spaCy/spacy/tests/test_misc.py

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2017-04-23 22:06:46 +03:00
import pytest
import os
import ctypes
💫 Refactor test suite (#2568) ## Description Related issues: #2379 (should be fixed by separating model tests) * **total execution time down from > 300 seconds to under 60 seconds** 🎉 * removed all model-specific tests that could only really be run manually anyway – those will now live in a separate test suite in the [`spacy-models`](https://github.com/explosion/spacy-models) repository and are already integrated into our new model training infrastructure * changed all relative imports to absolute imports to prepare for moving the test suite from `/spacy/tests` to `/tests` (it'll now always test against the installed version) * merged old regression tests into collections, e.g. `test_issue1001-1500.py` (about 90% of the regression tests are very short anyways) * tidied up and rewrote existing tests wherever possible ### Todo - [ ] move tests to `/tests` and adjust CI commands accordingly - [x] move model test suite from internal repo to `spacy-models` - [x] ~~investigate why `pipeline/test_textcat.py` is flakey~~ - [x] review old regression tests (leftover files) and see if they can be merged, simplified or deleted - [ ] update documentation on how to run tests ### Types of change enhancement, tests ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [ ] My changes don't require a change to the documentation, or if they do, I've added all required information.
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from pathlib import Path
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from spacy.about import __version__ as spacy_version
💫 Refactor test suite (#2568) ## Description Related issues: #2379 (should be fixed by separating model tests) * **total execution time down from > 300 seconds to under 60 seconds** 🎉 * removed all model-specific tests that could only really be run manually anyway – those will now live in a separate test suite in the [`spacy-models`](https://github.com/explosion/spacy-models) repository and are already integrated into our new model training infrastructure * changed all relative imports to absolute imports to prepare for moving the test suite from `/spacy/tests` to `/tests` (it'll now always test against the installed version) * merged old regression tests into collections, e.g. `test_issue1001-1500.py` (about 90% of the regression tests are very short anyways) * tidied up and rewrote existing tests wherever possible ### Todo - [ ] move tests to `/tests` and adjust CI commands accordingly - [x] move model test suite from internal repo to `spacy-models` - [x] ~~investigate why `pipeline/test_textcat.py` is flakey~~ - [x] review old regression tests (leftover files) and see if they can be merged, simplified or deleted - [ ] update documentation on how to run tests ### Types of change enhancement, tests ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [ ] My changes don't require a change to the documentation, or if they do, I've added all required information.
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from spacy import util
💫 Port master changes over to develop (#2979) * Create aryaprabhudesai.md (#2681) * Update _install.jade (#2688) Typo fix: "models" -> "model" * Add FAC to spacy.explain (resolves #2706) * Remove docstrings for deprecated arguments (see #2703) * When calling getoption() in conftest.py, pass a default option (#2709) * When calling getoption() in conftest.py, pass a default option This is necessary to allow testing an installed spacy by running: pytest --pyargs spacy * Add contributor agreement * update bengali token rules for hyphen and digits (#2731) * Less norm computations in token similarity (#2730) * Less norm computations in token similarity * Contributor agreement * Remove ')' for clarity (#2737) Sorry, don't mean to be nitpicky, I just noticed this when going through the CLI and thought it was a quick fix. That said, if this was intention than please let me know. * added contributor agreement for mbkupfer (#2738) * Basic support for Telugu language (#2751) * Lex _attrs for polish language (#2750) * Signed spaCy contributor agreement * Added polish version of english lex_attrs * Introduces a bulk merge function, in order to solve issue #653 (#2696) * Fix comment * Introduce bulk merge to increase performance on many span merges * Sign contributor agreement * Implement pull request suggestions * Describe converters more explicitly (see #2643) * Add multi-threading note to Language.pipe (resolves #2582) [ci skip] * Fix formatting * Fix dependency scheme docs (closes #2705) [ci skip] * Don't set stop word in example (closes #2657) [ci skip] * Add words to portuguese language _num_words (#2759) * Add words to portuguese language _num_words * Add words to portuguese language _num_words * Update Indonesian model (#2752) * adding e-KTP in tokenizer exceptions list * add exception token * removing lines with containing space as it won't matter since we use .split() method in the end, added new tokens in exception * add tokenizer exceptions list * combining base_norms with norm_exceptions * adding norm_exception * fix double key in lemmatizer * remove unused import on punctuation.py * reformat stop_words to reduce number of lines, improve readibility * updating tokenizer exception * implement is_currency for lang/id * adding orth_first_upper in tokenizer_exceptions * update the norm_exception list * remove bunch of abbreviations * adding contributors file * Fixed spaCy+Keras example (#2763) * bug fixes in keras example * created contributor agreement * Adding French hyphenated first name (#2786) * Fix typo (closes #2784) * Fix typo (#2795) [ci skip] Fixed typo on line 6 "regcognizer --> recognizer" * Adding basic support for Sinhala language. (#2788) * adding Sinhala language package, stop words, examples and lex_attrs. * Adding contributor agreement * Updating contributor agreement * Also include lowercase norm exceptions * Fix error (#2802) * Fix error ValueError: cannot resize an array that references or is referenced by another array in this way. Use the resize function * added spaCy Contributor Agreement * Add charlax's contributor agreement (#2805) * agreement of contributor, may I introduce a tiny pl languge contribution (#2799) * Contributors agreement * Contributors agreement * Contributors agreement * Add jupyter=True to displacy.render in documentation (#2806) * Revert "Also include lowercase norm exceptions" This reverts commit 70f4e8adf37cfcfab60be2b97d6deae949b30e9e. * Remove deprecated encoding argument to msgpack * Set up dependency tree pattern matching skeleton (#2732) * Fix bug when too many entity types. Fixes #2800 * Fix Python 2 test failure * Require older msgpack-numpy * Restore encoding arg on msgpack-numpy * Try to fix version pin for msgpack-numpy * Update Portuguese Language (#2790) * Add words to portuguese language _num_words * Add words to portuguese language _num_words * Portuguese - Add/remove stopwords, fix tokenizer, add currency symbols * Extended punctuation and norm_exceptions in the Portuguese language * Correct error in spacy universe docs concerning spacy-lookup (#2814) * Update Keras Example for (Parikh et al, 2016) implementation (#2803) * bug fixes in keras example * created contributor agreement * baseline for Parikh model * initial version of parikh 2016 implemented * tested asymmetric models * fixed grevious error in normalization * use standard SNLI test file * begin to rework parikh example * initial version of running example * start to document the new version * start to document the new version * Update Decompositional Attention.ipynb * fixed calls to similarity * updated the README * import sys package duh * simplified indexing on mapping word to IDs * stupid python indent error * added code from https://github.com/tensorflow/tensorflow/issues/3388 for tf bug workaround * Fix typo (closes #2815) [ci skip] * Update regex version dependency * Set version to 2.0.13.dev3 * Skip seemingly problematic test * Remove problematic test * Try previous version of regex * Revert "Remove problematic test" This reverts commit bdebbef45552d698d390aa430b527ee27830f11b. * Unskip test * Try older version of regex * 💫 Update training examples and use minibatching (#2830) <!--- Provide a general summary of your changes in the title. --> ## Description Update the training examples in `/examples/training` to show usage of spaCy's `minibatch` and `compounding` helpers ([see here](https://spacy.io/usage/training#tips-batch-size) for details). The lack of batching in the examples has caused some confusion in the past, especially for beginners who would copy-paste the examples, update them with large training sets and experienced slow and unsatisfying results. ### Types of change enhancements ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [x] My changes don't require a change to the documentation, or if they do, I've added all required information. * Visual C++ link updated (#2842) (closes #2841) [ci skip] * New landing page * Add contribution agreement * Correcting lang/ru/examples.py (#2845) * Correct some grammatical inaccuracies in lang\ru\examples.py; filled Contributor Agreement * Correct some grammatical inaccuracies in lang\ru\examples.py * Move contributor agreement to separate file * Set version to 2.0.13.dev4 * Add Persian(Farsi) language support (#2797) * Also include lowercase norm exceptions * Remove in favour of https://github.com/explosion/spaCy/graphs/contributors * Rule-based French Lemmatizer (#2818) <!--- Provide a general summary of your changes in the title. --> ## Description <!--- Use this section to describe your changes. If your changes required testing, include information about the testing environment and the tests you ran. If your test fixes a bug reported in an issue, don't forget to include the issue number. If your PR is still a work in progress, that's totally fine – just include a note to let us know. --> Add a rule-based French Lemmatizer following the english one and the excellent PR for [greek language optimizations](https://github.com/explosion/spaCy/pull/2558) to adapt the Lemmatizer class. ### Types of change <!-- What type of change does your PR cover? Is it a bug fix, an enhancement or new feature, or a change to the documentation? --> - Lemma dictionary used can be found [here](http://infolingu.univ-mlv.fr/DonneesLinguistiques/Dictionnaires/telechargement.html), I used the XML version. - Add several files containing exhaustive list of words for each part of speech - Add some lemma rules - Add POS that are not checked in the standard Lemmatizer, i.e PRON, DET, ADV and AUX - Modify the Lemmatizer class to check in lookup table as a last resort if POS not mentionned - Modify the lemmatize function to check in lookup table as a last resort - Init files are updated so the model can support all the functionalities mentioned above - Add words to tokenizer_exceptions_list.py in respect to regex used in tokenizer_exceptions.py ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [X] I have submitted the spaCy Contributor Agreement. - [X] I ran the tests, and all new and existing tests passed. - [X] My changes don't require a change to the documentation, or if they do, I've added all required information. * Set version to 2.0.13 * Fix formatting and consistency * Update docs for new version [ci skip] * Increment version [ci skip] * Add info on wheels [ci skip] * Adding "This is a sentence" example to Sinhala (#2846) * Add wheels badge * Update badge [ci skip] * Update README.rst [ci skip] * Update murmurhash pin * Increment version to 2.0.14.dev0 * Update GPU docs for v2.0.14 * Add wheel to setup_requires * Import prefer_gpu and require_gpu functions from Thinc * Add tests for prefer_gpu() and require_gpu() * Update requirements and setup.py * Workaround bug in thinc require_gpu * Set version to v2.0.14 * Update push-tag script * Unhack prefer_gpu * Require thinc 6.10.6 * Update prefer_gpu and require_gpu docs [ci skip] * Fix specifiers for GPU * Set version to 2.0.14.dev1 * Set version to 2.0.14 * Update Thinc version pin * Increment version * Fix msgpack-numpy version pin * Increment version * Update version to 2.0.16 * Update version [ci skip] * Redundant ')' in the Stop words' example (#2856) <!--- Provide a general summary of your changes in the title. --> ## Description <!--- Use this section to describe your changes. If your changes required testing, include information about the testing environment and the tests you ran. If your test fixes a bug reported in an issue, don't forget to include the issue number. If your PR is still a work in progress, that's totally fine – just include a note to let us know. --> ### Types of change <!-- What type of change does your PR cover? Is it a bug fix, an enhancement or new feature, or a change to the documentation? --> ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [ ] I have submitted the spaCy Contributor Agreement. - [ ] I ran the tests, and all new and existing tests passed. - [ ] My changes don't require a change to the documentation, or if they do, I've added all required information. * Documentation improvement regarding joblib and SO (#2867) Some documentation improvements ## Description 1. Fixed the dead URL to joblib 2. Fixed Stack Overflow brand name (with space) ### Types of change Documentation ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [x] My changes don't require a change to the documentation, or if they do, I've added all required information. * raise error when setting overlapping entities as doc.ents (#2880) * Fix out-of-bounds access in NER training The helper method state.B(1) gets the index of the first token of the buffer, or -1 if no such token exists. Normally this is safe because we pass this to functions like state.safe_get(), which returns an empty token. Here we used it directly as an array index, which is not okay! This error may have been the cause of out-of-bounds access errors during training. Similar errors may still be around, so much be hunted down. Hunting this one down took a long time...I printed out values across training runs and diffed, looking for points of divergence between runs, when no randomness should be allowed. * Change PyThaiNLP Url (#2876) * Fix missing comma * Add example showing a fix-up rule for space entities * Set version to 2.0.17.dev0 * Update regex version * Revert "Update regex version" This reverts commit 62358dd867d15bc6a475942dff34effba69dd70a. * Try setting older regex version, to align with conda * Set version to 2.0.17 * Add spacy-js to universe [ci-skip] * Add spacy-raspberry to universe (closes #2889) * Add script to validate universe json [ci skip] * Removed space in docs + added contributor indo (#2909) * - removed unneeded space in documentation * - added contributor info * Allow input text of length up to max_length, inclusive (#2922) * Include universe spec for spacy-wordnet component (#2919) * feat: include universe spec for spacy-wordnet component * chore: include spaCy contributor agreement * Minor formatting changes [ci skip] * Fix image [ci skip] Twitter URL doesn't work on live site * Check if the word is in one of the regular lists specific to each POS (#2886) * 💫 Create random IDs for SVGs to prevent ID clashes (#2927) Resolves #2924. ## Description Fixes problem where multiple visualizations in Jupyter notebooks would have clashing arc IDs, resulting in weirdly positioned arc labels. Generating a random ID prefix so even identical parses won't receive the same IDs for consistency (even if effect of ID clash isn't noticable here.) ### Types of change bug fix ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [x] My changes don't require a change to the documentation, or if they do, I've added all required information. * Fix typo [ci skip] * fixes symbolic link on py3 and windows (#2949) * fixes symbolic link on py3 and windows during setup of spacy using command python -m spacy link en_core_web_sm en closes #2948 * Update spacy/compat.py Co-Authored-By: cicorias <cicorias@users.noreply.github.com> * Fix formatting * Update universe [ci skip] * Catalan Language Support (#2940) * Catalan language Support * Ddding Catalan to documentation * Sort languages alphabetically [ci skip] * Update tests for pytest 4.x (#2965) <!--- Provide a general summary of your changes in the title. --> ## Description - [x] Replace marks in params for pytest 4.0 compat ([see here](https://docs.pytest.org/en/latest/deprecations.html#marks-in-pytest-mark-parametrize)) - [x] Un-xfail passing tests (some fixes in a recent update resolved a bunch of issues, but tests were apparently never updated here) ### Types of change <!-- What type of change does your PR cover? Is it a bug fix, an enhancement or new feature, or a change to the documentation? --> ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [x] My changes don't require a change to the documentation, or if they do, I've added all required information. * Fix regex pin to harmonize with conda (#2964) * Update README.rst * Fix bug where Vocab.prune_vector did not use 'batch_size' (#2977) Fixes #2976 * Fix typo * Fix typo * Remove duplicate file * Require thinc 7.0.0.dev2 Fixes bug in gpu_ops that would use cupy instead of numpy on CPU * Add missing import * Fix error IDs * Fix tests
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from spacy import prefer_gpu, require_gpu
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from spacy.ml._precomputable_affine import PrecomputableAffine
from spacy.ml._precomputable_affine import _backprop_precomputable_affine_padding
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@pytest.fixture
def is_admin():
"""Determine if the tests are run as admin or not."""
try:
admin = os.getuid() == 0
except AttributeError:
admin = ctypes.windll.shell32.IsUserAnAdmin() != 0
return admin
@pytest.mark.parametrize("text", ["hello/world", "hello world"])
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def test_util_ensure_path_succeeds(text):
path = util.ensure_path(text)
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assert isinstance(path, Path)
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@pytest.mark.parametrize(
"package,result", [("numpy", True), ("sfkodskfosdkfpsdpofkspdof", False)]
)
def test_util_is_package(package, result):
"""Test that an installed package via pip is recognised by util.is_package."""
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assert util.is_package(package) is result
@pytest.mark.parametrize("package", ["thinc"])
def test_util_get_package_path(package):
"""Test that a Path object is returned for a package name."""
path = util.get_package_path(package)
assert isinstance(path, Path)
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def test_PrecomputableAffine(nO=4, nI=5, nF=3, nP=2):
Adapt parser and NER for transformers (#5449) * Draft layer for BILUO actions * Fixes to biluo layer * WIP on BILUO layer * Add tests for BILUO layer * Format * Fix transitions * Update test * Link in the simple_ner * Update BILUO tagger * Update __init__ * Import simple_ner * Update test * Import * Add files * Add config * Fix label passing for BILUO and tagger * Fix label handling for simple_ner component * Update simple NER test * Update config * Hack train script * Update BILUO layer * Fix SimpleNER component * Update train_from_config * Add biluo_to_iob helper * Add IOB layer * Add IOBTagger model * Update biluo layer * Update SimpleNER tagger * Update BILUO * Read random seed in train-from-config * Update use of normal_init * Fix normalization of gradient in SimpleNER * Update IOBTagger * Remove print * Tweak masking in BILUO * Add dropout in SimpleNER * Update thinc * Tidy up simple_ner * Fix biluo model * Unhack train-from-config * Update setup.cfg and requirements * Add tb_framework.py for parser model * Try to avoid memory leak in BILUO * Move ParserModel into spacy.ml, avoid need for subclass. * Use updated parser model * Remove incorrect call to model.initializre in PrecomputableAffine * Update parser model * Avoid divide by zero in tagger * Add extra dropout layer in tagger * Refine minibatch_by_words function to avoid oom * Fix parser model after refactor * Try to avoid div-by-zero in SimpleNER * Fix infinite loop in minibatch_by_words * Use SequenceCategoricalCrossentropy in Tagger * Fix parser model when hidden layer * Remove extra dropout from tagger * Add extra nan check in tagger * Fix thinc version * Update tests and imports * Fix test * Update test * Update tests * Fix tests * Fix test Co-authored-by: Ines Montani <ines@ines.io>
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model = PrecomputableAffine(nO=nO, nI=nI, nF=nF, nP=nP).initialize()
Update spaCy for thinc 8.0.0 (#4920) * Add load_from_config function * Add train_from_config script * Merge configs and expose via spacy.config * Fix script * Suggest create_evaluation_callback * Hard-code for NER * Fix errors * Register command * Add TODO * Update train-from-config todos * Fix imports * Allow delayed setting of parser model nr_class * Get train-from-config working * Tidy up and fix scores and printing * Hide traceback if cancelled * Fix weighted score formatting * Fix score formatting * Make output_path optional * Add Tok2Vec component * Tidy up and add tok2vec_tensors * Add option to copy docs in nlp.update * Copy docs in nlp.update * Adjust nlp.update() for set_annotations * Don't shuffle pipes in nlp.update, decruft * Support set_annotations arg in component update * Support set_annotations in parser update * Add get_gradients method * Add get_gradients to parser * Update errors.py * Fix problems caused by merge * Add _link_components method in nlp * Add concept of 'listeners' and ControlledModel * Support optional attributes arg in ControlledModel * Try having tok2vec component in pipeline * Fix tok2vec component * Fix config * Fix tok2vec * Update for Example * Update for Example * Update config * Add eg2doc util * Update and add schemas/types * Update schemas * Fix nlp.update * Fix tagger * Remove hacks from train-from-config * Remove hard-coded config str * Calculate loss in tok2vec component * Tidy up and use function signatures instead of models * Support union types for registry models * Minor cleaning in Language.update * Make ControlledModel specifically Tok2VecListener * Fix train_from_config * Fix tok2vec * Tidy up * Add function for bilstm tok2vec * Fix type * Fix syntax * Fix pytorch optimizer * Add example configs * Update for thinc describe changes * Update for Thinc changes * Update for dropout/sgd changes * Update for dropout/sgd changes * Unhack gradient update * Work on refactoring _ml * Remove _ml.py module * WIP upgrade cli scripts for thinc * Move some _ml stuff to util * Import link_vectors from util * Update train_from_config * Import from util * Import from util * Temporarily add ml.component_models module * Move ml methods * Move typedefs * Update load vectors * Update gitignore * Move imports * Add PrecomputableAffine * Fix imports * Fix imports * Fix imports * Fix missing imports * Update CLI scripts * Update spacy.language * Add stubs for building the models * Update model definition * Update create_default_optimizer * Fix import * Fix comment * Update imports in tests * Update imports in spacy.cli * Fix import * fix obsolete thinc imports * update srsly pin * from thinc to ml_datasets for example data such as imdb * update ml_datasets pin * using STATE.vectors * small fix * fix Sentencizer.pipe * black formatting * rename Affine to Linear as in thinc * set validate explicitely to True * rename with_square_sequences to with_list2padded * rename with_flatten to with_list2array * chaining layernorm * small fixes * revert Optimizer import * build_nel_encoder with new thinc style * fixes using model's get and set methods * Tok2Vec in component models, various fixes * fix up legacy tok2vec code * add model initialize calls * add in build_tagger_model * small fixes * setting model dims * fixes for ParserModel * various small fixes * initialize thinc Models * fixes * consistent naming of window_size * fixes, removing set_dropout * work around Iterable issue * remove legacy tok2vec * util fix * fix forward function of tok2vec listener * more fixes * trying to fix PrecomputableAffine (not succesful yet) * alloc instead of allocate * add morphologizer * rename residual * rename fixes * Fix predict function * Update parser and parser model * fixing few more tests * Fix precomputable affine * Update component model * Update parser model * Move backprop padding to own function, for test * Update test * Fix p. affine * Update NEL * build_bow_text_classifier and extract_ngrams * Fix parser init * Fix test add label * add build_simple_cnn_text_classifier * Fix parser init * Set gpu off by default in example * Fix tok2vec listener * Fix parser model * Small fixes * small fix for PyTorchLSTM parameters * revert my_compounding hack (iterable fixed now) * fix biLSTM * Fix uniqued * PyTorchRNNWrapper fix * small fixes * use helper function to calculate cosine loss * small fixes for build_simple_cnn_text_classifier * putting dropout default at 0.0 to ensure the layer gets built * using thinc util's set_dropout_rate * moving layer normalization inside of maxout definition to optimize dropout * temp debugging in NEL * fixed NEL model by using init defaults ! * fixing after set_dropout_rate refactor * proper fix * fix test_update_doc after refactoring optimizers in thinc * Add CharacterEmbed layer * Construct tagger Model * Add missing import * Remove unused stuff * Work on textcat * fix test (again :)) after optimizer refactor * fixes to allow reading Tagger from_disk without overwriting dimensions * don't build the tok2vec prematuraly * fix CharachterEmbed init * CharacterEmbed fixes * Fix CharacterEmbed architecture * fix imports * renames from latest thinc update * one more rename * add initialize calls where appropriate * fix parser initialization * Update Thinc version * Fix errors, auto-format and tidy up imports * Fix validation * fix if bias is cupy array * revert for now * ensure it's a numpy array before running bp in ParserStepModel * no reason to call require_gpu twice * use CupyOps.to_numpy instead of cupy directly * fix initialize of ParserModel * remove unnecessary import * fixes for CosineDistance * fix device renaming * use refactored loss functions (Thinc PR 251) * overfitting test for tagger * experimental settings for the tagger: avoid zero-init and subword normalization * clean up tagger overfitting test * use previous default value for nP * remove toy config * bringing layernorm back (had a bug - fixed in thinc) * revert setting nP explicitly * remove setting default in constructor * restore values as they used to be * add overfitting test for NER * add overfitting test for dep parser * add overfitting test for textcat * fixing init for linear (previously affine) * larger eps window for textcat * ensure doc is not None * Require newer thinc * Make float check vaguer * Slop the textcat overfit test more * Fix textcat test * Fix exclusive classes for textcat * fix after renaming of alloc methods * fixing renames and mandatory arguments (staticvectors WIP) * upgrade to thinc==8.0.0.dev3 * refer to vocab.vectors directly instead of its name * rename alpha to learn_rate * adding hashembed and staticvectors dropout * upgrade to thinc 8.0.0.dev4 * add name back to avoid warning W020 * thinc dev4 * update srsly * using thinc 8.0.0a0 ! Co-authored-by: Matthew Honnibal <honnibal+gh@gmail.com> Co-authored-by: Ines Montani <ines@ines.io>
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assert model.get_param("W").shape == (nF, nO, nP, nI)
tensor = model.ops.alloc((10, nI))
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Y, get_dX = model.begin_update(tensor)
assert Y.shape == (tensor.shape[0] + 1, nF, nO, nP)
Update spaCy for thinc 8.0.0 (#4920) * Add load_from_config function * Add train_from_config script * Merge configs and expose via spacy.config * Fix script * Suggest create_evaluation_callback * Hard-code for NER * Fix errors * Register command * Add TODO * Update train-from-config todos * Fix imports * Allow delayed setting of parser model nr_class * Get train-from-config working * Tidy up and fix scores and printing * Hide traceback if cancelled * Fix weighted score formatting * Fix score formatting * Make output_path optional * Add Tok2Vec component * Tidy up and add tok2vec_tensors * Add option to copy docs in nlp.update * Copy docs in nlp.update * Adjust nlp.update() for set_annotations * Don't shuffle pipes in nlp.update, decruft * Support set_annotations arg in component update * Support set_annotations in parser update * Add get_gradients method * Add get_gradients to parser * Update errors.py * Fix problems caused by merge * Add _link_components method in nlp * Add concept of 'listeners' and ControlledModel * Support optional attributes arg in ControlledModel * Try having tok2vec component in pipeline * Fix tok2vec component * Fix config * Fix tok2vec * Update for Example * Update for Example * Update config * Add eg2doc util * Update and add schemas/types * Update schemas * Fix nlp.update * Fix tagger * Remove hacks from train-from-config * Remove hard-coded config str * Calculate loss in tok2vec component * Tidy up and use function signatures instead of models * Support union types for registry models * Minor cleaning in Language.update * Make ControlledModel specifically Tok2VecListener * Fix train_from_config * Fix tok2vec * Tidy up * Add function for bilstm tok2vec * Fix type * Fix syntax * Fix pytorch optimizer * Add example configs * Update for thinc describe changes * Update for Thinc changes * Update for dropout/sgd changes * Update for dropout/sgd changes * Unhack gradient update * Work on refactoring _ml * Remove _ml.py module * WIP upgrade cli scripts for thinc * Move some _ml stuff to util * Import link_vectors from util * Update train_from_config * Import from util * Import from util * Temporarily add ml.component_models module * Move ml methods * Move typedefs * Update load vectors * Update gitignore * Move imports * Add PrecomputableAffine * Fix imports * Fix imports * Fix imports * Fix missing imports * Update CLI scripts * Update spacy.language * Add stubs for building the models * Update model definition * Update create_default_optimizer * Fix import * Fix comment * Update imports in tests * Update imports in spacy.cli * Fix import * fix obsolete thinc imports * update srsly pin * from thinc to ml_datasets for example data such as imdb * update ml_datasets pin * using STATE.vectors * small fix * fix Sentencizer.pipe * black formatting * rename Affine to Linear as in thinc * set validate explicitely to True * rename with_square_sequences to with_list2padded * rename with_flatten to with_list2array * chaining layernorm * small fixes * revert Optimizer import * build_nel_encoder with new thinc style * fixes using model's get and set methods * Tok2Vec in component models, various fixes * fix up legacy tok2vec code * add model initialize calls * add in build_tagger_model * small fixes * setting model dims * fixes for ParserModel * various small fixes * initialize thinc Models * fixes * consistent naming of window_size * fixes, removing set_dropout * work around Iterable issue * remove legacy tok2vec * util fix * fix forward function of tok2vec listener * more fixes * trying to fix PrecomputableAffine (not succesful yet) * alloc instead of allocate * add morphologizer * rename residual * rename fixes * Fix predict function * Update parser and parser model * fixing few more tests * Fix precomputable affine * Update component model * Update parser model * Move backprop padding to own function, for test * Update test * Fix p. affine * Update NEL * build_bow_text_classifier and extract_ngrams * Fix parser init * Fix test add label * add build_simple_cnn_text_classifier * Fix parser init * Set gpu off by default in example * Fix tok2vec listener * Fix parser model * Small fixes * small fix for PyTorchLSTM parameters * revert my_compounding hack (iterable fixed now) * fix biLSTM * Fix uniqued * PyTorchRNNWrapper fix * small fixes * use helper function to calculate cosine loss * small fixes for build_simple_cnn_text_classifier * putting dropout default at 0.0 to ensure the layer gets built * using thinc util's set_dropout_rate * moving layer normalization inside of maxout definition to optimize dropout * temp debugging in NEL * fixed NEL model by using init defaults ! * fixing after set_dropout_rate refactor * proper fix * fix test_update_doc after refactoring optimizers in thinc * Add CharacterEmbed layer * Construct tagger Model * Add missing import * Remove unused stuff * Work on textcat * fix test (again :)) after optimizer refactor * fixes to allow reading Tagger from_disk without overwriting dimensions * don't build the tok2vec prematuraly * fix CharachterEmbed init * CharacterEmbed fixes * Fix CharacterEmbed architecture * fix imports * renames from latest thinc update * one more rename * add initialize calls where appropriate * fix parser initialization * Update Thinc version * Fix errors, auto-format and tidy up imports * Fix validation * fix if bias is cupy array * revert for now * ensure it's a numpy array before running bp in ParserStepModel * no reason to call require_gpu twice * use CupyOps.to_numpy instead of cupy directly * fix initialize of ParserModel * remove unnecessary import * fixes for CosineDistance * fix device renaming * use refactored loss functions (Thinc PR 251) * overfitting test for tagger * experimental settings for the tagger: avoid zero-init and subword normalization * clean up tagger overfitting test * use previous default value for nP * remove toy config * bringing layernorm back (had a bug - fixed in thinc) * revert setting nP explicitly * remove setting default in constructor * restore values as they used to be * add overfitting test for NER * add overfitting test for dep parser * add overfitting test for textcat * fixing init for linear (previously affine) * larger eps window for textcat * ensure doc is not None * Require newer thinc * Make float check vaguer * Slop the textcat overfit test more * Fix textcat test * Fix exclusive classes for textcat * fix after renaming of alloc methods * fixing renames and mandatory arguments (staticvectors WIP) * upgrade to thinc==8.0.0.dev3 * refer to vocab.vectors directly instead of its name * rename alpha to learn_rate * adding hashembed and staticvectors dropout * upgrade to thinc 8.0.0.dev4 * add name back to avoid warning W020 * thinc dev4 * update srsly * using thinc 8.0.0a0 ! Co-authored-by: Matthew Honnibal <honnibal+gh@gmail.com> Co-authored-by: Ines Montani <ines@ines.io>
2020-01-29 19:06:46 +03:00
dY = model.ops.alloc((15, nO, nP))
ids = model.ops.alloc((15, nF))
ids[1, 2] = -1
2017-11-03 16:04:16 +03:00
dY[1] = 1
Update spaCy for thinc 8.0.0 (#4920) * Add load_from_config function * Add train_from_config script * Merge configs and expose via spacy.config * Fix script * Suggest create_evaluation_callback * Hard-code for NER * Fix errors * Register command * Add TODO * Update train-from-config todos * Fix imports * Allow delayed setting of parser model nr_class * Get train-from-config working * Tidy up and fix scores and printing * Hide traceback if cancelled * Fix weighted score formatting * Fix score formatting * Make output_path optional * Add Tok2Vec component * Tidy up and add tok2vec_tensors * Add option to copy docs in nlp.update * Copy docs in nlp.update * Adjust nlp.update() for set_annotations * Don't shuffle pipes in nlp.update, decruft * Support set_annotations arg in component update * Support set_annotations in parser update * Add get_gradients method * Add get_gradients to parser * Update errors.py * Fix problems caused by merge * Add _link_components method in nlp * Add concept of 'listeners' and ControlledModel * Support optional attributes arg in ControlledModel * Try having tok2vec component in pipeline * Fix tok2vec component * Fix config * Fix tok2vec * Update for Example * Update for Example * Update config * Add eg2doc util * Update and add schemas/types * Update schemas * Fix nlp.update * Fix tagger * Remove hacks from train-from-config * Remove hard-coded config str * Calculate loss in tok2vec component * Tidy up and use function signatures instead of models * Support union types for registry models * Minor cleaning in Language.update * Make ControlledModel specifically Tok2VecListener * Fix train_from_config * Fix tok2vec * Tidy up * Add function for bilstm tok2vec * Fix type * Fix syntax * Fix pytorch optimizer * Add example configs * Update for thinc describe changes * Update for Thinc changes * Update for dropout/sgd changes * Update for dropout/sgd changes * Unhack gradient update * Work on refactoring _ml * Remove _ml.py module * WIP upgrade cli scripts for thinc * Move some _ml stuff to util * Import link_vectors from util * Update train_from_config * Import from util * Import from util * Temporarily add ml.component_models module * Move ml methods * Move typedefs * Update load vectors * Update gitignore * Move imports * Add PrecomputableAffine * Fix imports * Fix imports * Fix imports * Fix missing imports * Update CLI scripts * Update spacy.language * Add stubs for building the models * Update model definition * Update create_default_optimizer * Fix import * Fix comment * Update imports in tests * Update imports in spacy.cli * Fix import * fix obsolete thinc imports * update srsly pin * from thinc to ml_datasets for example data such as imdb * update ml_datasets pin * using STATE.vectors * small fix * fix Sentencizer.pipe * black formatting * rename Affine to Linear as in thinc * set validate explicitely to True * rename with_square_sequences to with_list2padded * rename with_flatten to with_list2array * chaining layernorm * small fixes * revert Optimizer import * build_nel_encoder with new thinc style * fixes using model's get and set methods * Tok2Vec in component models, various fixes * fix up legacy tok2vec code * add model initialize calls * add in build_tagger_model * small fixes * setting model dims * fixes for ParserModel * various small fixes * initialize thinc Models * fixes * consistent naming of window_size * fixes, removing set_dropout * work around Iterable issue * remove legacy tok2vec * util fix * fix forward function of tok2vec listener * more fixes * trying to fix PrecomputableAffine (not succesful yet) * alloc instead of allocate * add morphologizer * rename residual * rename fixes * Fix predict function * Update parser and parser model * fixing few more tests * Fix precomputable affine * Update component model * Update parser model * Move backprop padding to own function, for test * Update test * Fix p. affine * Update NEL * build_bow_text_classifier and extract_ngrams * Fix parser init * Fix test add label * add build_simple_cnn_text_classifier * Fix parser init * Set gpu off by default in example * Fix tok2vec listener * Fix parser model * Small fixes * small fix for PyTorchLSTM parameters * revert my_compounding hack (iterable fixed now) * fix biLSTM * Fix uniqued * PyTorchRNNWrapper fix * small fixes * use helper function to calculate cosine loss * small fixes for build_simple_cnn_text_classifier * putting dropout default at 0.0 to ensure the layer gets built * using thinc util's set_dropout_rate * moving layer normalization inside of maxout definition to optimize dropout * temp debugging in NEL * fixed NEL model by using init defaults ! * fixing after set_dropout_rate refactor * proper fix * fix test_update_doc after refactoring optimizers in thinc * Add CharacterEmbed layer * Construct tagger Model * Add missing import * Remove unused stuff * Work on textcat * fix test (again :)) after optimizer refactor * fixes to allow reading Tagger from_disk without overwriting dimensions * don't build the tok2vec prematuraly * fix CharachterEmbed init * CharacterEmbed fixes * Fix CharacterEmbed architecture * fix imports * renames from latest thinc update * one more rename * add initialize calls where appropriate * fix parser initialization * Update Thinc version * Fix errors, auto-format and tidy up imports * Fix validation * fix if bias is cupy array * revert for now * ensure it's a numpy array before running bp in ParserStepModel * no reason to call require_gpu twice * use CupyOps.to_numpy instead of cupy directly * fix initialize of ParserModel * remove unnecessary import * fixes for CosineDistance * fix device renaming * use refactored loss functions (Thinc PR 251) * overfitting test for tagger * experimental settings for the tagger: avoid zero-init and subword normalization * clean up tagger overfitting test * use previous default value for nP * remove toy config * bringing layernorm back (had a bug - fixed in thinc) * revert setting nP explicitly * remove setting default in constructor * restore values as they used to be * add overfitting test for NER * add overfitting test for dep parser * add overfitting test for textcat * fixing init for linear (previously affine) * larger eps window for textcat * ensure doc is not None * Require newer thinc * Make float check vaguer * Slop the textcat overfit test more * Fix textcat test * Fix exclusive classes for textcat * fix after renaming of alloc methods * fixing renames and mandatory arguments (staticvectors WIP) * upgrade to thinc==8.0.0.dev3 * refer to vocab.vectors directly instead of its name * rename alpha to learn_rate * adding hashembed and staticvectors dropout * upgrade to thinc 8.0.0.dev4 * add name back to avoid warning W020 * thinc dev4 * update srsly * using thinc 8.0.0a0 ! Co-authored-by: Matthew Honnibal <honnibal+gh@gmail.com> Co-authored-by: Ines Montani <ines@ines.io>
2020-01-29 19:06:46 +03:00
assert not model.has_grad("pad")
d_pad = _backprop_precomputable_affine_padding(model, dY, ids)
assert d_pad[0, 2, 0, 0] == 1.0
ids.fill(0.0)
dY.fill(0.0)
Update spaCy for thinc 8.0.0 (#4920) * Add load_from_config function * Add train_from_config script * Merge configs and expose via spacy.config * Fix script * Suggest create_evaluation_callback * Hard-code for NER * Fix errors * Register command * Add TODO * Update train-from-config todos * Fix imports * Allow delayed setting of parser model nr_class * Get train-from-config working * Tidy up and fix scores and printing * Hide traceback if cancelled * Fix weighted score formatting * Fix score formatting * Make output_path optional * Add Tok2Vec component * Tidy up and add tok2vec_tensors * Add option to copy docs in nlp.update * Copy docs in nlp.update * Adjust nlp.update() for set_annotations * Don't shuffle pipes in nlp.update, decruft * Support set_annotations arg in component update * Support set_annotations in parser update * Add get_gradients method * Add get_gradients to parser * Update errors.py * Fix problems caused by merge * Add _link_components method in nlp * Add concept of 'listeners' and ControlledModel * Support optional attributes arg in ControlledModel * Try having tok2vec component in pipeline * Fix tok2vec component * Fix config * Fix tok2vec * Update for Example * Update for Example * Update config * Add eg2doc util * Update and add schemas/types * Update schemas * Fix nlp.update * Fix tagger * Remove hacks from train-from-config * Remove hard-coded config str * Calculate loss in tok2vec component * Tidy up and use function signatures instead of models * Support union types for registry models * Minor cleaning in Language.update * Make ControlledModel specifically Tok2VecListener * Fix train_from_config * Fix tok2vec * Tidy up * Add function for bilstm tok2vec * Fix type * Fix syntax * Fix pytorch optimizer * Add example configs * Update for thinc describe changes * Update for Thinc changes * Update for dropout/sgd changes * Update for dropout/sgd changes * Unhack gradient update * Work on refactoring _ml * Remove _ml.py module * WIP upgrade cli scripts for thinc * Move some _ml stuff to util * Import link_vectors from util * Update train_from_config * Import from util * Import from util * Temporarily add ml.component_models module * Move ml methods * Move typedefs * Update load vectors * Update gitignore * Move imports * Add PrecomputableAffine * Fix imports * Fix imports * Fix imports * Fix missing imports * Update CLI scripts * Update spacy.language * Add stubs for building the models * Update model definition * Update create_default_optimizer * Fix import * Fix comment * Update imports in tests * Update imports in spacy.cli * Fix import * fix obsolete thinc imports * update srsly pin * from thinc to ml_datasets for example data such as imdb * update ml_datasets pin * using STATE.vectors * small fix * fix Sentencizer.pipe * black formatting * rename Affine to Linear as in thinc * set validate explicitely to True * rename with_square_sequences to with_list2padded * rename with_flatten to with_list2array * chaining layernorm * small fixes * revert Optimizer import * build_nel_encoder with new thinc style * fixes using model's get and set methods * Tok2Vec in component models, various fixes * fix up legacy tok2vec code * add model initialize calls * add in build_tagger_model * small fixes * setting model dims * fixes for ParserModel * various small fixes * initialize thinc Models * fixes * consistent naming of window_size * fixes, removing set_dropout * work around Iterable issue * remove legacy tok2vec * util fix * fix forward function of tok2vec listener * more fixes * trying to fix PrecomputableAffine (not succesful yet) * alloc instead of allocate * add morphologizer * rename residual * rename fixes * Fix predict function * Update parser and parser model * fixing few more tests * Fix precomputable affine * Update component model * Update parser model * Move backprop padding to own function, for test * Update test * Fix p. affine * Update NEL * build_bow_text_classifier and extract_ngrams * Fix parser init * Fix test add label * add build_simple_cnn_text_classifier * Fix parser init * Set gpu off by default in example * Fix tok2vec listener * Fix parser model * Small fixes * small fix for PyTorchLSTM parameters * revert my_compounding hack (iterable fixed now) * fix biLSTM * Fix uniqued * PyTorchRNNWrapper fix * small fixes * use helper function to calculate cosine loss * small fixes for build_simple_cnn_text_classifier * putting dropout default at 0.0 to ensure the layer gets built * using thinc util's set_dropout_rate * moving layer normalization inside of maxout definition to optimize dropout * temp debugging in NEL * fixed NEL model by using init defaults ! * fixing after set_dropout_rate refactor * proper fix * fix test_update_doc after refactoring optimizers in thinc * Add CharacterEmbed layer * Construct tagger Model * Add missing import * Remove unused stuff * Work on textcat * fix test (again :)) after optimizer refactor * fixes to allow reading Tagger from_disk without overwriting dimensions * don't build the tok2vec prematuraly * fix CharachterEmbed init * CharacterEmbed fixes * Fix CharacterEmbed architecture * fix imports * renames from latest thinc update * one more rename * add initialize calls where appropriate * fix parser initialization * Update Thinc version * Fix errors, auto-format and tidy up imports * Fix validation * fix if bias is cupy array * revert for now * ensure it's a numpy array before running bp in ParserStepModel * no reason to call require_gpu twice * use CupyOps.to_numpy instead of cupy directly * fix initialize of ParserModel * remove unnecessary import * fixes for CosineDistance * fix device renaming * use refactored loss functions (Thinc PR 251) * overfitting test for tagger * experimental settings for the tagger: avoid zero-init and subword normalization * clean up tagger overfitting test * use previous default value for nP * remove toy config * bringing layernorm back (had a bug - fixed in thinc) * revert setting nP explicitly * remove setting default in constructor * restore values as they used to be * add overfitting test for NER * add overfitting test for dep parser * add overfitting test for textcat * fixing init for linear (previously affine) * larger eps window for textcat * ensure doc is not None * Require newer thinc * Make float check vaguer * Slop the textcat overfit test more * Fix textcat test * Fix exclusive classes for textcat * fix after renaming of alloc methods * fixing renames and mandatory arguments (staticvectors WIP) * upgrade to thinc==8.0.0.dev3 * refer to vocab.vectors directly instead of its name * rename alpha to learn_rate * adding hashembed and staticvectors dropout * upgrade to thinc 8.0.0.dev4 * add name back to avoid warning W020 * thinc dev4 * update srsly * using thinc 8.0.0a0 ! Co-authored-by: Matthew Honnibal <honnibal+gh@gmail.com> Co-authored-by: Ines Montani <ines@ines.io>
2020-01-29 19:06:46 +03:00
dY[0] = 0
ids[1, 2] = 0
ids[1, 1] = -1
ids[1, 0] = -1
2017-11-03 16:04:16 +03:00
dY[1] = 1
Update spaCy for thinc 8.0.0 (#4920) * Add load_from_config function * Add train_from_config script * Merge configs and expose via spacy.config * Fix script * Suggest create_evaluation_callback * Hard-code for NER * Fix errors * Register command * Add TODO * Update train-from-config todos * Fix imports * Allow delayed setting of parser model nr_class * Get train-from-config working * Tidy up and fix scores and printing * Hide traceback if cancelled * Fix weighted score formatting * Fix score formatting * Make output_path optional * Add Tok2Vec component * Tidy up and add tok2vec_tensors * Add option to copy docs in nlp.update * Copy docs in nlp.update * Adjust nlp.update() for set_annotations * Don't shuffle pipes in nlp.update, decruft * Support set_annotations arg in component update * Support set_annotations in parser update * Add get_gradients method * Add get_gradients to parser * Update errors.py * Fix problems caused by merge * Add _link_components method in nlp * Add concept of 'listeners' and ControlledModel * Support optional attributes arg in ControlledModel * Try having tok2vec component in pipeline * Fix tok2vec component * Fix config * Fix tok2vec * Update for Example * Update for Example * Update config * Add eg2doc util * Update and add schemas/types * Update schemas * Fix nlp.update * Fix tagger * Remove hacks from train-from-config * Remove hard-coded config str * Calculate loss in tok2vec component * Tidy up and use function signatures instead of models * Support union types for registry models * Minor cleaning in Language.update * Make ControlledModel specifically Tok2VecListener * Fix train_from_config * Fix tok2vec * Tidy up * Add function for bilstm tok2vec * Fix type * Fix syntax * Fix pytorch optimizer * Add example configs * Update for thinc describe changes * Update for Thinc changes * Update for dropout/sgd changes * Update for dropout/sgd changes * Unhack gradient update * Work on refactoring _ml * Remove _ml.py module * WIP upgrade cli scripts for thinc * Move some _ml stuff to util * Import link_vectors from util * Update train_from_config * Import from util * Import from util * Temporarily add ml.component_models module * Move ml methods * Move typedefs * Update load vectors * Update gitignore * Move imports * Add PrecomputableAffine * Fix imports * Fix imports * Fix imports * Fix missing imports * Update CLI scripts * Update spacy.language * Add stubs for building the models * Update model definition * Update create_default_optimizer * Fix import * Fix comment * Update imports in tests * Update imports in spacy.cli * Fix import * fix obsolete thinc imports * update srsly pin * from thinc to ml_datasets for example data such as imdb * update ml_datasets pin * using STATE.vectors * small fix * fix Sentencizer.pipe * black formatting * rename Affine to Linear as in thinc * set validate explicitely to True * rename with_square_sequences to with_list2padded * rename with_flatten to with_list2array * chaining layernorm * small fixes * revert Optimizer import * build_nel_encoder with new thinc style * fixes using model's get and set methods * Tok2Vec in component models, various fixes * fix up legacy tok2vec code * add model initialize calls * add in build_tagger_model * small fixes * setting model dims * fixes for ParserModel * various small fixes * initialize thinc Models * fixes * consistent naming of window_size * fixes, removing set_dropout * work around Iterable issue * remove legacy tok2vec * util fix * fix forward function of tok2vec listener * more fixes * trying to fix PrecomputableAffine (not succesful yet) * alloc instead of allocate * add morphologizer * rename residual * rename fixes * Fix predict function * Update parser and parser model * fixing few more tests * Fix precomputable affine * Update component model * Update parser model * Move backprop padding to own function, for test * Update test * Fix p. affine * Update NEL * build_bow_text_classifier and extract_ngrams * Fix parser init * Fix test add label * add build_simple_cnn_text_classifier * Fix parser init * Set gpu off by default in example * Fix tok2vec listener * Fix parser model * Small fixes * small fix for PyTorchLSTM parameters * revert my_compounding hack (iterable fixed now) * fix biLSTM * Fix uniqued * PyTorchRNNWrapper fix * small fixes * use helper function to calculate cosine loss * small fixes for build_simple_cnn_text_classifier * putting dropout default at 0.0 to ensure the layer gets built * using thinc util's set_dropout_rate * moving layer normalization inside of maxout definition to optimize dropout * temp debugging in NEL * fixed NEL model by using init defaults ! * fixing after set_dropout_rate refactor * proper fix * fix test_update_doc after refactoring optimizers in thinc * Add CharacterEmbed layer * Construct tagger Model * Add missing import * Remove unused stuff * Work on textcat * fix test (again :)) after optimizer refactor * fixes to allow reading Tagger from_disk without overwriting dimensions * don't build the tok2vec prematuraly * fix CharachterEmbed init * CharacterEmbed fixes * Fix CharacterEmbed architecture * fix imports * renames from latest thinc update * one more rename * add initialize calls where appropriate * fix parser initialization * Update Thinc version * Fix errors, auto-format and tidy up imports * Fix validation * fix if bias is cupy array * revert for now * ensure it's a numpy array before running bp in ParserStepModel * no reason to call require_gpu twice * use CupyOps.to_numpy instead of cupy directly * fix initialize of ParserModel * remove unnecessary import * fixes for CosineDistance * fix device renaming * use refactored loss functions (Thinc PR 251) * overfitting test for tagger * experimental settings for the tagger: avoid zero-init and subword normalization * clean up tagger overfitting test * use previous default value for nP * remove toy config * bringing layernorm back (had a bug - fixed in thinc) * revert setting nP explicitly * remove setting default in constructor * restore values as they used to be * add overfitting test for NER * add overfitting test for dep parser * add overfitting test for textcat * fixing init for linear (previously affine) * larger eps window for textcat * ensure doc is not None * Require newer thinc * Make float check vaguer * Slop the textcat overfit test more * Fix textcat test * Fix exclusive classes for textcat * fix after renaming of alloc methods * fixing renames and mandatory arguments (staticvectors WIP) * upgrade to thinc==8.0.0.dev3 * refer to vocab.vectors directly instead of its name * rename alpha to learn_rate * adding hashembed and staticvectors dropout * upgrade to thinc 8.0.0.dev4 * add name back to avoid warning W020 * thinc dev4 * update srsly * using thinc 8.0.0a0 ! Co-authored-by: Matthew Honnibal <honnibal+gh@gmail.com> Co-authored-by: Ines Montani <ines@ines.io>
2020-01-29 19:06:46 +03:00
ids[2, 0] = -1
dY[2] = 5
d_pad = _backprop_precomputable_affine_padding(model, dY, ids)
assert d_pad[0, 0, 0, 0] == 6
assert d_pad[0, 1, 0, 0] == 1
assert d_pad[0, 2, 0, 0] == 0
💫 Port master changes over to develop (#2979) * Create aryaprabhudesai.md (#2681) * Update _install.jade (#2688) Typo fix: "models" -> "model" * Add FAC to spacy.explain (resolves #2706) * Remove docstrings for deprecated arguments (see #2703) * When calling getoption() in conftest.py, pass a default option (#2709) * When calling getoption() in conftest.py, pass a default option This is necessary to allow testing an installed spacy by running: pytest --pyargs spacy * Add contributor agreement * update bengali token rules for hyphen and digits (#2731) * Less norm computations in token similarity (#2730) * Less norm computations in token similarity * Contributor agreement * Remove ')' for clarity (#2737) Sorry, don't mean to be nitpicky, I just noticed this when going through the CLI and thought it was a quick fix. That said, if this was intention than please let me know. * added contributor agreement for mbkupfer (#2738) * Basic support for Telugu language (#2751) * Lex _attrs for polish language (#2750) * Signed spaCy contributor agreement * Added polish version of english lex_attrs * Introduces a bulk merge function, in order to solve issue #653 (#2696) * Fix comment * Introduce bulk merge to increase performance on many span merges * Sign contributor agreement * Implement pull request suggestions * Describe converters more explicitly (see #2643) * Add multi-threading note to Language.pipe (resolves #2582) [ci skip] * Fix formatting * Fix dependency scheme docs (closes #2705) [ci skip] * Don't set stop word in example (closes #2657) [ci skip] * Add words to portuguese language _num_words (#2759) * Add words to portuguese language _num_words * Add words to portuguese language _num_words * Update Indonesian model (#2752) * adding e-KTP in tokenizer exceptions list * add exception token * removing lines with containing space as it won't matter since we use .split() method in the end, added new tokens in exception * add tokenizer exceptions list * combining base_norms with norm_exceptions * adding norm_exception * fix double key in lemmatizer * remove unused import on punctuation.py * reformat stop_words to reduce number of lines, improve readibility * updating tokenizer exception * implement is_currency for lang/id * adding orth_first_upper in tokenizer_exceptions * update the norm_exception list * remove bunch of abbreviations * adding contributors file * Fixed spaCy+Keras example (#2763) * bug fixes in keras example * created contributor agreement * Adding French hyphenated first name (#2786) * Fix typo (closes #2784) * Fix typo (#2795) [ci skip] Fixed typo on line 6 "regcognizer --> recognizer" * Adding basic support for Sinhala language. (#2788) * adding Sinhala language package, stop words, examples and lex_attrs. * Adding contributor agreement * Updating contributor agreement * Also include lowercase norm exceptions * Fix error (#2802) * Fix error ValueError: cannot resize an array that references or is referenced by another array in this way. Use the resize function * added spaCy Contributor Agreement * Add charlax's contributor agreement (#2805) * agreement of contributor, may I introduce a tiny pl languge contribution (#2799) * Contributors agreement * Contributors agreement * Contributors agreement * Add jupyter=True to displacy.render in documentation (#2806) * Revert "Also include lowercase norm exceptions" This reverts commit 70f4e8adf37cfcfab60be2b97d6deae949b30e9e. * Remove deprecated encoding argument to msgpack * Set up dependency tree pattern matching skeleton (#2732) * Fix bug when too many entity types. Fixes #2800 * Fix Python 2 test failure * Require older msgpack-numpy * Restore encoding arg on msgpack-numpy * Try to fix version pin for msgpack-numpy * Update Portuguese Language (#2790) * Add words to portuguese language _num_words * Add words to portuguese language _num_words * Portuguese - Add/remove stopwords, fix tokenizer, add currency symbols * Extended punctuation and norm_exceptions in the Portuguese language * Correct error in spacy universe docs concerning spacy-lookup (#2814) * Update Keras Example for (Parikh et al, 2016) implementation (#2803) * bug fixes in keras example * created contributor agreement * baseline for Parikh model * initial version of parikh 2016 implemented * tested asymmetric models * fixed grevious error in normalization * use standard SNLI test file * begin to rework parikh example * initial version of running example * start to document the new version * start to document the new version * Update Decompositional Attention.ipynb * fixed calls to similarity * updated the README * import sys package duh * simplified indexing on mapping word to IDs * stupid python indent error * added code from https://github.com/tensorflow/tensorflow/issues/3388 for tf bug workaround * Fix typo (closes #2815) [ci skip] * Update regex version dependency * Set version to 2.0.13.dev3 * Skip seemingly problematic test * Remove problematic test * Try previous version of regex * Revert "Remove problematic test" This reverts commit bdebbef45552d698d390aa430b527ee27830f11b. * Unskip test * Try older version of regex * 💫 Update training examples and use minibatching (#2830) <!--- Provide a general summary of your changes in the title. --> ## Description Update the training examples in `/examples/training` to show usage of spaCy's `minibatch` and `compounding` helpers ([see here](https://spacy.io/usage/training#tips-batch-size) for details). The lack of batching in the examples has caused some confusion in the past, especially for beginners who would copy-paste the examples, update them with large training sets and experienced slow and unsatisfying results. ### Types of change enhancements ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [x] My changes don't require a change to the documentation, or if they do, I've added all required information. * Visual C++ link updated (#2842) (closes #2841) [ci skip] * New landing page * Add contribution agreement * Correcting lang/ru/examples.py (#2845) * Correct some grammatical inaccuracies in lang\ru\examples.py; filled Contributor Agreement * Correct some grammatical inaccuracies in lang\ru\examples.py * Move contributor agreement to separate file * Set version to 2.0.13.dev4 * Add Persian(Farsi) language support (#2797) * Also include lowercase norm exceptions * Remove in favour of https://github.com/explosion/spaCy/graphs/contributors * Rule-based French Lemmatizer (#2818) <!--- Provide a general summary of your changes in the title. --> ## Description <!--- Use this section to describe your changes. If your changes required testing, include information about the testing environment and the tests you ran. If your test fixes a bug reported in an issue, don't forget to include the issue number. If your PR is still a work in progress, that's totally fine – just include a note to let us know. --> Add a rule-based French Lemmatizer following the english one and the excellent PR for [greek language optimizations](https://github.com/explosion/spaCy/pull/2558) to adapt the Lemmatizer class. ### Types of change <!-- What type of change does your PR cover? Is it a bug fix, an enhancement or new feature, or a change to the documentation? --> - Lemma dictionary used can be found [here](http://infolingu.univ-mlv.fr/DonneesLinguistiques/Dictionnaires/telechargement.html), I used the XML version. - Add several files containing exhaustive list of words for each part of speech - Add some lemma rules - Add POS that are not checked in the standard Lemmatizer, i.e PRON, DET, ADV and AUX - Modify the Lemmatizer class to check in lookup table as a last resort if POS not mentionned - Modify the lemmatize function to check in lookup table as a last resort - Init files are updated so the model can support all the functionalities mentioned above - Add words to tokenizer_exceptions_list.py in respect to regex used in tokenizer_exceptions.py ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [X] I have submitted the spaCy Contributor Agreement. - [X] I ran the tests, and all new and existing tests passed. - [X] My changes don't require a change to the documentation, or if they do, I've added all required information. * Set version to 2.0.13 * Fix formatting and consistency * Update docs for new version [ci skip] * Increment version [ci skip] * Add info on wheels [ci skip] * Adding "This is a sentence" example to Sinhala (#2846) * Add wheels badge * Update badge [ci skip] * Update README.rst [ci skip] * Update murmurhash pin * Increment version to 2.0.14.dev0 * Update GPU docs for v2.0.14 * Add wheel to setup_requires * Import prefer_gpu and require_gpu functions from Thinc * Add tests for prefer_gpu() and require_gpu() * Update requirements and setup.py * Workaround bug in thinc require_gpu * Set version to v2.0.14 * Update push-tag script * Unhack prefer_gpu * Require thinc 6.10.6 * Update prefer_gpu and require_gpu docs [ci skip] * Fix specifiers for GPU * Set version to 2.0.14.dev1 * Set version to 2.0.14 * Update Thinc version pin * Increment version * Fix msgpack-numpy version pin * Increment version * Update version to 2.0.16 * Update version [ci skip] * Redundant ')' in the Stop words' example (#2856) <!--- Provide a general summary of your changes in the title. --> ## Description <!--- Use this section to describe your changes. If your changes required testing, include information about the testing environment and the tests you ran. If your test fixes a bug reported in an issue, don't forget to include the issue number. If your PR is still a work in progress, that's totally fine – just include a note to let us know. --> ### Types of change <!-- What type of change does your PR cover? Is it a bug fix, an enhancement or new feature, or a change to the documentation? --> ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [ ] I have submitted the spaCy Contributor Agreement. - [ ] I ran the tests, and all new and existing tests passed. - [ ] My changes don't require a change to the documentation, or if they do, I've added all required information. * Documentation improvement regarding joblib and SO (#2867) Some documentation improvements ## Description 1. Fixed the dead URL to joblib 2. Fixed Stack Overflow brand name (with space) ### Types of change Documentation ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [x] My changes don't require a change to the documentation, or if they do, I've added all required information. * raise error when setting overlapping entities as doc.ents (#2880) * Fix out-of-bounds access in NER training The helper method state.B(1) gets the index of the first token of the buffer, or -1 if no such token exists. Normally this is safe because we pass this to functions like state.safe_get(), which returns an empty token. Here we used it directly as an array index, which is not okay! This error may have been the cause of out-of-bounds access errors during training. Similar errors may still be around, so much be hunted down. Hunting this one down took a long time...I printed out values across training runs and diffed, looking for points of divergence between runs, when no randomness should be allowed. * Change PyThaiNLP Url (#2876) * Fix missing comma * Add example showing a fix-up rule for space entities * Set version to 2.0.17.dev0 * Update regex version * Revert "Update regex version" This reverts commit 62358dd867d15bc6a475942dff34effba69dd70a. * Try setting older regex version, to align with conda * Set version to 2.0.17 * Add spacy-js to universe [ci-skip] * Add spacy-raspberry to universe (closes #2889) * Add script to validate universe json [ci skip] * Removed space in docs + added contributor indo (#2909) * - removed unneeded space in documentation * - added contributor info * Allow input text of length up to max_length, inclusive (#2922) * Include universe spec for spacy-wordnet component (#2919) * feat: include universe spec for spacy-wordnet component * chore: include spaCy contributor agreement * Minor formatting changes [ci skip] * Fix image [ci skip] Twitter URL doesn't work on live site * Check if the word is in one of the regular lists specific to each POS (#2886) * 💫 Create random IDs for SVGs to prevent ID clashes (#2927) Resolves #2924. ## Description Fixes problem where multiple visualizations in Jupyter notebooks would have clashing arc IDs, resulting in weirdly positioned arc labels. Generating a random ID prefix so even identical parses won't receive the same IDs for consistency (even if effect of ID clash isn't noticable here.) ### Types of change bug fix ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [x] My changes don't require a change to the documentation, or if they do, I've added all required information. * Fix typo [ci skip] * fixes symbolic link on py3 and windows (#2949) * fixes symbolic link on py3 and windows during setup of spacy using command python -m spacy link en_core_web_sm en closes #2948 * Update spacy/compat.py Co-Authored-By: cicorias <cicorias@users.noreply.github.com> * Fix formatting * Update universe [ci skip] * Catalan Language Support (#2940) * Catalan language Support * Ddding Catalan to documentation * Sort languages alphabetically [ci skip] * Update tests for pytest 4.x (#2965) <!--- Provide a general summary of your changes in the title. --> ## Description - [x] Replace marks in params for pytest 4.0 compat ([see here](https://docs.pytest.org/en/latest/deprecations.html#marks-in-pytest-mark-parametrize)) - [x] Un-xfail passing tests (some fixes in a recent update resolved a bunch of issues, but tests were apparently never updated here) ### Types of change <!-- What type of change does your PR cover? Is it a bug fix, an enhancement or new feature, or a change to the documentation? --> ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [x] My changes don't require a change to the documentation, or if they do, I've added all required information. * Fix regex pin to harmonize with conda (#2964) * Update README.rst * Fix bug where Vocab.prune_vector did not use 'batch_size' (#2977) Fixes #2976 * Fix typo * Fix typo * Remove duplicate file * Require thinc 7.0.0.dev2 Fixes bug in gpu_ops that would use cupy instead of numpy on CPU * Add missing import * Fix error IDs * Fix tests
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def test_prefer_gpu():
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try:
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import cupy # noqa: F401
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except ImportError:
assert not prefer_gpu()
💫 Port master changes over to develop (#2979) * Create aryaprabhudesai.md (#2681) * Update _install.jade (#2688) Typo fix: "models" -> "model" * Add FAC to spacy.explain (resolves #2706) * Remove docstrings for deprecated arguments (see #2703) * When calling getoption() in conftest.py, pass a default option (#2709) * When calling getoption() in conftest.py, pass a default option This is necessary to allow testing an installed spacy by running: pytest --pyargs spacy * Add contributor agreement * update bengali token rules for hyphen and digits (#2731) * Less norm computations in token similarity (#2730) * Less norm computations in token similarity * Contributor agreement * Remove ')' for clarity (#2737) Sorry, don't mean to be nitpicky, I just noticed this when going through the CLI and thought it was a quick fix. That said, if this was intention than please let me know. * added contributor agreement for mbkupfer (#2738) * Basic support for Telugu language (#2751) * Lex _attrs for polish language (#2750) * Signed spaCy contributor agreement * Added polish version of english lex_attrs * Introduces a bulk merge function, in order to solve issue #653 (#2696) * Fix comment * Introduce bulk merge to increase performance on many span merges * Sign contributor agreement * Implement pull request suggestions * Describe converters more explicitly (see #2643) * Add multi-threading note to Language.pipe (resolves #2582) [ci skip] * Fix formatting * Fix dependency scheme docs (closes #2705) [ci skip] * Don't set stop word in example (closes #2657) [ci skip] * Add words to portuguese language _num_words (#2759) * Add words to portuguese language _num_words * Add words to portuguese language _num_words * Update Indonesian model (#2752) * adding e-KTP in tokenizer exceptions list * add exception token * removing lines with containing space as it won't matter since we use .split() method in the end, added new tokens in exception * add tokenizer exceptions list * combining base_norms with norm_exceptions * adding norm_exception * fix double key in lemmatizer * remove unused import on punctuation.py * reformat stop_words to reduce number of lines, improve readibility * updating tokenizer exception * implement is_currency for lang/id * adding orth_first_upper in tokenizer_exceptions * update the norm_exception list * remove bunch of abbreviations * adding contributors file * Fixed spaCy+Keras example (#2763) * bug fixes in keras example * created contributor agreement * Adding French hyphenated first name (#2786) * Fix typo (closes #2784) * Fix typo (#2795) [ci skip] Fixed typo on line 6 "regcognizer --> recognizer" * Adding basic support for Sinhala language. (#2788) * adding Sinhala language package, stop words, examples and lex_attrs. * Adding contributor agreement * Updating contributor agreement * Also include lowercase norm exceptions * Fix error (#2802) * Fix error ValueError: cannot resize an array that references or is referenced by another array in this way. Use the resize function * added spaCy Contributor Agreement * Add charlax's contributor agreement (#2805) * agreement of contributor, may I introduce a tiny pl languge contribution (#2799) * Contributors agreement * Contributors agreement * Contributors agreement * Add jupyter=True to displacy.render in documentation (#2806) * Revert "Also include lowercase norm exceptions" This reverts commit 70f4e8adf37cfcfab60be2b97d6deae949b30e9e. * Remove deprecated encoding argument to msgpack * Set up dependency tree pattern matching skeleton (#2732) * Fix bug when too many entity types. Fixes #2800 * Fix Python 2 test failure * Require older msgpack-numpy * Restore encoding arg on msgpack-numpy * Try to fix version pin for msgpack-numpy * Update Portuguese Language (#2790) * Add words to portuguese language _num_words * Add words to portuguese language _num_words * Portuguese - Add/remove stopwords, fix tokenizer, add currency symbols * Extended punctuation and norm_exceptions in the Portuguese language * Correct error in spacy universe docs concerning spacy-lookup (#2814) * Update Keras Example for (Parikh et al, 2016) implementation (#2803) * bug fixes in keras example * created contributor agreement * baseline for Parikh model * initial version of parikh 2016 implemented * tested asymmetric models * fixed grevious error in normalization * use standard SNLI test file * begin to rework parikh example * initial version of running example * start to document the new version * start to document the new version * Update Decompositional Attention.ipynb * fixed calls to similarity * updated the README * import sys package duh * simplified indexing on mapping word to IDs * stupid python indent error * added code from https://github.com/tensorflow/tensorflow/issues/3388 for tf bug workaround * Fix typo (closes #2815) [ci skip] * Update regex version dependency * Set version to 2.0.13.dev3 * Skip seemingly problematic test * Remove problematic test * Try previous version of regex * Revert "Remove problematic test" This reverts commit bdebbef45552d698d390aa430b527ee27830f11b. * Unskip test * Try older version of regex * 💫 Update training examples and use minibatching (#2830) <!--- Provide a general summary of your changes in the title. --> ## Description Update the training examples in `/examples/training` to show usage of spaCy's `minibatch` and `compounding` helpers ([see here](https://spacy.io/usage/training#tips-batch-size) for details). The lack of batching in the examples has caused some confusion in the past, especially for beginners who would copy-paste the examples, update them with large training sets and experienced slow and unsatisfying results. ### Types of change enhancements ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [x] My changes don't require a change to the documentation, or if they do, I've added all required information. * Visual C++ link updated (#2842) (closes #2841) [ci skip] * New landing page * Add contribution agreement * Correcting lang/ru/examples.py (#2845) * Correct some grammatical inaccuracies in lang\ru\examples.py; filled Contributor Agreement * Correct some grammatical inaccuracies in lang\ru\examples.py * Move contributor agreement to separate file * Set version to 2.0.13.dev4 * Add Persian(Farsi) language support (#2797) * Also include lowercase norm exceptions * Remove in favour of https://github.com/explosion/spaCy/graphs/contributors * Rule-based French Lemmatizer (#2818) <!--- Provide a general summary of your changes in the title. --> ## Description <!--- Use this section to describe your changes. If your changes required testing, include information about the testing environment and the tests you ran. If your test fixes a bug reported in an issue, don't forget to include the issue number. If your PR is still a work in progress, that's totally fine – just include a note to let us know. --> Add a rule-based French Lemmatizer following the english one and the excellent PR for [greek language optimizations](https://github.com/explosion/spaCy/pull/2558) to adapt the Lemmatizer class. ### Types of change <!-- What type of change does your PR cover? Is it a bug fix, an enhancement or new feature, or a change to the documentation? --> - Lemma dictionary used can be found [here](http://infolingu.univ-mlv.fr/DonneesLinguistiques/Dictionnaires/telechargement.html), I used the XML version. - Add several files containing exhaustive list of words for each part of speech - Add some lemma rules - Add POS that are not checked in the standard Lemmatizer, i.e PRON, DET, ADV and AUX - Modify the Lemmatizer class to check in lookup table as a last resort if POS not mentionned - Modify the lemmatize function to check in lookup table as a last resort - Init files are updated so the model can support all the functionalities mentioned above - Add words to tokenizer_exceptions_list.py in respect to regex used in tokenizer_exceptions.py ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [X] I have submitted the spaCy Contributor Agreement. - [X] I ran the tests, and all new and existing tests passed. - [X] My changes don't require a change to the documentation, or if they do, I've added all required information. * Set version to 2.0.13 * Fix formatting and consistency * Update docs for new version [ci skip] * Increment version [ci skip] * Add info on wheels [ci skip] * Adding "This is a sentence" example to Sinhala (#2846) * Add wheels badge * Update badge [ci skip] * Update README.rst [ci skip] * Update murmurhash pin * Increment version to 2.0.14.dev0 * Update GPU docs for v2.0.14 * Add wheel to setup_requires * Import prefer_gpu and require_gpu functions from Thinc * Add tests for prefer_gpu() and require_gpu() * Update requirements and setup.py * Workaround bug in thinc require_gpu * Set version to v2.0.14 * Update push-tag script * Unhack prefer_gpu * Require thinc 6.10.6 * Update prefer_gpu and require_gpu docs [ci skip] * Fix specifiers for GPU * Set version to 2.0.14.dev1 * Set version to 2.0.14 * Update Thinc version pin * Increment version * Fix msgpack-numpy version pin * Increment version * Update version to 2.0.16 * Update version [ci skip] * Redundant ')' in the Stop words' example (#2856) <!--- Provide a general summary of your changes in the title. --> ## Description <!--- Use this section to describe your changes. If your changes required testing, include information about the testing environment and the tests you ran. If your test fixes a bug reported in an issue, don't forget to include the issue number. If your PR is still a work in progress, that's totally fine – just include a note to let us know. --> ### Types of change <!-- What type of change does your PR cover? Is it a bug fix, an enhancement or new feature, or a change to the documentation? --> ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [ ] I have submitted the spaCy Contributor Agreement. - [ ] I ran the tests, and all new and existing tests passed. - [ ] My changes don't require a change to the documentation, or if they do, I've added all required information. * Documentation improvement regarding joblib and SO (#2867) Some documentation improvements ## Description 1. Fixed the dead URL to joblib 2. Fixed Stack Overflow brand name (with space) ### Types of change Documentation ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [x] My changes don't require a change to the documentation, or if they do, I've added all required information. * raise error when setting overlapping entities as doc.ents (#2880) * Fix out-of-bounds access in NER training The helper method state.B(1) gets the index of the first token of the buffer, or -1 if no such token exists. Normally this is safe because we pass this to functions like state.safe_get(), which returns an empty token. Here we used it directly as an array index, which is not okay! This error may have been the cause of out-of-bounds access errors during training. Similar errors may still be around, so much be hunted down. Hunting this one down took a long time...I printed out values across training runs and diffed, looking for points of divergence between runs, when no randomness should be allowed. * Change PyThaiNLP Url (#2876) * Fix missing comma * Add example showing a fix-up rule for space entities * Set version to 2.0.17.dev0 * Update regex version * Revert "Update regex version" This reverts commit 62358dd867d15bc6a475942dff34effba69dd70a. * Try setting older regex version, to align with conda * Set version to 2.0.17 * Add spacy-js to universe [ci-skip] * Add spacy-raspberry to universe (closes #2889) * Add script to validate universe json [ci skip] * Removed space in docs + added contributor indo (#2909) * - removed unneeded space in documentation * - added contributor info * Allow input text of length up to max_length, inclusive (#2922) * Include universe spec for spacy-wordnet component (#2919) * feat: include universe spec for spacy-wordnet component * chore: include spaCy contributor agreement * Minor formatting changes [ci skip] * Fix image [ci skip] Twitter URL doesn't work on live site * Check if the word is in one of the regular lists specific to each POS (#2886) * 💫 Create random IDs for SVGs to prevent ID clashes (#2927) Resolves #2924. ## Description Fixes problem where multiple visualizations in Jupyter notebooks would have clashing arc IDs, resulting in weirdly positioned arc labels. Generating a random ID prefix so even identical parses won't receive the same IDs for consistency (even if effect of ID clash isn't noticable here.) ### Types of change bug fix ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [x] My changes don't require a change to the documentation, or if they do, I've added all required information. * Fix typo [ci skip] * fixes symbolic link on py3 and windows (#2949) * fixes symbolic link on py3 and windows during setup of spacy using command python -m spacy link en_core_web_sm en closes #2948 * Update spacy/compat.py Co-Authored-By: cicorias <cicorias@users.noreply.github.com> * Fix formatting * Update universe [ci skip] * Catalan Language Support (#2940) * Catalan language Support * Ddding Catalan to documentation * Sort languages alphabetically [ci skip] * Update tests for pytest 4.x (#2965) <!--- Provide a general summary of your changes in the title. --> ## Description - [x] Replace marks in params for pytest 4.0 compat ([see here](https://docs.pytest.org/en/latest/deprecations.html#marks-in-pytest-mark-parametrize)) - [x] Un-xfail passing tests (some fixes in a recent update resolved a bunch of issues, but tests were apparently never updated here) ### Types of change <!-- What type of change does your PR cover? Is it a bug fix, an enhancement or new feature, or a change to the documentation? --> ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [x] My changes don't require a change to the documentation, or if they do, I've added all required information. * Fix regex pin to harmonize with conda (#2964) * Update README.rst * Fix bug where Vocab.prune_vector did not use 'batch_size' (#2977) Fixes #2976 * Fix typo * Fix typo * Remove duplicate file * Require thinc 7.0.0.dev2 Fixes bug in gpu_ops that would use cupy instead of numpy on CPU * Add missing import * Fix error IDs * Fix tests
2018-11-29 18:30:29 +03:00
def test_require_gpu():
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try:
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import cupy # noqa: F401
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except ImportError:
with pytest.raises(ValueError):
require_gpu()
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def test_ascii_filenames():
"""Test that all filenames in the project are ASCII.
See: https://twitter.com/_inesmontani/status/1177941471632211968
"""
root = Path(__file__).parent.parent
for path in root.glob("**/*"):
assert all(ord(c) < 128 for c in path.name), path.name
def test_load_model_blank_shortcut():
"""Test that using a model name like "blank:en" works as a shortcut for
spacy.blank("en").
"""
nlp = util.load_model("blank:en")
assert nlp.lang == "en"
assert nlp.pipeline == []
with pytest.raises(ImportError):
util.load_model("blank:fjsfijsdof")
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@pytest.mark.parametrize(
"version,constraint,compatible",
[
(spacy_version, spacy_version, True),
(spacy_version, f">={spacy_version}", True),
("3.0.0", "2.0.0", False),
("3.2.1", ">=2.0.0", True),
("2.2.10a1", ">=1.0.0,<2.1.1", False),
("3.0.0.dev3", ">=1.2.3,<4.5.6", True),
("n/a", ">=1.2.3,<4.5.6", None),
("1.2.3", "n/a", None),
("n/a", "n/a", None),
],
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)
def test_is_compatible_version(version, constraint, compatible):
assert util.is_compatible_version(version, constraint) is compatible
@pytest.mark.parametrize(
"constraint,expected",
[
("3.0.0", False),
("==3.0.0", False),
(">=2.3.0", True),
(">2.0.0", True),
("<=2.0.0", True),
(">2.0.0,<3.0.0", False),
(">=2.0.0,<3.0.0", False),
("!=1.1,>=1.0,~=1.0", True),
("n/a", None),
],
)
def test_is_unconstrained_version(constraint, expected):
assert util.is_unconstrained_version(constraint) is expected
Refactor pipeline components, config and language data (#5759) * Update with WIP * Update with WIP * Update with pipeline serialization * Update types and pipe factories * Add deep merge, tidy up and add tests * Fix pipe creation from config * Don't validate default configs on load * Update spacy/language.py Co-authored-by: Ines Montani <ines@ines.io> * Adjust factory/component meta error * Clean up factory args and remove defaults * Add test for failing empty dict defaults * Update pipeline handling and methods * provide KB as registry function instead of as object * small change in test to make functionality more clear * update example script for EL configuration * Fix typo * Simplify test * Simplify test * splitting pipes.pyx into separate files * moving default configs to each component file * fix batch_size type * removing default values from component constructors where possible (TODO: test 4725) * skip instead of xfail * Add test for config -> nlp with multiple instances * pipeline.pipes -> pipeline.pipe * Tidy up, document, remove kwargs * small cleanup/generalization for Tok2VecListener * use DEFAULT_UPSTREAM field * revert to avoid circular imports * Fix tests * Replace deprecated arg * Make model dirs require config * fix pickling of keyword-only arguments in constructor * WIP: clean up and integrate full config * Add helper to handle function args more reliably Now also includes keyword-only args * Fix config composition and serialization * Improve config debugging and add visual diff * Remove unused defaults and fix type * Remove pipeline and factories from meta * Update spacy/default_config.cfg Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com> * Update spacy/default_config.cfg * small UX edits * avoid printing stack trace for debug CLI commands * Add support for language-specific factories * specify the section of the config which holds the model to debug * WIP: add Language.from_config * Update with language data refactor WIP * Auto-format * Add backwards-compat handling for Language.factories * Update morphologizer.pyx * Fix morphologizer * Update and simplify lemmatizers * Fix Japanese tests * Port over tagger changes * Fix Chinese and tests * Update to latest Thinc * WIP: xfail first Russian lemmatizer test * Fix component-specific overrides * fix nO for output layers in debug_model * Fix default value * Fix tests and don't pass objects in config * Fix deep merging * Fix lemma lookup data registry Only load the lookups if an entry is available in the registry (and if spacy-lookups-data is installed) * Add types * Add Vocab.from_config * Fix typo * Fix tests * Make config copying more elegant * Fix pipe analysis * Fix lemmatizers and is_base_form * WIP: move language defaults to config * Fix morphology type * Fix vocab * Remove comment * Update to latest Thinc * Add morph rules to config * Tidy up * Remove set_morphology option from tagger factory * Hack use_gpu * Move [pipeline] to top-level block and make [nlp.pipeline] list Allows separating component blocks from component order – otherwise, ordering the config would mean a changed component order, which is bad. Also allows initial config to define more components and not use all of them * Fix use_gpu and resume in CLI * Auto-format * Remove resume from config * Fix formatting and error * [pipeline] -> [components] * Fix types * Fix tagger test: requires set_morphology? Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com> Co-authored-by: svlandeg <sofie.vanlandeghem@gmail.com> Co-authored-by: Matthew Honnibal <honnibal+gh@gmail.com>
2020-07-22 14:42:59 +03:00
@pytest.mark.parametrize(
"dot_notation,expected",
[
(
{"token.pos": True, "token._.xyz": True},
{"token": {"pos": True, "_": {"xyz": True}}},
),
(
{"training.batch_size": 128, "training.optimizer.learn_rate": 0.01},
{"training": {"batch_size": 128, "optimizer": {"learn_rate": 0.01}}},
),
],
)
def test_dot_to_dict(dot_notation, expected):
result = util.dot_to_dict(dot_notation)
assert result == expected
assert util.dict_to_dot(result) == dot_notation