spaCy/spacy/pipeline/tagger.pyx
Matthew Honnibal 5bebbf7550
Python 3.13 support (#13823)
In order to support Python 3.13, we had to migrate to Cython 3.0. This caused some tricky interaction with our Pydantic usage, because Cython 3 uses the from __future__ import annotations semantics, which causes type annotations to be saved as strings.

The end result is that we can't have Language.factory decorated functions in Cython modules anymore, as the Language.factory decorator expects to inspect the signature of the functions and build a Pydantic model. If the function is implemented in Cython, an error is raised because the type is not resolved.

To address this I've moved the factory functions into a new module, spacy.pipeline.factories. I've added __getattr__ importlib hooks to the previous locations, in case anyone was importing these functions directly. The change should have no backwards compatibility implications.

Along the way I've also refactored the registration of functions for the config. Previously these ran as import-time side-effects, using the registry decorator. I've created instead a new module spacy.registrations. When the registry is accessed it calls a function ensure_populated(), which cases the registrations to occur.

I've made a similar change to the Language.factory registrations in the new spacy.pipeline.factories module.

I want to remove these import-time side-effects so that we can speed up the loading time of the library, which can be especially painful on the CLI. I also find that I'm often working to track down the implementations of functions referenced by strings in the config. Having the registrations all happen in one place will make this easier.

With these changes I've fortunately avoided the need to migrate to Pydantic v2 properly --- we're still using the v1 compatibility shim. We might not be able to hold out forever though: Pydantic (reasonably) aren't actively supporting the v1 shims. I put a lot of work into v2 migration when investigating the 3.13 support, and it's definitely challenging. In any case, it's a relief that we don't have to do the v2 migration at the same time as the Cython 3.0/Python 3.13 support.
2025-05-22 13:47:21 +02:00

304 lines
11 KiB
Cython

# cython: infer_types=True, binding=True
import importlib
import sys
from itertools import islice
from typing import Callable, Optional
import numpy
from thinc.api import Config, Model, SequenceCategoricalCrossentropy, set_dropout_rate
from ..tokens.doc cimport Doc
from .. import util
from ..errors import Errors
from ..language import Language
from ..scorer import Scorer
from ..training import validate_examples, validate_get_examples
from ..util import registry
from .trainable_pipe import TrainablePipe
# See #9050
BACKWARD_OVERWRITE = False
default_model_config = """
[model]
@architectures = "spacy.Tagger.v2"
[model.tok2vec]
@architectures = "spacy.HashEmbedCNN.v2"
pretrained_vectors = null
width = 96
depth = 4
embed_size = 2000
window_size = 1
maxout_pieces = 3
subword_features = true
"""
DEFAULT_TAGGER_MODEL = Config().from_str(default_model_config)["model"]
def tagger_score(examples, **kwargs):
return Scorer.score_token_attr(examples, "tag", **kwargs)
def make_tagger_scorer():
return tagger_score
class Tagger(TrainablePipe):
"""Pipeline component for part-of-speech tagging.
DOCS: https://spacy.io/api/tagger
"""
def __init__(
self,
vocab,
model,
name="tagger",
*,
overwrite=BACKWARD_OVERWRITE,
scorer=tagger_score,
neg_prefix="!",
label_smoothing=0.0,
):
"""Initialize a part-of-speech tagger.
vocab (Vocab): The shared vocabulary.
model (thinc.api.Model): The Thinc Model powering the pipeline component.
name (str): The component instance name, used to add entries to the
losses during training.
scorer (Optional[Callable]): The scoring method. Defaults to
Scorer.score_token_attr for the attribute "tag".
DOCS: https://spacy.io/api/tagger#init
"""
self.vocab = vocab
self.model = model
self.name = name
self._rehearsal_model = None
cfg = {"labels": [], "overwrite": overwrite, "neg_prefix": neg_prefix, "label_smoothing": label_smoothing}
self.cfg = dict(sorted(cfg.items()))
self.scorer = scorer
@property
def labels(self):
"""The labels currently added to the component. Note that even for a
blank component, this will always include the built-in coarse-grained
part-of-speech tags by default.
RETURNS (Tuple[str]): The labels.
DOCS: https://spacy.io/api/tagger#labels
"""
return tuple(self.cfg["labels"])
@property
def label_data(self):
"""Data about the labels currently added to the component."""
return tuple(self.cfg["labels"])
def predict(self, docs):
"""Apply the pipeline's model to a batch of docs, without modifying them.
docs (Iterable[Doc]): The documents to predict.
RETURNS: The models prediction for each document.
DOCS: https://spacy.io/api/tagger#predict
"""
if not any(len(doc) for doc in docs):
# Handle cases where there are no tokens in any docs.
n_labels = len(self.labels)
guesses = [self.model.ops.alloc((0, n_labels)) for doc in docs]
assert len(guesses) == len(docs)
return guesses
scores = self.model.predict(docs)
assert len(scores) == len(docs), (len(scores), len(docs))
guesses = self._scores2guesses(scores)
assert len(guesses) == len(docs)
return guesses
def _scores2guesses(self, scores):
guesses = []
for doc_scores in scores:
doc_guesses = doc_scores.argmax(axis=1)
if not isinstance(doc_guesses, numpy.ndarray):
doc_guesses = doc_guesses.get()
guesses.append(doc_guesses)
return guesses
def set_annotations(self, docs, batch_tag_ids):
"""Modify a batch of documents, using pre-computed scores.
docs (Iterable[Doc]): The documents to modify.
batch_tag_ids: The IDs to set, produced by Tagger.predict.
DOCS: https://spacy.io/api/tagger#set_annotations
"""
if isinstance(docs, Doc):
docs = [docs]
cdef Doc doc
cdef bint overwrite = self.cfg["overwrite"]
labels = self.labels
for i, doc in enumerate(docs):
doc_tag_ids = batch_tag_ids[i]
if hasattr(doc_tag_ids, "get"):
doc_tag_ids = doc_tag_ids.get()
for j, tag_id in enumerate(doc_tag_ids):
if doc.c[j].tag == 0 or overwrite:
doc.c[j].tag = self.vocab.strings[labels[tag_id]]
def update(self, examples, *, drop=0., sgd=None, losses=None):
"""Learn from a batch of documents and gold-standard information,
updating the pipe's model. Delegates to predict and get_loss.
examples (Iterable[Example]): A batch of Example objects.
drop (float): The dropout rate.
sgd (thinc.api.Optimizer): The optimizer.
losses (Dict[str, float]): Optional record of the loss during training.
Updated using the component name as the key.
RETURNS (Dict[str, float]): The updated losses dictionary.
DOCS: https://spacy.io/api/tagger#update
"""
if losses is None:
losses = {}
losses.setdefault(self.name, 0.0)
validate_examples(examples, "Tagger.update")
if not any(len(eg.predicted) if eg.predicted else 0 for eg in examples):
# Handle cases where there are no tokens in any docs.
return losses
set_dropout_rate(self.model, drop)
tag_scores, bp_tag_scores = self.model.begin_update([eg.predicted for eg in examples])
for sc in tag_scores:
if self.model.ops.xp.isnan(sc.sum()):
raise ValueError(Errors.E940)
loss, d_tag_scores = self.get_loss(examples, tag_scores)
bp_tag_scores(d_tag_scores)
if sgd not in (None, False):
self.finish_update(sgd)
losses[self.name] += loss
return losses
def rehearse(self, examples, *, drop=0., sgd=None, losses=None):
"""Perform a "rehearsal" update from a batch of data. Rehearsal updates
teach the current model to make predictions similar to an initial model,
to try to address the "catastrophic forgetting" problem. This feature is
experimental.
examples (Iterable[Example]): A batch of Example objects.
drop (float): The dropout rate.
sgd (thinc.api.Optimizer): The optimizer.
losses (Dict[str, float]): Optional record of the loss during training.
Updated using the component name as the key.
RETURNS (Dict[str, float]): The updated losses dictionary.
DOCS: https://spacy.io/api/tagger#rehearse
"""
loss_func = SequenceCategoricalCrossentropy()
if losses is None:
losses = {}
losses.setdefault(self.name, 0.0)
validate_examples(examples, "Tagger.rehearse")
docs = [eg.predicted for eg in examples]
if self._rehearsal_model is None:
return losses
if not any(len(doc) for doc in docs):
# Handle cases where there are no tokens in any docs.
return losses
set_dropout_rate(self.model, drop)
tag_scores, bp_tag_scores = self.model.begin_update(docs)
tutor_tag_scores, _ = self._rehearsal_model.begin_update(docs)
grads, loss = loss_func(tag_scores, tutor_tag_scores)
bp_tag_scores(grads)
self.finish_update(sgd)
losses[self.name] += loss
return losses
def get_loss(self, examples, scores):
"""Find the loss and gradient of loss for the batch of documents and
their predicted scores.
examples (Iterable[Examples]): The batch of examples.
scores: Scores representing the model's predictions.
RETURNS (Tuple[float, float]): The loss and the gradient.
DOCS: https://spacy.io/api/tagger#get_loss
"""
validate_examples(examples, "Tagger.get_loss")
loss_func = SequenceCategoricalCrossentropy(names=self.labels, normalize=False, neg_prefix=self.cfg["neg_prefix"], label_smoothing=self.cfg["label_smoothing"])
# Convert empty tag "" to missing value None so that both misaligned
# tokens and tokens with missing annotation have the default missing
# value None.
truths = []
for eg in examples:
eg_truths = [tag if tag is not "" else None for tag in eg.get_aligned("TAG", as_string=True)]
truths.append(eg_truths)
d_scores, loss = loss_func(scores, truths)
if self.model.ops.xp.isnan(loss):
raise ValueError(Errors.E910.format(name=self.name))
return float(loss), d_scores
def initialize(self, get_examples, *, nlp=None, labels=None):
"""Initialize the pipe for training, using a representative set
of data examples.
get_examples (Callable[[], Iterable[Example]]): Function that
returns a representative sample of gold-standard Example objects..
nlp (Language): The current nlp object the component is part of.
labels: The labels to add to the component, typically generated by the
`init labels` command. If no labels are provided, the get_examples
callback is used to extract the labels from the data.
DOCS: https://spacy.io/api/tagger#initialize
"""
validate_get_examples(get_examples, "Tagger.initialize")
util.check_lexeme_norms(self.vocab, "tagger")
if labels is not None:
for tag in labels:
self.add_label(tag)
else:
tags = set()
for example in get_examples():
for token in example.y:
if token.tag_:
tags.add(token.tag_)
for tag in sorted(tags):
self.add_label(tag)
doc_sample = []
label_sample = []
for example in islice(get_examples(), 10):
doc_sample.append(example.x)
gold_tags = example.get_aligned("TAG", as_string=True)
gold_array = [[1.0 if tag == gold_tag else 0.0 for tag in self.labels] for gold_tag in gold_tags]
label_sample.append(self.model.ops.asarray(gold_array, dtype="float32"))
self._require_labels()
assert len(doc_sample) > 0, Errors.E923.format(name=self.name)
assert len(label_sample) > 0, Errors.E923.format(name=self.name)
self.model.initialize(X=doc_sample, Y=label_sample)
def add_label(self, label):
"""Add a new label to the pipe.
label (str): The label to add.
RETURNS (int): 0 if label is already present, otherwise 1.
DOCS: https://spacy.io/api/tagger#add_label
"""
if not isinstance(label, str):
raise ValueError(Errors.E187)
if label in self.labels:
return 0
self._allow_extra_label()
self.cfg["labels"].append(label)
self.vocab.strings.add(label)
return 1
# Setup backwards compatibility hook for factories
def __getattr__(name):
if name == "make_tagger":
module = importlib.import_module("spacy.pipeline.factories")
return module.make_tagger
raise AttributeError(f"module {__name__} has no attribute {name}")