Merge pull request #680 from hugovk/spider

Add tests for SPIDER image files
This commit is contained in:
wiredfool 2014-05-30 08:46:33 -07:00
commit 60e2eaa5e9
3 changed files with 86 additions and 34 deletions

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@ -36,18 +36,24 @@
from __future__ import print_function
from PIL import Image, ImageFile
import os, struct, sys
import os
import struct
import sys
def isInt(f):
try:
i = int(f)
if f-i == 0: return 1
else: return 0
if f-i == 0:
return 1
else:
return 0
except:
return 0
iforms = [1, 3, -11, -12, -21, -22]
# There is no magic number to identify Spider files, so just check a
# series of header locations to see if they have reasonable values.
# Returns no.of bytes in the header, if it is a valid Spider header,
@ -57,28 +63,30 @@ def isSpiderHeader(t):
h = (99,) + t # add 1 value so can use spider header index start=1
# header values 1,2,5,12,13,22,23 should be integers
for i in [1, 2, 5, 12, 13, 22, 23]:
if not isInt(h[i]): return 0
if not isInt(h[i]):
return 0
# check iform
iform = int(h[5])
if not iform in iforms: return 0
if iform not in iforms:
return 0
# check other header values
labrec = int(h[13]) # no. records in file header
labbyt = int(h[22]) # total no. of bytes in header
lenbyt = int(h[23]) # record length in bytes
# print "labrec = %d, labbyt = %d, lenbyt = %d" % (labrec,labbyt,lenbyt)
if labbyt != (labrec * lenbyt): return 0
if labbyt != (labrec * lenbyt):
return 0
# looks like a valid header
return labbyt
def isSpiderImage(filename):
fp = open(filename, 'rb')
f = fp.read(92) # read 23 * 4 bytes
fp.close()
bigendian = 1
t = struct.unpack('>23f', f) # try big-endian first
hdrlen = isSpiderHeader(t)
if hdrlen == 0:
bigendian = 0
t = struct.unpack('<23f', f) # little-endian
hdrlen = isSpiderHeader(t)
return hdrlen
@ -141,7 +149,8 @@ class SpiderImageFile(ImageFile.ImageFile):
self.rawmode = "F;32F"
self.mode = "F"
self.tile = [("raw", (0, 0) + self.size, offset,
self.tile = [
("raw", (0, 0) + self.size, offset,
(self.rawmode, 0, 1))]
self.__fp = self.fp # FIXME: hack
@ -176,6 +185,7 @@ class SpiderImageFile(ImageFile.ImageFile):
from PIL import ImageTk
return ImageTk.PhotoImage(self.convert2byte(), palette=256)
# --------------------------------------------------------------------
# Image series
@ -200,6 +210,7 @@ def loadImageSeries(filelist=None):
imglist.append(im)
return imglist
# --------------------------------------------------------------------
# For saving images in Spider format
@ -207,10 +218,11 @@ def makeSpiderHeader(im):
nsam, nrow = im.size
lenbyt = nsam * 4 # There are labrec records in the header
labrec = 1024 / lenbyt
if 1024%lenbyt != 0: labrec += 1
if 1024 % lenbyt != 0:
labrec += 1
labbyt = labrec * lenbyt
hdr = []
nvalues = labbyt / 4
nvalues = int(labbyt / 4)
for i in range(nvalues):
hdr.append(0.0)
@ -235,6 +247,7 @@ def makeSpiderHeader(im):
hdrstr.append(struct.pack('f', v))
return hdrstr
def _save(im, fp, filename):
if im.mode[0] != "F":
im = im.convert('F')
@ -255,6 +268,7 @@ def _save(im, fp, filename):
fp.close()
def _save_spider(im, fp, filename):
# get the filename extension and register it with Image
fn, ext = os.path.splitext(filename)
@ -292,5 +306,7 @@ if __name__ == "__main__":
if outfile != "":
# perform some image operation
im = im.transpose(Image.FLIP_LEFT_RIGHT)
print("saving a flipped version of %s as %s " % (os.path.basename(filename), outfile))
print(
"saving a flipped version of %s as %s " %
(os.path.basename(filename), outfile))
im.save(outfile, "SPIDER")

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Tests/images/lena.spider Normal file

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36
Tests/test_file_spider.py Normal file
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@ -0,0 +1,36 @@
from tester import *
from PIL import Image
from PIL import SpiderImagePlugin
test_file = "Tests/images/lena.spider"
def test_sanity():
im = Image.open(test_file)
im.load()
assert_equal(im.mode, "F")
assert_equal(im.size, (128, 128))
assert_equal(im.format, "SPIDER")
def test_save():
# Arrange
temp = tempfile('temp.spider')
im = lena()
# Act
im.save(temp, "SPIDER")
# Assert
im2 = Image.open(temp)
assert_equal(im2.mode, "F")
assert_equal(im2.size, (128, 128))
assert_equal(im2.format, "SPIDER")
def test_isSpiderImage():
assert_true(SpiderImagePlugin.isSpiderImage(test_file))
# End of file