
|
self.tokenizer._reset_cache(keys)
|
|
nr_seen = 0
|
|
|
|
def _multiprocessing_pipe(self, texts, pipes, n_process, batch_size):
|
|
# raw_texts is used later to stop iteration.
|
|
texts, raw_texts = itertools.tee(texts)
|
|
# for sending texts to worker
|
|
texts_q = [mp.Queue() for _ in range(n_process)]
|
|
# for receiving byte encoded docs from worker
|
|
bytedocs_recv_ch, bytedocs_send_ch = zip(
|
|
*[mp.Pipe(False) for _ in range(n_process)]
|
|
)
|
|
|
|
batch_texts = minibatch(texts, batch_size)
|
|
# Sender sends texts to the workers.
|
|
# This is necessary to properly handle infinite length of texts.
|
|
# (In this case, all data cannot be sent to the workers at once)
|
|
sender = _Sender(batch_texts, texts_q, chunk_size=n_process)
|
|
# send twice so that make process busy
|
|
sender.send()
|
|
sender.send()
|
|
|
|
procs = [
|
|
mp.Process(target=_apply_pipes, args=(self.make_doc, pipes, rch, sch))
|
|
for rch, sch in zip(texts_q, bytedocs_send_ch)
|
|
]
|
|
for proc in procs:
|
|
proc.start()
|
|
|
|
# Cycle channels not to break the order of docs.
|
|
# The received object is batch of byte encoded docs, so flatten them with chain.from_iterable.
|
|
byte_docs = chain.from_iterable(recv.recv() for recv in cycle(bytedocs_recv_ch))
|
|
docs = (Doc(self.vocab).from_bytes(byte_doc) for byte_doc in byte_docs)
|
|
try:
|
|
for i, (_, doc) in enumerate(zip(raw_texts, docs), 1):
|
|
yield doc
|
|
if i % batch_size == 0:
|
|
# tell `sender` that one batch was consumed.
|
|
sender.step()
|
|
finally:
|
|
for proc in procs:
|
|
proc.terminate()
|
|
|
|
def to_disk(self, path, exclude=tuple(), disable=None):
|
|
"""Save the current state to a directory. If a model is loaded, this
|
|
will include the model.
|
|
|
|
path (unicode or Path): Path to a directory, which will be created if
|
|
it doesn't exist.
|
|
exclude (list): Names of components or serialization fields to exclude.
|
|
|
|
DOCS: https://spacy.io/api/language#to_disk
|
|
"""
|
|
if disable is not None:
|
|
deprecation_warning(Warnings.W014)
|
|
exclude = disable
|
|
path = util.ensure_path(path)
|
|
serializers = OrderedDict()
|
|
serializers["tokenizer"] = lambda p: self.tokenizer.to_disk(
|
|
p, exclude=["vocab"]
|
|
)
|
|
serializers["meta.json"] = lambda p: p.open("w").write(
|
|
srsly.json_dumps(self.meta)
|
|
)
|
|
for name, proc in self.pipeline:
|
|
if not hasattr(proc, "name"):
|
|
continue
|
|
if name in exclude:
|
|
continue
|
|
if not hasattr(proc, "to_disk"):
|
|
continue
|
|
serializers[name] = lambda p, proc=proc: proc.to_disk(p, exclude=["vocab"])
|
|
serializers["vocab"] = lambda p: self.vocab.to_disk(p)
|
|
util.to_disk(path, serializers, exclude)
|
|
|
|
def from_disk(self, path, exclude=tuple(), disable=None):
|
|
"""Loads state from a directory. Modifies the object in place and
|
|
returns it. If the saved `Language` object contains a model, the
|
|
model will be loaded.
|
|
|
|
path (unicode or Path): A path to a directory.
|
|
exclude (list): Names of components or serialization fields to exclude.
|
|
RETURNS (Language): The modified `Language` object.
|
|
|
|
DOCS: https://spacy.io/api/language#from_disk
|
|
"""
|
|
if disable is not None:
|
|
deprecation_warning(Warnings.W014)
|
|
exclude = disable
|
|
path = util.ensure_path(path)
|
|
deserializers = OrderedDict()
|
|
deserializers["meta.json"] = lambda p: self.meta.update(srsly.read_json(p))
|
|
deserializers["vocab"] = lambda p: self.vocab.from_disk(
|
|
p
|
|
) and _fix_pretrained_vectors_name(self)
|
|
deserializers["tokenizer"] = lambda p: self.tokenizer.from_disk(
|
|
p, exclude=["vocab"]
|
|
)
|
|
for name, proc in self.pipeline:
|
|
if name in exclude:
|
|
continue
|
|
if not hasattr(proc, "from_disk"):
|
|
continue
|
|
deserializers[name] = lambda p, proc=proc: proc.from_disk(
|
|
p, exclude=["vocab"]
|
|
)
|
|
if not (path / "vocab").exists() and "vocab" not in exclude:
|
|
# Convert to list here in case exclude is (default) tuple
|
|
exclude = list(exclude) + ["vocab"]
|
|
util.from_disk(path, deserializers, exclude)
|
|
self._path = path
|
|
return self
|
|
|
|
def to_bytes(self, exclude=tuple(), disable=None, **kwargs):
|
|
"""Serialize the current state to a binary string.
|
|
|
|
exclude (list): Names of components or serialization fields to exclude.
|
|
RETURNS (bytes): The serialized form of the `Language` object.
|
|
|
|
DOCS: https://spacy.io/api/language#to_bytes
|
|
"""
|
|
if disable is not None:
|
|
deprecation_warning(Warnings.W014)
|
|
exclude = disable
|
|
serializers = OrderedDict()
|
|
serializers["vocab"] = lambda: self.vocab.to_bytes()
|
|
serializers["tokenizer"] = lambda: self.tokenizer.to_bytes(exclude=["vocab"])
|
|
serializers["meta.json"] = lambda: srsly.json_dumps(self.meta)
|
|
for name, proc in self.pipeline:
|
|
if name in exclude:
|
|
continue
|
|
if not hasattr(proc, "to_bytes"):
|
|
continue
|
|
serializers[name] = lambda proc=proc: proc.to_bytes(exclude=["vocab"])
|
|
exclude = util.get_serialization_exclude(serializers, exclude, kwargs)
|
|
return util.to_bytes(serializers, exclude)
|
|
|
|
def from_bytes(self, bytes_data, exclude=tuple(), disable=None, **kwargs):
|
|
"""Load state from a binary string.
|
|
|
|
bytes_data (bytes): The data to load from.
|
|
exclude (list): Names of components or serialization fields to exclude.
|
|
RETURNS (Language): The `Language` object.
|
|
|
|
DOCS: https://spacy.io/api/language#from_bytes
|
|
"""
|
|
if disable is not None:
|
|
deprecation_warning(Warnings.W014)
|
|
exclude = disable
|
|
deserializers = OrderedDict()
|
|
deserializers["meta.json"] = lambda b: self.meta.update(srsly.json_loads(b))
|
|
deserializers["vocab"] = lambda b: self.vocab.from_bytes(
|
|
b
|
|
) and _fix_pretrained_vectors_name(self)
|
|
deserializers["tokenizer"] = lambda b: self.tokenizer.from_bytes(
|
|
b, exclude=["vocab"]
|
|
)
|
|
for name, proc in self.pipeline:
|
|
if name in exclude:
|
|
continue
|
|
if not hasattr(proc, "from_bytes"):
|
|
continue
|
|
deserializers[name] = lambda b, proc=proc: proc.from_bytes(
|
|
b, exclude=["vocab"]
|
|
)
|
|
exclude = util.get_serialization_exclude(deserializers, exclude, kwargs)
|
|
util.from_bytes(bytes_data, deserializers, exclude)
|
|
return self
|
|
|
|
|
|
class component(object):
|
|
"""Decorator for pipeline components. Can decorate both function components
|
|
and class components and will automatically register components in the
|
|
Language.factories. If the component is a class and needs access to the
|
|
nlp object or config parameters, it can expose a from_nlp classmethod
|
|
that takes the nlp object and **cfg arguments and returns the initialized
|
|
component.
|
|
"""
|
|
|
|
# NB: This decorator needs to live here, because it needs to write to
|
|
# Language.factories. All other solutions would cause circular import.
|
|
|
|
def __init__(self, name=None, assigns=tuple(), requires=tuple(), retokenizes=False):
|
|
"""Decorate a pipeline component.
|
|
|
|
name (unicode): Default component and factory name.
|
|
assigns (list): Attributes assigned by component, e.g. `["token.pos"]`.
|
|
requires (list): Attributes required by component, e.g. `["token.dep"]`.
|
|
retokenizes (bool): Whether the component changes the tokenization.
|
|
"""
|
|
self.name = name
|
|
self.assigns = validate_attrs(assigns)
|
|
self.requires = validate_attrs(requires)
|
|
self.retokenizes = retokenizes
|
|
|
|
def __call__(self, *args, **kwargs):
|
|
obj = args[0]
|
|
args = args[1:]
|
|
factory_name = self.name or util.get_component_name(obj)
|
|
obj.name = factory_name
|
|
obj.factory = factory_name
|
|
obj.assigns = self.assigns
|
|
obj.requires = self.requires
|
|
obj.retokenizes = self.retokenizes
|
|
|
|
def factory(nlp, **cfg):
|
|
if hasattr(obj, "from_nlp"):
|
|
return obj.from_nlp(nlp, **cfg)
|
|
elif isinstance(obj, class_types):
|
|
return obj()
|
|
return obj
|
|
|
|
Language.factories[obj.factory] = factory
|
|
return obj
|
|
|
|
|
|
def _fix_pretrained_vectors_name(nlp):
|
|
# TODO: Replace this once we handle vectors consistently as static
|
|
# data
|
|
if "vectors" in nlp.meta and nlp.meta["vectors"].get("name"):
|
|
nlp.vocab.vectors.name = nlp.meta["vectors"]["name"]
|
|
elif not nlp.vocab.vectors.size:
|
|
nlp.vocab.vectors.name = None
|
|
elif "name" in nlp.meta and "lang" in nlp.meta:
|
|
vectors_name = "%s_%s.vectors" % (nlp.meta["lang"], nlp.meta["name"])
|
|
nlp.vocab.vectors.name = vectors_name
|
|
else:
|
|
raise ValueError(Errors.E092)
|
|
if nlp.vocab.vectors.size != 0:
|
|
link_vectors_to_models(nlp.vocab)
|
|
for name, proc in nlp.pipeline:
|
|
if not hasattr(proc, "cfg"):
|
|
continue
|
|
proc.cfg.setdefault("deprecation_fixes", {})
|
|
proc.cfg["deprecation_fixes"]["vectors_name"] = nlp.vocab.vectors.name
|
|
|
|
|
|
class DisabledPipes(list):
|
|
"""Manager for temporary pipeline disabling."""
|
|
|
|
def __init__(self, nlp, *names):
|
|
self.nlp = nlp
|
|
self.names = names
|
|
# Important! Not deep copy -- we just want the container (but we also
|
|
# want to support people providing arbitrarily typed nlp.pipeline
|
|
# objects.)
|
|
self.original_pipeline = copy(nlp.pipeline)
|
|
list.__init__(self)
|
|
self.extend(nlp.remove_pipe(name) for name in names)
|
|
|
|
def __enter__(self):
|
|
return self
|
|
|
|
def __exit__(self, *args):
|
|
self.restore()
|
|
|
|
def restore(self):
|
|
"""Restore the pipeline to its state when DisabledPipes was created."""
|
|
current, self.nlp.pipeline = self.nlp.pipeline, self.original_pipeline
|
|
unexpected = [name for name, pipe in current if not self.nlp.has_pipe(name)]
|
|
if unexpected:
|
|
# Don't change the pipeline if we're raising an error.
|
|
self.nlp.pipeline = current
|
|
raise ValueError(Errors.E008.format(names=unexpected))
|
|
self[:] = []
|
|
|
|
|
|
def _pipe(docs, proc, kwargs):
|
|
# We added some args for pipe that __call__ doesn't expect.
|
|
kwargs = dict(kwargs)
|
|
for arg in ["n_threads", "batch_size"]:
|
|
if arg in kwargs:
|
|
kwargs.pop(arg)
|
|
for doc in docs:
|
|
doc = proc(doc, **kwargs)
|
|
yield doc
|
|
|
|
|
|
def _apply_pipes(make_doc, pipes, reciever, sender):
|
|
"""Worker for Language.pipe
|
|
|
|
receiver (multiprocessing.Connection): Pipe to receive text. Usually
|
|
created by `multiprocessing.Pipe()`
|
|
sender (multiprocessing.Connection): Pipe to send doc. Usually created by
|
|
`multiprocessing.Pipe()`
|
|
"""
|
|
while True:
|
|
texts = reciever.get()
|
|
docs = (make_doc(text) for text in texts)
|
|
for pipe in pipes:
|
|
docs = pipe(docs)
|
|
# Connection does not accept unpickable objects, so send list.
|
|
sender.send([doc.to_bytes() for doc in docs])
|
|
|
|
|
|
class _Sender:
|
|
"""Util for sending data to multiprocessing workers in Language.pipe"""
|
|
|
|
def __init__(self, data, queues, chunk_size):
|
|
self.data = iter(data)
|
|
self.queues = iter(cycle(queues))
|
|
self.chunk_size = chunk_size
|
|
self.count = 0
|
|
|
|
def send(self):
|
|
"""Send chunk_size items from self.data to channels."""
|
|
for item, q in itertools.islice(
|
|
zip(self.data, cycle(self.queues)), self.chunk_size
|
|
):
|
|
# cycle channels so that distribute the texts evenly
|
|
q.put(item)
|
|
|
|
def step(self):
|
|
"""Tell sender that comsumed one item.
|
|
|
|
Data is sent to the workers after every chunk_size calls."""
|
|
self.count += 1
|
|
if self.count >= self.chunk_size:
|
|
self.count = 0
|
|
self.send()
|