spaCy/spacy/displacy/render.py

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import uuid
from typing import Any, Dict, List, Optional, Tuple, Union
💫 Port master changes over to develop (#2979) * Create aryaprabhudesai.md (#2681) * Update _install.jade (#2688) Typo fix: "models" -> "model" * Add FAC to spacy.explain (resolves #2706) * Remove docstrings for deprecated arguments (see #2703) * When calling getoption() in conftest.py, pass a default option (#2709) * When calling getoption() in conftest.py, pass a default option This is necessary to allow testing an installed spacy by running: pytest --pyargs spacy * Add contributor agreement * update bengali token rules for hyphen and digits (#2731) * Less norm computations in token similarity (#2730) * Less norm computations in token similarity * Contributor agreement * Remove ')' for clarity (#2737) Sorry, don't mean to be nitpicky, I just noticed this when going through the CLI and thought it was a quick fix. That said, if this was intention than please let me know. * added contributor agreement for mbkupfer (#2738) * Basic support for Telugu language (#2751) * Lex _attrs for polish language (#2750) * Signed spaCy contributor agreement * Added polish version of english lex_attrs * Introduces a bulk merge function, in order to solve issue #653 (#2696) * Fix comment * Introduce bulk merge to increase performance on many span merges * Sign contributor agreement * Implement pull request suggestions * Describe converters more explicitly (see #2643) * Add multi-threading note to Language.pipe (resolves #2582) [ci skip] * Fix formatting * Fix dependency scheme docs (closes #2705) [ci skip] * Don't set stop word in example (closes #2657) [ci skip] * Add words to portuguese language _num_words (#2759) * Add words to portuguese language _num_words * Add words to portuguese language _num_words * Update Indonesian model (#2752) * adding e-KTP in tokenizer exceptions list * add exception token * removing lines with containing space as it won't matter since we use .split() method in the end, added new tokens in exception * add tokenizer exceptions list * combining base_norms with norm_exceptions * adding norm_exception * fix double key in lemmatizer * remove unused import on punctuation.py * reformat stop_words to reduce number of lines, improve readibility * updating tokenizer exception * implement is_currency for lang/id * adding orth_first_upper in tokenizer_exceptions * update the norm_exception list * remove bunch of abbreviations * adding contributors file * Fixed spaCy+Keras example (#2763) * bug fixes in keras example * created contributor agreement * Adding French hyphenated first name (#2786) * Fix typo (closes #2784) * Fix typo (#2795) [ci skip] Fixed typo on line 6 "regcognizer --> recognizer" * Adding basic support for Sinhala language. (#2788) * adding Sinhala language package, stop words, examples and lex_attrs. * Adding contributor agreement * Updating contributor agreement * Also include lowercase norm exceptions * Fix error (#2802) * Fix error ValueError: cannot resize an array that references or is referenced by another array in this way. Use the resize function * added spaCy Contributor Agreement * Add charlax's contributor agreement (#2805) * agreement of contributor, may I introduce a tiny pl languge contribution (#2799) * Contributors agreement * Contributors agreement * Contributors agreement * Add jupyter=True to displacy.render in documentation (#2806) * Revert "Also include lowercase norm exceptions" This reverts commit 70f4e8adf37cfcfab60be2b97d6deae949b30e9e. * Remove deprecated encoding argument to msgpack * Set up dependency tree pattern matching skeleton (#2732) * Fix bug when too many entity types. Fixes #2800 * Fix Python 2 test failure * Require older msgpack-numpy * Restore encoding arg on msgpack-numpy * Try to fix version pin for msgpack-numpy * Update Portuguese Language (#2790) * Add words to portuguese language _num_words * Add words to portuguese language _num_words * Portuguese - Add/remove stopwords, fix tokenizer, add currency symbols * Extended punctuation and norm_exceptions in the Portuguese language * Correct error in spacy universe docs concerning spacy-lookup (#2814) * Update Keras Example for (Parikh et al, 2016) implementation (#2803) * bug fixes in keras example * created contributor agreement * baseline for Parikh model * initial version of parikh 2016 implemented * tested asymmetric models * fixed grevious error in normalization * use standard SNLI test file * begin to rework parikh example * initial version of running example * start to document the new version * start to document the new version * Update Decompositional Attention.ipynb * fixed calls to similarity * updated the README * import sys package duh * simplified indexing on mapping word to IDs * stupid python indent error * added code from https://github.com/tensorflow/tensorflow/issues/3388 for tf bug workaround * Fix typo (closes #2815) [ci skip] * Update regex version dependency * Set version to 2.0.13.dev3 * Skip seemingly problematic test * Remove problematic test * Try previous version of regex * Revert "Remove problematic test" This reverts commit bdebbef45552d698d390aa430b527ee27830f11b. * Unskip test * Try older version of regex * 💫 Update training examples and use minibatching (#2830) <!--- Provide a general summary of your changes in the title. --> ## Description Update the training examples in `/examples/training` to show usage of spaCy's `minibatch` and `compounding` helpers ([see here](https://spacy.io/usage/training#tips-batch-size) for details). The lack of batching in the examples has caused some confusion in the past, especially for beginners who would copy-paste the examples, update them with large training sets and experienced slow and unsatisfying results. ### Types of change enhancements ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [x] My changes don't require a change to the documentation, or if they do, I've added all required information. * Visual C++ link updated (#2842) (closes #2841) [ci skip] * New landing page * Add contribution agreement * Correcting lang/ru/examples.py (#2845) * Correct some grammatical inaccuracies in lang\ru\examples.py; filled Contributor Agreement * Correct some grammatical inaccuracies in lang\ru\examples.py * Move contributor agreement to separate file * Set version to 2.0.13.dev4 * Add Persian(Farsi) language support (#2797) * Also include lowercase norm exceptions * Remove in favour of https://github.com/explosion/spaCy/graphs/contributors * Rule-based French Lemmatizer (#2818) <!--- Provide a general summary of your changes in the title. --> ## Description <!--- Use this section to describe your changes. If your changes required testing, include information about the testing environment and the tests you ran. If your test fixes a bug reported in an issue, don't forget to include the issue number. If your PR is still a work in progress, that's totally fine – just include a note to let us know. --> Add a rule-based French Lemmatizer following the english one and the excellent PR for [greek language optimizations](https://github.com/explosion/spaCy/pull/2558) to adapt the Lemmatizer class. ### Types of change <!-- What type of change does your PR cover? Is it a bug fix, an enhancement or new feature, or a change to the documentation? --> - Lemma dictionary used can be found [here](http://infolingu.univ-mlv.fr/DonneesLinguistiques/Dictionnaires/telechargement.html), I used the XML version. - Add several files containing exhaustive list of words for each part of speech - Add some lemma rules - Add POS that are not checked in the standard Lemmatizer, i.e PRON, DET, ADV and AUX - Modify the Lemmatizer class to check in lookup table as a last resort if POS not mentionned - Modify the lemmatize function to check in lookup table as a last resort - Init files are updated so the model can support all the functionalities mentioned above - Add words to tokenizer_exceptions_list.py in respect to regex used in tokenizer_exceptions.py ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [X] I have submitted the spaCy Contributor Agreement. - [X] I ran the tests, and all new and existing tests passed. - [X] My changes don't require a change to the documentation, or if they do, I've added all required information. * Set version to 2.0.13 * Fix formatting and consistency * Update docs for new version [ci skip] * Increment version [ci skip] * Add info on wheels [ci skip] * Adding "This is a sentence" example to Sinhala (#2846) * Add wheels badge * Update badge [ci skip] * Update README.rst [ci skip] * Update murmurhash pin * Increment version to 2.0.14.dev0 * Update GPU docs for v2.0.14 * Add wheel to setup_requires * Import prefer_gpu and require_gpu functions from Thinc * Add tests for prefer_gpu() and require_gpu() * Update requirements and setup.py * Workaround bug in thinc require_gpu * Set version to v2.0.14 * Update push-tag script * Unhack prefer_gpu * Require thinc 6.10.6 * Update prefer_gpu and require_gpu docs [ci skip] * Fix specifiers for GPU * Set version to 2.0.14.dev1 * Set version to 2.0.14 * Update Thinc version pin * Increment version * Fix msgpack-numpy version pin * Increment version * Update version to 2.0.16 * Update version [ci skip] * Redundant ')' in the Stop words' example (#2856) <!--- Provide a general summary of your changes in the title. --> ## Description <!--- Use this section to describe your changes. If your changes required testing, include information about the testing environment and the tests you ran. If your test fixes a bug reported in an issue, don't forget to include the issue number. If your PR is still a work in progress, that's totally fine – just include a note to let us know. --> ### Types of change <!-- What type of change does your PR cover? Is it a bug fix, an enhancement or new feature, or a change to the documentation? --> ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [ ] I have submitted the spaCy Contributor Agreement. - [ ] I ran the tests, and all new and existing tests passed. - [ ] My changes don't require a change to the documentation, or if they do, I've added all required information. * Documentation improvement regarding joblib and SO (#2867) Some documentation improvements ## Description 1. Fixed the dead URL to joblib 2. Fixed Stack Overflow brand name (with space) ### Types of change Documentation ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [x] My changes don't require a change to the documentation, or if they do, I've added all required information. * raise error when setting overlapping entities as doc.ents (#2880) * Fix out-of-bounds access in NER training The helper method state.B(1) gets the index of the first token of the buffer, or -1 if no such token exists. Normally this is safe because we pass this to functions like state.safe_get(), which returns an empty token. Here we used it directly as an array index, which is not okay! This error may have been the cause of out-of-bounds access errors during training. Similar errors may still be around, so much be hunted down. Hunting this one down took a long time...I printed out values across training runs and diffed, looking for points of divergence between runs, when no randomness should be allowed. * Change PyThaiNLP Url (#2876) * Fix missing comma * Add example showing a fix-up rule for space entities * Set version to 2.0.17.dev0 * Update regex version * Revert "Update regex version" This reverts commit 62358dd867d15bc6a475942dff34effba69dd70a. * Try setting older regex version, to align with conda * Set version to 2.0.17 * Add spacy-js to universe [ci-skip] * Add spacy-raspberry to universe (closes #2889) * Add script to validate universe json [ci skip] * Removed space in docs + added contributor indo (#2909) * - removed unneeded space in documentation * - added contributor info * Allow input text of length up to max_length, inclusive (#2922) * Include universe spec for spacy-wordnet component (#2919) * feat: include universe spec for spacy-wordnet component * chore: include spaCy contributor agreement * Minor formatting changes [ci skip] * Fix image [ci skip] Twitter URL doesn't work on live site * Check if the word is in one of the regular lists specific to each POS (#2886) * 💫 Create random IDs for SVGs to prevent ID clashes (#2927) Resolves #2924. ## Description Fixes problem where multiple visualizations in Jupyter notebooks would have clashing arc IDs, resulting in weirdly positioned arc labels. Generating a random ID prefix so even identical parses won't receive the same IDs for consistency (even if effect of ID clash isn't noticable here.) ### Types of change bug fix ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [x] My changes don't require a change to the documentation, or if they do, I've added all required information. * Fix typo [ci skip] * fixes symbolic link on py3 and windows (#2949) * fixes symbolic link on py3 and windows during setup of spacy using command python -m spacy link en_core_web_sm en closes #2948 * Update spacy/compat.py Co-Authored-By: cicorias <cicorias@users.noreply.github.com> * Fix formatting * Update universe [ci skip] * Catalan Language Support (#2940) * Catalan language Support * Ddding Catalan to documentation * Sort languages alphabetically [ci skip] * Update tests for pytest 4.x (#2965) <!--- Provide a general summary of your changes in the title. --> ## Description - [x] Replace marks in params for pytest 4.0 compat ([see here](https://docs.pytest.org/en/latest/deprecations.html#marks-in-pytest-mark-parametrize)) - [x] Un-xfail passing tests (some fixes in a recent update resolved a bunch of issues, but tests were apparently never updated here) ### Types of change <!-- What type of change does your PR cover? Is it a bug fix, an enhancement or new feature, or a change to the documentation? --> ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [x] My changes don't require a change to the documentation, or if they do, I've added all required information. * Fix regex pin to harmonize with conda (#2964) * Update README.rst * Fix bug where Vocab.prune_vector did not use 'batch_size' (#2977) Fixes #2976 * Fix typo * Fix typo * Remove duplicate file * Require thinc 7.0.0.dev2 Fixes bug in gpu_ops that would use cupy instead of numpy on CPU * Add missing import * Fix error IDs * Fix tests
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from ..errors import Errors
from ..util import escape_html, minify_html, registry
from .templates import (
TPL_DEP_ARCS,
TPL_DEP_SVG,
TPL_DEP_WORDS,
TPL_DEP_WORDS_LEMMA,
TPL_ENT,
TPL_ENT_RTL,
TPL_ENTS,
TPL_FIGURE,
TPL_KB_LINK,
TPL_PAGE,
TPL_SPAN,
TPL_SPAN_RTL,
TPL_SPAN_SLICE,
TPL_SPAN_SLICE_RTL,
TPL_SPAN_START,
TPL_SPAN_START_RTL,
TPL_SPANS,
TPL_TITLE,
)
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DEFAULT_LANG = "en"
DEFAULT_DIR = "ltr"
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DEFAULT_ENTITY_COLOR = "#ddd"
DEFAULT_LABEL_COLORS = {
"ORG": "#7aecec",
"PRODUCT": "#bfeeb7",
"GPE": "#feca74",
"LOC": "#ff9561",
"PERSON": "#aa9cfc",
"NORP": "#c887fb",
"FAC": "#9cc9cc",
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"EVENT": "#ffeb80",
"LAW": "#ff8197",
"LANGUAGE": "#ff8197",
"WORK_OF_ART": "#f0d0ff",
"DATE": "#bfe1d9",
"TIME": "#bfe1d9",
"MONEY": "#e4e7d2",
"QUANTITY": "#e4e7d2",
"ORDINAL": "#e4e7d2",
"CARDINAL": "#e4e7d2",
"PERCENT": "#e4e7d2",
}
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class SpanRenderer:
"""Render Spans as SVGs."""
style = "span"
def __init__(self, options: Dict[str, Any] = {}) -> None:
"""Initialise span renderer
options (dict): Visualiser-specific options (colors, spans)
"""
# Set up the colors and overall look
colors = dict(DEFAULT_LABEL_COLORS)
user_colors = registry.displacy_colors.get_all()
for user_color in user_colors.values():
if callable(user_color):
# Since this comes from the function registry, we want to make
# sure we support functions that *return* a dict of colors
user_color = user_color()
if not isinstance(user_color, dict):
raise ValueError(Errors.E925.format(obj=type(user_color)))
colors.update(user_color)
colors.update(options.get("colors", {}))
self.default_color = DEFAULT_ENTITY_COLOR
self.colors = {label.upper(): color for label, color in colors.items()}
# Set up how the text and labels will be rendered
self.direction = DEFAULT_DIR
self.lang = DEFAULT_LANG
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# These values are in px
self.top_offset = options.get("top_offset", 40)
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# This is how far under the top offset the span labels appear
self.span_label_offset = options.get("span_label_offset", 20)
self.offset_step = options.get("top_offset_step", 17)
# Set up which templates will be used
template = options.get("template")
if template:
self.span_template = template["span"]
self.span_slice_template = template["slice"]
self.span_start_template = template["start"]
else:
if self.direction == "rtl":
self.span_template = TPL_SPAN_RTL
self.span_slice_template = TPL_SPAN_SLICE_RTL
self.span_start_template = TPL_SPAN_START_RTL
else:
self.span_template = TPL_SPAN
self.span_slice_template = TPL_SPAN_SLICE
self.span_start_template = TPL_SPAN_START
def render(
self, parsed: List[Dict[str, Any]], page: bool = False, minify: bool = False
) -> str:
"""Render complete markup.
parsed (list): Dependency parses to render.
page (bool): Render parses wrapped as full HTML page.
minify (bool): Minify HTML markup.
RETURNS (str): Rendered SVG or HTML markup.
"""
rendered = []
for i, p in enumerate(parsed):
if i == 0:
settings = p.get("settings", {})
self.direction = settings.get("direction", DEFAULT_DIR)
self.lang = settings.get("lang", DEFAULT_LANG)
rendered.append(self.render_spans(p["tokens"], p["spans"], p.get("title")))
if page:
docs = "".join([TPL_FIGURE.format(content=doc) for doc in rendered])
markup = TPL_PAGE.format(content=docs, lang=self.lang, dir=self.direction)
else:
markup = "".join(rendered)
if minify:
return minify_html(markup)
return markup
def render_spans(
self,
tokens: List[str],
spans: List[Dict[str, Any]],
title: Optional[str],
) -> str:
"""Render span types in text.
Spans are rendered per-token, this means that for each token, we check if it's part
of a span slice (a member of a span type) or a span start (the starting token of a
given span type).
tokens (list): Individual tokens in the text
spans (list): Individual entity spans and their start, end, label, kb_id and kb_url.
title (str / None): Document title set in Doc.user_data['title'].
"""
per_token_info = self._assemble_per_token_info(tokens, spans)
markup = self._render_markup(per_token_info)
markup = TPL_SPANS.format(content=markup, dir=self.direction)
if title:
markup = TPL_TITLE.format(title=title) + markup
return markup
@staticmethod
def _assemble_per_token_info(
tokens: List[str], spans: List[Dict[str, Any]]
) -> List[Dict[str, List[Dict[str, Any]]]]:
"""Assembles token info used to generate markup in render_spans().
tokens (List[str]): Tokens in text.
spans (List[Dict[str, Any]]): Spans in text.
RETURNS (List[Dict[str, List[Dict, str, Any]]]): Per token info needed to render HTML markup for given tokens
and spans.
"""
per_token_info: List[Dict[str, List[Dict[str, Any]]]] = []
# we must sort so that we can correctly describe when spans need to "stack"
# which is determined by their start token, then span length (longer spans on top),
# then break any remaining ties with the span label
spans = sorted(
spans,
key=lambda s: (
s["start_token"],
-(s["end_token"] - s["start_token"]),
s["label"],
),
)
for s in spans:
# this is the vertical 'slot' that the span will be rendered in
# vertical_position = span_label_offset + (offset_step * (slot - 1))
s["render_slot"] = 0
for idx, token in enumerate(tokens):
# Identify if a token belongs to a Span (and which) and if it's a
# start token of said Span. We'll use this for the final HTML render
token_markup: Dict[str, Any] = {}
token_markup["text"] = token
intersecting_spans: List[Dict[str, Any]] = []
entities = []
for span in spans:
ent = {}
if span["start_token"] <= idx < span["end_token"]:
span_start = idx == span["start_token"]
ent["label"] = span["label"]
ent["is_start"] = span_start
if span_start:
# When the span starts, we need to know how many other
# spans are on the 'span stack' and will be rendered.
# This value becomes the vertical render slot for this entire span
span["render_slot"] = (
intersecting_spans[-1]["render_slot"]
if len(intersecting_spans)
else 0
) + 1
intersecting_spans.append(span)
ent["render_slot"] = span["render_slot"]
kb_id = span.get("kb_id", "")
kb_url = span.get("kb_url", "#")
ent["kb_link"] = (
TPL_KB_LINK.format(kb_id=kb_id, kb_url=kb_url) if kb_id else ""
)
entities.append(ent)
else:
# We don't specifically need to do this since we loop
# over tokens and spans sorted by their start_token,
# so we'll never use a span again after the last token it appears in,
# but if we were to use these spans again we'd want to make sure
# this value was reset correctly.
span["render_slot"] = 0
token_markup["entities"] = entities
per_token_info.append(token_markup)
return per_token_info
def _render_markup(self, per_token_info: List[Dict[str, Any]]) -> str:
"""Render the markup from per-token information"""
markup = ""
for token in per_token_info:
entities = sorted(token["entities"], key=lambda d: d["render_slot"])
# Whitespace tokens disrupt the vertical space (no line height) so that the
# span indicators get misaligned. We don't render them as individual
# tokens anyway, so we'll just not display a span indicator either.
is_whitespace = token["text"].strip() == ""
if entities and not is_whitespace:
slices = self._get_span_slices(token["entities"])
starts = self._get_span_starts(token["entities"])
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total_height = (
self.top_offset
+ self.span_label_offset
+ (self.offset_step * (len(entities) - 1))
)
markup += self.span_template.format(
text=escape_html(token["text"]),
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span_slices=slices,
span_starts=starts,
total_height=total_height,
)
else:
markup += escape_html(token["text"] + " ")
return markup
def _get_span_slices(self, entities: List[Dict]) -> str:
"""Get the rendered markup of all Span slices"""
span_slices = []
for entity in entities:
# rather than iterate over multiples of offset_step, we use entity['render_slot']
# to determine the vertical position, since that tells where
# the span starts vertically so we can extend it horizontally,
# past other spans that might have already ended
color = self.colors.get(entity["label"].upper(), self.default_color)
top_offset = self.top_offset + (
self.offset_step * (entity["render_slot"] - 1)
)
span_slice = self.span_slice_template.format(
bg=color,
top_offset=top_offset,
)
span_slices.append(span_slice)
return "".join(span_slices)
def _get_span_starts(self, entities: List[Dict]) -> str:
"""Get the rendered markup of all Span start tokens"""
span_starts = []
for entity in entities:
color = self.colors.get(entity["label"].upper(), self.default_color)
top_offset = self.top_offset + (
self.offset_step * (entity["render_slot"] - 1)
)
span_start = (
self.span_start_template.format(
bg=color,
top_offset=top_offset,
label=entity["label"],
kb_link=entity["kb_link"],
)
if entity["is_start"]
else ""
)
span_starts.append(span_start)
return "".join(span_starts)
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class DependencyRenderer:
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"""Render dependency parses as SVGs."""
style = "dep"
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def __init__(self, options: Dict[str, Any] = {}) -> None:
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"""Initialise dependency renderer.
options (dict): Visualiser-specific options (compact, word_spacing,
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arrow_spacing, arrow_width, arrow_stroke, distance, offset_x,
color, bg, font)
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"""
self.compact = options.get("compact", False)
self.word_spacing = options.get("word_spacing", 45)
self.arrow_spacing = options.get("arrow_spacing", 12 if self.compact else 20)
self.arrow_width = options.get("arrow_width", 6 if self.compact else 10)
self.arrow_stroke = options.get("arrow_stroke", 2)
self.distance = options.get("distance", 150 if self.compact else 175)
self.offset_x = options.get("offset_x", 50)
self.color = options.get("color", "#000000")
self.bg = options.get("bg", "#ffffff")
self.font = options.get("font", "Arial")
self.direction = DEFAULT_DIR
self.lang = DEFAULT_LANG
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def render(
self, parsed: List[Dict[str, Any]], page: bool = False, minify: bool = False
) -> str:
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"""Render complete markup.
parsed (list): Dependency parses to render.
page (bool): Render parses wrapped as full HTML page.
minify (bool): Minify HTML markup.
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RETURNS (str): Rendered SVG or HTML markup.
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"""
💫 Port master changes over to develop (#2979) * Create aryaprabhudesai.md (#2681) * Update _install.jade (#2688) Typo fix: "models" -> "model" * Add FAC to spacy.explain (resolves #2706) * Remove docstrings for deprecated arguments (see #2703) * When calling getoption() in conftest.py, pass a default option (#2709) * When calling getoption() in conftest.py, pass a default option This is necessary to allow testing an installed spacy by running: pytest --pyargs spacy * Add contributor agreement * update bengali token rules for hyphen and digits (#2731) * Less norm computations in token similarity (#2730) * Less norm computations in token similarity * Contributor agreement * Remove ')' for clarity (#2737) Sorry, don't mean to be nitpicky, I just noticed this when going through the CLI and thought it was a quick fix. That said, if this was intention than please let me know. * added contributor agreement for mbkupfer (#2738) * Basic support for Telugu language (#2751) * Lex _attrs for polish language (#2750) * Signed spaCy contributor agreement * Added polish version of english lex_attrs * Introduces a bulk merge function, in order to solve issue #653 (#2696) * Fix comment * Introduce bulk merge to increase performance on many span merges * Sign contributor agreement * Implement pull request suggestions * Describe converters more explicitly (see #2643) * Add multi-threading note to Language.pipe (resolves #2582) [ci skip] * Fix formatting * Fix dependency scheme docs (closes #2705) [ci skip] * Don't set stop word in example (closes #2657) [ci skip] * Add words to portuguese language _num_words (#2759) * Add words to portuguese language _num_words * Add words to portuguese language _num_words * Update Indonesian model (#2752) * adding e-KTP in tokenizer exceptions list * add exception token * removing lines with containing space as it won't matter since we use .split() method in the end, added new tokens in exception * add tokenizer exceptions list * combining base_norms with norm_exceptions * adding norm_exception * fix double key in lemmatizer * remove unused import on punctuation.py * reformat stop_words to reduce number of lines, improve readibility * updating tokenizer exception * implement is_currency for lang/id * adding orth_first_upper in tokenizer_exceptions * update the norm_exception list * remove bunch of abbreviations * adding contributors file * Fixed spaCy+Keras example (#2763) * bug fixes in keras example * created contributor agreement * Adding French hyphenated first name (#2786) * Fix typo (closes #2784) * Fix typo (#2795) [ci skip] Fixed typo on line 6 "regcognizer --> recognizer" * Adding basic support for Sinhala language. (#2788) * adding Sinhala language package, stop words, examples and lex_attrs. * Adding contributor agreement * Updating contributor agreement * Also include lowercase norm exceptions * Fix error (#2802) * Fix error ValueError: cannot resize an array that references or is referenced by another array in this way. Use the resize function * added spaCy Contributor Agreement * Add charlax's contributor agreement (#2805) * agreement of contributor, may I introduce a tiny pl languge contribution (#2799) * Contributors agreement * Contributors agreement * Contributors agreement * Add jupyter=True to displacy.render in documentation (#2806) * Revert "Also include lowercase norm exceptions" This reverts commit 70f4e8adf37cfcfab60be2b97d6deae949b30e9e. * Remove deprecated encoding argument to msgpack * Set up dependency tree pattern matching skeleton (#2732) * Fix bug when too many entity types. Fixes #2800 * Fix Python 2 test failure * Require older msgpack-numpy * Restore encoding arg on msgpack-numpy * Try to fix version pin for msgpack-numpy * Update Portuguese Language (#2790) * Add words to portuguese language _num_words * Add words to portuguese language _num_words * Portuguese - Add/remove stopwords, fix tokenizer, add currency symbols * Extended punctuation and norm_exceptions in the Portuguese language * Correct error in spacy universe docs concerning spacy-lookup (#2814) * Update Keras Example for (Parikh et al, 2016) implementation (#2803) * bug fixes in keras example * created contributor agreement * baseline for Parikh model * initial version of parikh 2016 implemented * tested asymmetric models * fixed grevious error in normalization * use standard SNLI test file * begin to rework parikh example * initial version of running example * start to document the new version * start to document the new version * Update Decompositional Attention.ipynb * fixed calls to similarity * updated the README * import sys package duh * simplified indexing on mapping word to IDs * stupid python indent error * added code from https://github.com/tensorflow/tensorflow/issues/3388 for tf bug workaround * Fix typo (closes #2815) [ci skip] * Update regex version dependency * Set version to 2.0.13.dev3 * Skip seemingly problematic test * Remove problematic test * Try previous version of regex * Revert "Remove problematic test" This reverts commit bdebbef45552d698d390aa430b527ee27830f11b. * Unskip test * Try older version of regex * 💫 Update training examples and use minibatching (#2830) <!--- Provide a general summary of your changes in the title. --> ## Description Update the training examples in `/examples/training` to show usage of spaCy's `minibatch` and `compounding` helpers ([see here](https://spacy.io/usage/training#tips-batch-size) for details). The lack of batching in the examples has caused some confusion in the past, especially for beginners who would copy-paste the examples, update them with large training sets and experienced slow and unsatisfying results. ### Types of change enhancements ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [x] My changes don't require a change to the documentation, or if they do, I've added all required information. * Visual C++ link updated (#2842) (closes #2841) [ci skip] * New landing page * Add contribution agreement * Correcting lang/ru/examples.py (#2845) * Correct some grammatical inaccuracies in lang\ru\examples.py; filled Contributor Agreement * Correct some grammatical inaccuracies in lang\ru\examples.py * Move contributor agreement to separate file * Set version to 2.0.13.dev4 * Add Persian(Farsi) language support (#2797) * Also include lowercase norm exceptions * Remove in favour of https://github.com/explosion/spaCy/graphs/contributors * Rule-based French Lemmatizer (#2818) <!--- Provide a general summary of your changes in the title. --> ## Description <!--- Use this section to describe your changes. If your changes required testing, include information about the testing environment and the tests you ran. If your test fixes a bug reported in an issue, don't forget to include the issue number. If your PR is still a work in progress, that's totally fine – just include a note to let us know. --> Add a rule-based French Lemmatizer following the english one and the excellent PR for [greek language optimizations](https://github.com/explosion/spaCy/pull/2558) to adapt the Lemmatizer class. ### Types of change <!-- What type of change does your PR cover? Is it a bug fix, an enhancement or new feature, or a change to the documentation? --> - Lemma dictionary used can be found [here](http://infolingu.univ-mlv.fr/DonneesLinguistiques/Dictionnaires/telechargement.html), I used the XML version. - Add several files containing exhaustive list of words for each part of speech - Add some lemma rules - Add POS that are not checked in the standard Lemmatizer, i.e PRON, DET, ADV and AUX - Modify the Lemmatizer class to check in lookup table as a last resort if POS not mentionned - Modify the lemmatize function to check in lookup table as a last resort - Init files are updated so the model can support all the functionalities mentioned above - Add words to tokenizer_exceptions_list.py in respect to regex used in tokenizer_exceptions.py ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [X] I have submitted the spaCy Contributor Agreement. - [X] I ran the tests, and all new and existing tests passed. - [X] My changes don't require a change to the documentation, or if they do, I've added all required information. * Set version to 2.0.13 * Fix formatting and consistency * Update docs for new version [ci skip] * Increment version [ci skip] * Add info on wheels [ci skip] * Adding "This is a sentence" example to Sinhala (#2846) * Add wheels badge * Update badge [ci skip] * Update README.rst [ci skip] * Update murmurhash pin * Increment version to 2.0.14.dev0 * Update GPU docs for v2.0.14 * Add wheel to setup_requires * Import prefer_gpu and require_gpu functions from Thinc * Add tests for prefer_gpu() and require_gpu() * Update requirements and setup.py * Workaround bug in thinc require_gpu * Set version to v2.0.14 * Update push-tag script * Unhack prefer_gpu * Require thinc 6.10.6 * Update prefer_gpu and require_gpu docs [ci skip] * Fix specifiers for GPU * Set version to 2.0.14.dev1 * Set version to 2.0.14 * Update Thinc version pin * Increment version * Fix msgpack-numpy version pin * Increment version * Update version to 2.0.16 * Update version [ci skip] * Redundant ')' in the Stop words' example (#2856) <!--- Provide a general summary of your changes in the title. --> ## Description <!--- Use this section to describe your changes. If your changes required testing, include information about the testing environment and the tests you ran. If your test fixes a bug reported in an issue, don't forget to include the issue number. If your PR is still a work in progress, that's totally fine – just include a note to let us know. --> ### Types of change <!-- What type of change does your PR cover? Is it a bug fix, an enhancement or new feature, or a change to the documentation? --> ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [ ] I have submitted the spaCy Contributor Agreement. - [ ] I ran the tests, and all new and existing tests passed. - [ ] My changes don't require a change to the documentation, or if they do, I've added all required information. * Documentation improvement regarding joblib and SO (#2867) Some documentation improvements ## Description 1. Fixed the dead URL to joblib 2. Fixed Stack Overflow brand name (with space) ### Types of change Documentation ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [x] My changes don't require a change to the documentation, or if they do, I've added all required information. * raise error when setting overlapping entities as doc.ents (#2880) * Fix out-of-bounds access in NER training The helper method state.B(1) gets the index of the first token of the buffer, or -1 if no such token exists. Normally this is safe because we pass this to functions like state.safe_get(), which returns an empty token. Here we used it directly as an array index, which is not okay! This error may have been the cause of out-of-bounds access errors during training. Similar errors may still be around, so much be hunted down. Hunting this one down took a long time...I printed out values across training runs and diffed, looking for points of divergence between runs, when no randomness should be allowed. * Change PyThaiNLP Url (#2876) * Fix missing comma * Add example showing a fix-up rule for space entities * Set version to 2.0.17.dev0 * Update regex version * Revert "Update regex version" This reverts commit 62358dd867d15bc6a475942dff34effba69dd70a. * Try setting older regex version, to align with conda * Set version to 2.0.17 * Add spacy-js to universe [ci-skip] * Add spacy-raspberry to universe (closes #2889) * Add script to validate universe json [ci skip] * Removed space in docs + added contributor indo (#2909) * - removed unneeded space in documentation * - added contributor info * Allow input text of length up to max_length, inclusive (#2922) * Include universe spec for spacy-wordnet component (#2919) * feat: include universe spec for spacy-wordnet component * chore: include spaCy contributor agreement * Minor formatting changes [ci skip] * Fix image [ci skip] Twitter URL doesn't work on live site * Check if the word is in one of the regular lists specific to each POS (#2886) * 💫 Create random IDs for SVGs to prevent ID clashes (#2927) Resolves #2924. ## Description Fixes problem where multiple visualizations in Jupyter notebooks would have clashing arc IDs, resulting in weirdly positioned arc labels. Generating a random ID prefix so even identical parses won't receive the same IDs for consistency (even if effect of ID clash isn't noticable here.) ### Types of change bug fix ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [x] My changes don't require a change to the documentation, or if they do, I've added all required information. * Fix typo [ci skip] * fixes symbolic link on py3 and windows (#2949) * fixes symbolic link on py3 and windows during setup of spacy using command python -m spacy link en_core_web_sm en closes #2948 * Update spacy/compat.py Co-Authored-By: cicorias <cicorias@users.noreply.github.com> * Fix formatting * Update universe [ci skip] * Catalan Language Support (#2940) * Catalan language Support * Ddding Catalan to documentation * Sort languages alphabetically [ci skip] * Update tests for pytest 4.x (#2965) <!--- Provide a general summary of your changes in the title. --> ## Description - [x] Replace marks in params for pytest 4.0 compat ([see here](https://docs.pytest.org/en/latest/deprecations.html#marks-in-pytest-mark-parametrize)) - [x] Un-xfail passing tests (some fixes in a recent update resolved a bunch of issues, but tests were apparently never updated here) ### Types of change <!-- What type of change does your PR cover? Is it a bug fix, an enhancement or new feature, or a change to the documentation? --> ## Checklist <!--- Before you submit the PR, go over this checklist and make sure you can tick off all the boxes. [] -> [x] --> - [x] I have submitted the spaCy Contributor Agreement. - [x] I ran the tests, and all new and existing tests passed. - [x] My changes don't require a change to the documentation, or if they do, I've added all required information. * Fix regex pin to harmonize with conda (#2964) * Update README.rst * Fix bug where Vocab.prune_vector did not use 'batch_size' (#2977) Fixes #2976 * Fix typo * Fix typo * Remove duplicate file * Require thinc 7.0.0.dev2 Fixes bug in gpu_ops that would use cupy instead of numpy on CPU * Add missing import * Fix error IDs * Fix tests
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# Create a random ID prefix to make sure parses don't receive the
# same ID, even if they're identical
id_prefix = uuid.uuid4().hex
rendered = []
for i, p in enumerate(parsed):
if i == 0:
settings = p.get("settings", {})
self.direction = settings.get("direction", DEFAULT_DIR)
self.lang = settings.get("lang", DEFAULT_LANG)
render_id = f"{id_prefix}-{i}"
svg = self.render_svg(render_id, p["words"], p["arcs"])
if p.get("title"):
svg = TPL_TITLE.format(title=p.get("title")) + svg
rendered.append(svg)
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if page:
content = "".join([TPL_FIGURE.format(content=svg) for svg in rendered])
markup = TPL_PAGE.format(
content=content, lang=self.lang, dir=self.direction
)
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else:
markup = "".join(rendered)
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if minify:
return minify_html(markup)
return markup
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def render_svg(
self,
render_id: Union[int, str],
words: List[Dict[str, Any]],
arcs: List[Dict[str, Any]],
) -> str:
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"""Render SVG.
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render_id (Union[int, str]): Unique ID, typically index of document.
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words (list): Individual words and their tags.
arcs (list): Individual arcs and their start, end, direction and label.
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RETURNS (str): Rendered SVG markup.
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"""
self.levels = self.get_levels(arcs)
self.highest_level = max(self.levels.values(), default=0)
self.offset_y = self.distance / 2 * self.highest_level + self.arrow_stroke
self.width = self.offset_x + len(words) * self.distance
self.height = self.offset_y + 3 * self.word_spacing
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self.id = render_id
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words_svg = [
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self.render_word(w["text"], w["tag"], w.get("lemma", None), i)
for i, w in enumerate(words)
]
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arcs_svg = [
self.render_arrow(a["label"], a["start"], a["end"], a["dir"], i)
for i, a in enumerate(arcs)
]
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content = "".join(words_svg) + "".join(arcs_svg)
return TPL_DEP_SVG.format(
id=self.id,
width=self.width,
height=self.height,
color=self.color,
bg=self.bg,
font=self.font,
content=content,
dir=self.direction,
lang=self.lang,
)
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def render_word(self, text: str, tag: str, lemma: str, i: int) -> str:
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"""Render individual word.
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text (str): Word text.
tag (str): Part-of-speech tag.
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i (int): Unique ID, typically word index.
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RETURNS (str): Rendered SVG markup.
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"""
y = self.offset_y + self.word_spacing
x = self.offset_x + i * self.distance
if self.direction == "rtl":
x = self.width - x
html_text = escape_html(text)
if lemma is not None:
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return TPL_DEP_WORDS_LEMMA.format(
text=html_text, tag=tag, lemma=lemma, x=x, y=y
)
return TPL_DEP_WORDS.format(text=html_text, tag=tag, x=x, y=y)
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def render_arrow(
self, label: str, start: int, end: int, direction: str, i: int
) -> str:
"""Render individual arrow.
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label (str): Dependency label.
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start (int): Index of start word.
end (int): Index of end word.
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direction (str): Arrow direction, 'left' or 'right'.
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i (int): Unique ID, typically arrow index.
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RETURNS (str): Rendered SVG markup.
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"""
if start < 0 or end < 0:
error_args = dict(start=start, end=end, label=label, dir=direction)
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raise ValueError(Errors.E157.format(**error_args))
level = self.levels[(start, end, label)]
x_start = self.offset_x + start * self.distance + self.arrow_spacing
if self.direction == "rtl":
x_start = self.width - x_start
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y = self.offset_y
x_end = (
self.offset_x
+ (end - start) * self.distance
+ start * self.distance
- self.arrow_spacing * (self.highest_level - level) / 4
)
if self.direction == "rtl":
x_end = self.width - x_end
y_curve = self.offset_y - level * self.distance / 2
if self.compact:
y_curve = self.offset_y - level * self.distance / 6
if y_curve == 0 and max(self.levels.values(), default=0) > 5:
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y_curve = -self.distance
arrowhead = self.get_arrowhead(direction, x_start, y, x_end)
arc = self.get_arc(x_start, y, y_curve, x_end)
label_side = "right" if self.direction == "rtl" else "left"
return TPL_DEP_ARCS.format(
id=self.id,
i=i,
stroke=self.arrow_stroke,
head=arrowhead,
label=label,
label_side=label_side,
arc=arc,
)
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def get_arc(self, x_start: int, y: int, y_curve: int, x_end: int) -> str:
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"""Render individual arc.
x_start (int): X-coordinate of arrow start point.
y (int): Y-coordinate of arrow start and end point.
y_curve (int): Y-corrdinate of Cubic Bézier y_curve point.
x_end (int): X-coordinate of arrow end point.
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RETURNS (str): Definition of the arc path ('d' attribute).
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"""
template = "M{x},{y} C{x},{c} {e},{c} {e},{y}"
if self.compact:
template = "M{x},{y} {x},{c} {e},{c} {e},{y}"
return template.format(x=x_start, y=y, c=y_curve, e=x_end)
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def get_arrowhead(self, direction: str, x: int, y: int, end: int) -> str:
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"""Render individual arrow head.
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direction (str): Arrow direction, 'left' or 'right'.
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x (int): X-coordinate of arrow start point.
y (int): Y-coordinate of arrow start and end point.
end (int): X-coordinate of arrow end point.
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RETURNS (str): Definition of the arrow head path ('d' attribute).
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"""
if direction == "left":
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p1, p2, p3 = (x, x - self.arrow_width + 2, x + self.arrow_width - 2)
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else:
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p1, p2, p3 = (end, end + self.arrow_width - 2, end - self.arrow_width + 2)
return f"M{p1},{y + 2} L{p2},{y - self.arrow_width} {p3},{y - self.arrow_width}"
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def get_levels(self, arcs: List[Dict[str, Any]]) -> Dict[Tuple[int, int, str], int]:
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"""Calculate available arc height "levels".
Used to calculate arrow heights dynamically and without wasting space.
args (list): Individual arcs and their start, end, direction and label.
RETURNS (dict): Arc levels keyed by (start, end, label).
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"""
arcs = [dict(t) for t in {tuple(sorted(arc.items())) for arc in arcs}]
length = max([arc["end"] for arc in arcs], default=0)
max_level = [0] * length
levels = {}
for arc in sorted(arcs, key=lambda arc: arc["end"] - arc["start"]):
level = max(max_level[arc["start"] : arc["end"]]) + 1
for i in range(arc["start"], arc["end"]):
max_level[i] = level
levels[(arc["start"], arc["end"], arc["label"])] = level
return levels
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class EntityRenderer:
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"""Render named entities as HTML."""
style = "ent"
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def __init__(self, options: Dict[str, Any] = {}) -> None:
"""Initialise entity renderer.
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options (dict): Visualiser-specific options (colors, ents)
"""
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colors = dict(DEFAULT_LABEL_COLORS)
user_colors = registry.displacy_colors.get_all()
for user_color in user_colors.values():
if callable(user_color):
# Since this comes from the function registry, we want to make
# sure we support functions that *return* a dict of colors
user_color = user_color()
if not isinstance(user_color, dict):
raise ValueError(Errors.E925.format(obj=type(user_color)))
colors.update(user_color)
colors.update(options.get("colors", {}))
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self.default_color = DEFAULT_ENTITY_COLOR
self.colors = {label.upper(): color for label, color in colors.items()}
self.ents = options.get("ents", None)
if self.ents is not None:
self.ents = [ent.upper() for ent in self.ents]
self.direction = DEFAULT_DIR
self.lang = DEFAULT_LANG
template = options.get("template")
if template:
self.ent_template = template
else:
if self.direction == "rtl":
self.ent_template = TPL_ENT_RTL
else:
self.ent_template = TPL_ENT
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def render(
self, parsed: List[Dict[str, Any]], page: bool = False, minify: bool = False
) -> str:
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"""Render complete markup.
parsed (list): Dependency parses to render.
page (bool): Render parses wrapped as full HTML page.
minify (bool): Minify HTML markup.
RETURNS (str): Rendered SVG or HTML markup.
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"""
rendered = []
for i, p in enumerate(parsed):
if i == 0:
settings = p.get("settings", {})
self.direction = settings.get("direction", DEFAULT_DIR)
self.lang = settings.get("lang", DEFAULT_LANG)
rendered.append(self.render_ents(p["text"], p["ents"], p.get("title")))
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if page:
docs = "".join([TPL_FIGURE.format(content=doc) for doc in rendered])
markup = TPL_PAGE.format(content=docs, lang=self.lang, dir=self.direction)
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else:
markup = "".join(rendered)
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if minify:
return minify_html(markup)
return markup
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def render_ents(
self, text: str, spans: List[Dict[str, Any]], title: Optional[str]
) -> str:
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"""Render entities in text.
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text (str): Original text.
spans (list): Individual entity spans and their start, end, label, kb_id and kb_url.
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title (str / None): Document title set in Doc.user_data['title'].
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"""
markup = ""
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offset = 0
for span in spans:
label = span["label"]
start = span["start"]
end = span["end"]
kb_id = span.get("kb_id", "")
kb_url = span.get("kb_url", "#")
kb_link = TPL_KB_LINK.format(kb_id=kb_id, kb_url=kb_url) if kb_id else ""
additional_params = span.get("params", {})
entity = escape_html(text[start:end])
fragments = text[offset:start].split("\n")
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for i, fragment in enumerate(fragments):
markup += escape_html(fragment)
if len(fragments) > 1 and i != len(fragments) - 1:
markup += "<br>"
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if self.ents is None or label.upper() in self.ents:
color = self.colors.get(label.upper(), self.default_color)
ent_settings = {
"label": label,
"text": entity,
"bg": color,
"kb_link": kb_link,
}
ent_settings.update(additional_params)
markup += self.ent_template.format(**ent_settings)
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else:
markup += entity
offset = end
fragments = text[offset:].split("\n")
for i, fragment in enumerate(fragments):
markup += escape_html(fragment)
if len(fragments) > 1 and i != len(fragments) - 1:
markup += "<br>"
markup = TPL_ENTS.format(content=markup, dir=self.direction)
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if title:
markup = TPL_TITLE.format(title=title) + markup
return markup