mirror of
https://github.com/explosion/spaCy.git
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500 lines
16 KiB
Cython
500 lines
16 KiB
Cython
# cython: embedsignature=True
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from preshed.maps cimport PreshMap
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from preshed.counter cimport PreshCounter
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from .vocab cimport EMPTY_LEXEME
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from .typedefs cimport attr_id_t, attr_t
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from .typedefs cimport LEMMA
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from .typedefs cimport ID, ORTH, NORM, LOWER, SHAPE, PREFIX, SUFFIX, LENGTH, CLUSTER
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from .typedefs cimport POS, LEMMA
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from .parts_of_speech import UNIV_POS_NAMES
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from .lexeme cimport check_flag
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from unidecode import unidecode
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cimport numpy
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import numpy
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cimport cython
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from cpython.mem cimport PyMem_Malloc, PyMem_Free
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from libc.string cimport memcpy
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DEF PADDING = 5
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cdef int bounds_check(int i, int length, int padding) except -1:
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if (i + padding) < 0:
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raise IndexError
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if (i - padding) >= length:
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raise IndexError
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cdef attr_t get_token_attr(const TokenC* token, attr_id_t feat_name) nogil:
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if feat_name == LEMMA:
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return token.lemma
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elif feat_name == POS:
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return token.pos
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else:
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return get_lex_attr(token.lex, feat_name)
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cdef attr_t get_lex_attr(const LexemeC* lex, attr_id_t feat_name) nogil:
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if feat_name < (sizeof(flags_t) * 8):
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return check_flag(lex, feat_name)
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elif feat_name == ID:
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return lex.id
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elif feat_name == ORTH:
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return lex.orth
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elif feat_name == LOWER:
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return lex.lower
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elif feat_name == NORM:
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return lex.norm
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elif feat_name == SHAPE:
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return lex.shape
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elif feat_name == PREFIX:
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return lex.prefix
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elif feat_name == SUFFIX:
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return lex.suffix
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elif feat_name == LENGTH:
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return lex.length
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elif feat_name == CLUSTER:
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return lex.cluster
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else:
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return 0
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cdef class Tokens:
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"""
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Container class for annotated text. Constructed via English.__call__ or
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Tokenizer.__call__.
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"""
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def __cinit__(self, Vocab vocab, unicode string):
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self.vocab = vocab
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self._string = string
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string_length = len(string)
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if string_length >= 3:
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size = int(string_length / 3.0)
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else:
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size = 5
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self.mem = Pool()
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# Guarantee self.lex[i-x], for any i >= 0 and x < padding is in bounds
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# However, we need to remember the true starting places, so that we can
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# realloc.
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data_start = <TokenC*>self.mem.alloc(size + (PADDING*2), sizeof(TokenC))
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cdef int i
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for i in range(size + (PADDING*2)):
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data_start[i].lex = &EMPTY_LEXEME
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self.data = data_start + PADDING
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self.max_length = size
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self.length = 0
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self.is_tagged = False
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self.is_parsed = False
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self._py_tokens = []
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self._tag_strings = tuple() # These will be set by the POS tagger and parser
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self._dep_strings = tuple() # The strings are arbitrary and model-specific.
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self._ent_strings = tuple() # TODO: Clean this up
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def __getitem__(self, object i):
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"""Retrieve a token.
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The Python Token objects are created lazily from internal C data, and
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cached in _py_tokens
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Returns:
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token (Token):
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"""
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if i < 0:
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i = self.length + i
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bounds_check(i, self.length, PADDING)
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return Token.cinit(self.vocab, self._string,
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&self.data[i], i, self.length,
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self, self._tag_strings, self._dep_strings)
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def __iter__(self):
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"""Iterate over the tokens.
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Yields:
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token (Token):
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"""
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for i in range(self.length):
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yield Token.cinit(self.vocab, self._string,
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&self.data[i], i, self.length,
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self, self._tag_strings, self._dep_strings)
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def __len__(self):
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return self.length
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def __unicode__(self):
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cdef const TokenC* last = &self.data[self.length - 1]
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return self._string[:last.idx + last.lex.length]
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property ents:
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def __get__(self):
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cdef int i
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cdef const TokenC* token
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cdef int start = -1
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cdef object label = None
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for i in range(self.length):
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token = &self.data[i]
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if token.ent_iob == 1:
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assert start != -1
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pass
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elif token.ent_iob == 2:
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if start != -1:
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yield (start, i, label)
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start = -1
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label = None
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elif token.ent_iob == 3:
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start = i
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label = self._ent_strings[token.ent_type]
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if start != -1:
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yield (start, self.length, label)
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cdef int push_back(self, int idx, LexemeOrToken lex_or_tok) except -1:
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if self.length == self.max_length:
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self._realloc(self.length * 2)
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cdef TokenC* t = &self.data[self.length]
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if LexemeOrToken is TokenC_ptr:
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t[0] = lex_or_tok[0]
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else:
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t.lex = lex_or_tok
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t.idx = idx
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self.length += 1
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self._py_tokens.append(None)
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return idx + t.lex.length
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@cython.boundscheck(False)
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cpdef long[:,:] to_array(self, object py_attr_ids):
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"""Given a list of M attribute IDs, export the tokens to a numpy ndarray
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of shape N*M, where N is the length of the sentence.
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Arguments:
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attr_ids (list[int]): A list of attribute ID ints.
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Returns:
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feat_array (numpy.ndarray[long, ndim=2]):
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A feature matrix, with one row per word, and one column per attribute
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indicated in the input attr_ids.
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"""
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cdef int i, j
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cdef attr_id_t feature
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cdef numpy.ndarray[long, ndim=2] output
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# Make an array from the attributes --- otherwise our inner loop is Python
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# dict iteration.
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cdef numpy.ndarray[long, ndim=1] attr_ids = numpy.asarray(py_attr_ids)
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output = numpy.ndarray(shape=(self.length, len(attr_ids)), dtype=numpy.int)
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for i in range(self.length):
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for j, feature in enumerate(attr_ids):
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output[i, j] = get_token_attr(&self.data[i], feature)
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return output
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def count_by(self, attr_id_t attr_id, exclude=None):
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"""Produce a dict of {attribute (int): count (ints)} frequencies, keyed
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by the values of the given attribute ID.
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>>> from spacy.en import English, attrs
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>>> nlp = English()
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>>> tokens = nlp(u'apple apple orange banana')
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>>> tokens.count_by(attrs.ORTH)
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{12800L: 1, 11880L: 2, 7561L: 1}
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>>> tokens.to_array([attrs.ORTH])
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array([[11880],
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[11880],
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[ 7561],
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[12800]])
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"""
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cdef int i
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cdef attr_t attr
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cdef size_t count
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cdef PreshCounter counts = PreshCounter(2 ** 8)
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for i in range(self.length):
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if exclude is not None and exclude(self[i]):
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continue
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attr = get_token_attr(&self.data[i], attr_id)
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counts.inc(attr, 1)
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return dict(counts)
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def _realloc(self, new_size):
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self.max_length = new_size
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n = new_size + (PADDING * 2)
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# What we're storing is a "padded" array. We've jumped forward PADDING
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# places, and are storing the pointer to that. This way, we can access
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# words out-of-bounds, and get out-of-bounds markers.
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# Now that we want to realloc, we need the address of the true start,
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# so we jump the pointer back PADDING places.
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cdef TokenC* data_start = self.data - PADDING
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data_start = <TokenC*>self.mem.realloc(data_start, n * sizeof(TokenC))
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self.data = data_start + PADDING
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cdef int i
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for i in range(self.length, self.max_length + PADDING):
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self.data[i].lex = &EMPTY_LEXEME
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@property
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def sents(self):
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"""This is really only a place-holder for a proper solution."""
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cdef int i
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cdef Tokens sent = Tokens(self.vocab, self._string[self.data[0].idx:])
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#cdef attr_t period = self.vocab.strings['.']
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#cdef attr_t question = self.vocab.strings['?']
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#cdef attr_t exclamation = self.vocab.strings['!']
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spans = []
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start = None
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for i in range(self.length):
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if start is None:
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start = i
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if self.data[i].sent_end:
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spans.append((start, i+1))
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start = None
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#if self.data[i].lex.orth == period or self.data[i].lex.orth == exclamation or \
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# self.data[i].lex.orth == question:
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# spans.append((start, i+1))
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# start = None
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if start is not None:
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spans.append((start, self.length))
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return spans
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cdef int set_parse(self, const TokenC* parsed, dict label_ids) except -1:
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self._py_tokens = [None] * self.length
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self.is_parsed = True
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for i in range(self.length):
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self.data[i] = parsed[i]
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dep_strings = [None] * len(label_ids)
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for dep_string, id_ in label_ids.items():
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dep_strings[id_] = dep_string
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self._dep_strings = tuple(dep_strings)
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cdef class Token:
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"""An individual token --- i.e. a word, a punctuation symbol, etc. Created
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via Tokens.__getitem__ and Tokens.__iter__.
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"""
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def __cinit__(self, Vocab vocab, unicode string):
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self.vocab = vocab
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self._string = string
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def __dealloc__(self):
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if self._owns_c_data:
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# Cast through const, if we own the data
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PyMem_Free(<void*>self.c)
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def __len__(self):
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return self.c.lex.length
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def __unicode__(self):
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return self.string
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cpdef bint check_flag(self, attr_id_t flag_id) except -1:
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return check_flag(self.c.lex, flag_id)
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cdef int take_ownership_of_c_data(self) except -1:
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owned_data = <TokenC*>PyMem_Malloc(sizeof(TokenC) * self.array_len)
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memcpy(owned_data, self.c, sizeof(TokenC) * self.array_len)
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self.c = owned_data
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self._owns_c_data = True
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def nbor(self, int i=1):
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return Token.cinit(self.vocab, self._string,
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self.c, self.i, self.array_len,
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self._seq, self._tag_strings, self._dep_strings)
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property string:
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def __get__(self):
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cdef int next_idx = (self.c + 1).idx
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if next_idx < self.c.idx:
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next_idx = self.c.idx + self.c.lex.length
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return self._string[self.c.idx:next_idx]
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property prob:
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def __get__(self):
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return self.c.lex.prob
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property idx:
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def __get__(self):
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return self.c.idx
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property cluster:
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def __get__(self):
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return self.c.lex.cluster
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property orth:
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def __get__(self):
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return self.c.lex.orth
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property lower:
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def __get__(self):
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return self.c.lex.lower
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property norm:
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def __get__(self):
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return self.c.lex.norm
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property shape:
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def __get__(self):
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return self.c.lex.shape
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property prefix:
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def __get__(self):
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return self.c.lex.prefix
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property suffix:
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def __get__(self):
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return self.c.lex.suffix
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property lemma:
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def __get__(self):
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return self.c.lemma
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property pos:
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def __get__(self):
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return self.c.pos
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property tag:
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def __get__(self):
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return self.c.tag
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property dep:
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def __get__(self):
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return self.c.dep
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property repvec:
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def __get__(self):
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return numpy.asarray(<float[:300,]> self.c.lex.repvec)
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property n_lefts:
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def __get__(self):
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cdef int n = 0
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cdef const TokenC* ptr = self.c - self.i
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while ptr != self.c:
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if ptr + ptr.head == self.c:
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n += 1
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ptr += 1
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return n
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property n_rights:
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def __get__(self):
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cdef int n = 0
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cdef const TokenC* ptr = self.c + (self.array_len - self.i)
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while ptr != self.c:
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if ptr + ptr.head == self.c:
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n += 1
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ptr -= 1
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return n
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property lefts:
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def __get__(self):
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"""The leftward immediate children of the word, in the syntactic
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dependency parse.
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"""
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cdef const TokenC* ptr = self.c - self.i
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while ptr < self.c:
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# If this head is still to the right of us, we can skip to it
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# No token that's between this token and this head could be our
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# child.
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if (ptr.head >= 1) and (ptr + ptr.head) < self.c:
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ptr += ptr.head
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elif ptr + ptr.head == self.c:
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yield Token.cinit(self.vocab, self._string,
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ptr, ptr - (self.c - self.i), self.array_len,
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self._seq, self._tag_strings, self._dep_strings)
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ptr += 1
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else:
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ptr += 1
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property rights:
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def __get__(self):
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"""The rightward immediate children of the word, in the syntactic
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dependency parse."""
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cdef const TokenC* ptr = (self.c - self.i) + (self.array_len - 1)
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while ptr > self.c:
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# If this head is still to the right of us, we can skip to it
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# No token that's between this token and this head could be our
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# child.
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if (ptr.head < 0) and ((ptr + ptr.head) > self.c):
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ptr += ptr.head
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elif ptr + ptr.head == self.c:
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yield Token.cinit(self.vocab, self._string,
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ptr, ptr - (self.c - self.i), self.array_len,
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self._seq, self._tag_strings, self._dep_strings)
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ptr -= 1
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else:
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ptr -= 1
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property children:
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def __get__(self):
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yield from self.lefts
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yield from self.rights
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property subtree:
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def __get__(self):
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for word in self.lefts:
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yield from word.subtree
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yield self
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for word in self.rights:
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yield from word.subtree
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property head:
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def __get__(self):
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"""The token predicted by the parser to be the head of the current token."""
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return Token.cinit(self.vocab, self._string,
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self.c + self.c.head, self.i + self.c.head, self.array_len,
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self._seq, self._tag_strings, self._dep_strings)
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property whitespace_:
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def __get__(self):
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return self.string[self.c.lex.length:]
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property orth_:
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def __get__(self):
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return self.vocab.strings[self.c.lex.orth]
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property lower_:
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def __get__(self):
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return self.vocab.strings[self.c.lex.lower]
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property norm_:
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def __get__(self):
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return self.vocab.strings[self.c.lex.norm]
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property shape_:
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def __get__(self):
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return self.vocab.strings[self.c.lex.shape]
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property prefix_:
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def __get__(self):
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return self.vocab.strings[self.c.lex.prefix]
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property suffix_:
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def __get__(self):
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return self.vocab.strings[self.c.lex.suffix]
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property lemma_:
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def __get__(self):
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return self.vocab.strings[self.c.lemma]
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property pos_:
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def __get__(self):
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return _pos_id_to_string[self.c.pos]
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property tag_:
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def __get__(self):
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return self._tag_strings[self.c.tag]
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property dep_:
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def __get__(self):
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return self._dep_strings[self.c.dep]
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_pos_id_to_string = {id_: string for string, id_ in UNIV_POS_NAMES.items()}
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_parse_unset_error = """Text has not been parsed, so cannot be accessed.
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Check that the parser data is installed. Run "python -m spacy.en.download" if not.
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Check whether parse=False in the call to English.__call__
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"""
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