* implement textcat resizing for TextCatCNN
* resizing textcat in-place
* simplify code
* ensure predictions for old textcat labels remain the same after resizing (WIP)
* fix for softmax
* store softmax as attr
* fix ensemble weight copy and cleanup
* restructure slightly
* adjust documentation, update tests and quickstart templates to use latest versions
* extend unit test slightly
* revert unnecessary edits
* fix typo
* ensemble architecture won't be resizable for now
* use resizable layer (WIP)
* revert using resizable layer
* resizable container while avoid shape inference trouble
* cleanup
* ensure model continues training after resizing
* use fill_b parameter
* use fill_defaults
* resize_layer callback
* format
* bump thinc to 8.0.4
* bump spacy-legacy to 3.0.6
The behavior of `spacy.Corpus.v1` is unexpected enough for `max_length
!= 0` that `0` is a better default for users creating a new config with
the quickstart.
If not, documents are skipped, sometimes the entire corpus is skipped,
and sometimes documents are (quite unexpectedly for your average user)
split into sentences.
* Check for unsupported cats values
* Only show labels if train/dev mismatched
* Don't show label counts (only counting positive labels seems odd)
* Use warnings for mismatched train/dev labels
This came up in #7878, but if --resume-path is a directory then loading
the weights will fail. On Linux this will give a straightforward error
message, but on Windows it gives "Permission Denied", which is
confusing.
* Fix percent unk display
This was showing (ratio %), so 10% would show as 0.10%. Fix by
multiplying ration by 100.
Might want to add a warning if this is over a threshold.
* Only show whole-integer percents
* Add empty lines at the end of Python files
* Only prepend the lang code if it's not there already
* Update spacy/cli/package.py
* fix whitespace stripping
* Replace negative rows with 0 in StaticVectors
Replace negative row indices with 0-vectors in `StaticVectors`.
* Increase versions related to StaticVectors
* Increase versions of all architctures and layers related to
`StaticVectors`
* Improve efficiency of 0-vector operations
Parallel `spacy-legacy` PR: https://github.com/explosion/spacy-legacy/pull/5
* Update config defaults to new versions
* Update docs
* Terminology: deprecated vs obsolete
Typically, deprecated is used for functionality that is bound to become unavailable but that can still be used. Obsolete is used for features that have been removed. In E941, I think what is meant is "obsolete" since loading a model by a shortcut simply does not work anymore (and throws an error). This is different from downloading a model with a shortcut, which is deprecated but still works.
In light of this, perhaps all other error codes should be checked as well.
* clarify that the link command is removed and not just deprecated
Co-authored-by: svlandeg <sofie.vanlandeghem@gmail.com>
* Update debug data further for v3
* Remove new/existing label distinction (new labels are not immediately
distinguishable because the pipeline is already initialized)
* Warn on missing labels in training data for all components except parser
* Separate textcat and textcat_multilabel sections
* Add section for morphologizer
* Reword missing label warnings
* add multi-label textcat to menu
* add infobox on textcat API
* add info to v3 migration guide
* small edits
* further fixes in doc strings
* add infobox to textcat architectures
* add textcat_multilabel to overview of built-in components
* spelling
* fix unrelated warn msg
* Add textcat_multilabel to quickstart [ci skip]
* remove separate documentation page for multilabel_textcategorizer
* small edits
* positive label clarification
* avoid duplicating information in self.cfg and fix textcat.score
* fix multilabel textcat too
* revert threshold to storage in cfg
* revert threshold stuff for multi-textcat
Co-authored-by: Ines Montani <ines@ines.io>
* Add hint for --gpu-id to CLI device info
If the user has `cupy` and an available GPU, add a hint about using
`--gpu-id 0` to the CLI output.
* Undo change to original CPU message
Now that `nlp.evaluate()` does not modify the examples, rerun the
pipeline on the (limited) texts in order to provide the predicted
annotation in the displacy output option.
* add capture argument to project_run and run_commands
* git bump to 3.0.1
* Set version to 3.0.1.dev0
Co-authored-by: Matthew Honnibal <honnibal+gh@gmail.com>
When `--no-cache-dir` is present, it prevents caching to properly function.
If the user still wants to do this, there is the possibility to pass options with `user_pip_args`.
But you should not enforce options like these. In my case this is preventing some docker build (using buildkit caching) to have proper caching of models.
* Allow output_path to be None during training
* Fix cat scoring (?)
* Improve error message for weighted None score
* Improve messages
So we can call this in other places etc.
* FIx output path check
* Use latest wasabi
* Revert "Improve error message for weighted None score"
This reverts commit 7059926763.
* Exclude None scores from final score by default
It's otherwise very difficult to keep track of the score weights if we modify a config programmatically, source components etc.
* Update warnings and use logger.warning
* Spacy Cli info method causing backward compatibility issues #6791
fix backward compatibility by setting default value to exclude in info
method.
* setting empty list as default argument is dangerous.
so setting default to None and then setting it to emptylist, if None.
Reference : https://nikos7am.com/posts/mutable-default-arguments/
Validate both `[initialize]` and `[training]` in `debug data` and
`nlp.initialize()` with separate config validation error blocks that
indicate which block of the config is being validated.
* fix TorchBiLSTMEncoder documentation
* ensure the types of the encoding Tok2vec layers are correct
* update references from v1 to v2 for the new architectures
* multi-label textcat component
* formatting
* fix comment
* cleanup
* fix from #6481
* random edit to push the tests
* add explicit error when textcat is called with multi-label gold data
* fix error nr
* small fix
* Switch converters to generator functions
To reduce the memory usage when converting large corpora, refactor the
convert methods to be generator functions.
* Update tests
Remove the non-working `--use-chars` option from the train CLI. The
implementation of the option across component types and the CLI settings
could be fixed, but the `CharacterEmbed` model does not work on GPU in
v2 so it's better to remove it.
* Handle missing reference values in scorer
Handle missing values in reference doc during scoring where it is
possible to detect an unset state for the attribute. If no reference
docs contain annotation, `None` is returned instead of a score. `spacy
evaluate` displays `-` for missing scores and the missing scores are
saved as `None`/`null` in the metrics.
Attributes without unset states:
* `token.head`: relies on `token.dep` to recognize unset values
* `doc.cats`: unable to handle missing annotation
Additional changes:
* add optional `has_annotation` check to `score_scans` to replace
`doc.sents` hack
* update `score_token_attr_per_feat` to handle missing and empty morph
representations
* fix bug in `Doc.has_annotation` for normalization of `IS_SENT_START`
vs. `SENT_START`
* Fix import
* Update return types
* small fix in example imports
* throw error when train_corpus or dev_corpus is not a string
* small fix in custom logger example
* limit macro_auc to labels with 2 annotations
* fix typo
* also create parents of output_dir if need be
* update documentation of textcat scores
* refactor TextCatEnsemble
* fix tests for new AUC definition
* bump to 3.0.0a42
* update docs
* rename to spacy.TextCatEnsemble.v2
* spacy.TextCatEnsemble.v1 in legacy
* cleanup
* small fix
* update to 3.0.0rc2
* fix import that got lost in merge
* cursed IDE
* fix two typos
* Make logging and progress easier to control
* Update docs
* Cleanup errors
* Fix ConfigValidationError
* Pass stdout/stderr, not wasabi.Printer
* Fix type
* Upd logging example
* Fix logger example
* Fix type
* reorder so tagmap is replaced only if a custom file is provided.
* Remove unneeded variable initialization
Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
