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7837 Commits

Author SHA1 Message Date
Ines Montani
a5f6ab4943
Merge pull request #6098 from adrianeboyd/feature/doc-init 2020-09-21 18:35:20 +02:00
Adriane Boyd
f212303729 Add sent_starts to Doc.__init__ 
Add sent_starts to `Doc.__init__`. Officially specify `is_sent_start`
values but also convert to and accept `sent_start` internally.
 2020-09-21 17:59:09 +02:00
svlandeg
447b3e5787 Merge remote-tracking branch 'upstream/develop' into fix/debug_model 
# Conflicts:
#	spacy/cli/debug_model.py
 2020-09-21 16:58:40 +02:00
Ines Montani
b3327c1e45 Increment version [ci skip] 2020-09-21 16:04:30 +02:00
Ines Montani
e8bcaa44f1 Don't auto-decompress archives with smart_open [ci skip] 2020-09-21 16:01:46 +02:00
Adriane Boyd
6aa91c7ca0 Make user_data keyword-only 2020-09-21 16:00:06 +02:00
svlandeg
eb9b447960 Merge remote-tracking branch 'upstream/develop' into fix/debug_model 
# Conflicts:
#	spacy/cli/debug_model.py
 2020-09-21 14:05:16 +02:00
Adriane Boyd
ce455f30ca Fix formatting 2020-09-21 13:53:29 +02:00
Adriane Boyd
bc02e86494 Extend Doc.__init__ with additional annotation 
Mostly copying from `spacy.tests.util.get_doc`, add additional kwargs to
`Doc.__init__` to initialize the most common doc/token values.
 2020-09-21 13:36:24 +02:00
Ines Montani
758ead8a47 Sync overrides with CLI overrides 2020-09-21 12:50:13 +02:00
Ines Montani
5497acf49a Support config overrides via environment variables 2020-09-21 11:25:10 +02:00
Ines Montani
1114219ae3 Tidy up and auto-format 2020-09-21 10:59:07 +02:00
Ines Montani
b2302c0a1c Improve error for missing dependency 2020-09-20 17:44:51 +02:00
Matthew Honnibal
8fb59d958c Format 2020-09-20 16:31:48 +02:00
Matthew Honnibal
dc22771f87 Fix sparse checkout 2020-09-20 16:30:05 +02:00
Matthew Honnibal
a0fb5e50db Use simple git clone call if not sparse 2020-09-20 16:22:04 +02:00
Matthew Honnibal
2c24d633d0 Use updated run_command 2020-09-20 16:21:43 +02:00
Matthew Honnibal
889128e5c5 Improve error handling in run_command 2020-09-20 16:20:57 +02:00
Ines Montani
554c9a2497 Update docs [ci skip] 2020-09-20 12:30:53 +02:00
svlandeg
6db1d5dc0d trying some stuff 2020-09-19 19:11:30 +02:00
Ines Montani
e863b3dc14
Merge pull request #6092 from adrianeboyd/bugfix/load-vocab-lookups-2 2020-09-19 12:33:38 +02:00
Sofie Van Landeghem
39872de1f6
Introducing the gpu_allocator (#6091) 
* rename 'use_pytorch_for_gpu_memory' to 'gpu_allocator'

* --code instead of --code-path

* update documentation

* avoid querying the "system" section directly

* add explanation of gpu_allocator to TF/PyTorch section in docs

* fix typo

* fix typo 2

* use set_gpu_allocator from thinc 8.0.0a34

* default null instead of empty string
 2020-09-19 01:17:02 +02:00
Adriane Boyd
47080fba98 Minor renaming / refactoring 
* Rename loader to `spacy.LookupsDataLoader.v1`, add debugging message
* Make `Vocab.lookups` a property
 2020-09-18 19:43:19 +02:00
svlandeg
73ff52b9ec hack for tok2vec listener 2020-09-18 16:43:15 +02:00
Adriane Boyd
eed4b785f5 Load vocab lookups tables at beginning of training 
Similar to how vectors are handled, move the vocab lookups to be loaded
at the start of training rather than when the vocab is initialized,
since the vocab doesn't have access to the full config when it's
created.

The option moves from `nlp.load_vocab_data` to `training.lookups`.

Typically these tables will come from `spacy-lookups-data`, but any
`Lookups` object can be provided.

The loading from `spacy-lookups-data` is now strict, so configs for each
language should specify the exact tables required. This also makes it
easier to control whether the larger clusters and probs tables are
included.

To load `lexeme_norm` from `spacy-lookups-data`:

```
[training.lookups]
@misc = "spacy.LoadLookupsData.v1"
lang = ${nlp.lang}
tables = ["lexeme_norm"]
```
 2020-09-18 15:59:16 +02:00
Ines Montani
a127fa475e
Merge pull request #6078 from svlandeg/fix/corpus 2020-09-18 14:44:21 +02:00
Matthew Honnibal
bbdb5f62b7
Temporary work-around for scoring a subset of components (#6090) 
* Try hacking the scorer to work around sentence boundaries

* Upd scorer

* Set dev version

* Upd scorer hack

* Fix version

* Improve comment on hack
 2020-09-18 14:26:42 +02:00
Adriane Boyd
a88106e852
Remove W106: HEAD and SENT_START in doc.from_array (#6086) 
* Remove W106: HEAD and SENT_START in doc.from_array

This warning was hacky and being triggered too often.

* Fix test
 2020-09-18 03:01:29 +02:00
svlandeg
e4fc7e0222 fixing output sample to proper 2D array 2020-09-17 22:34:36 +02:00
Ines Montani
3865214343 Use consistent shortcut 2020-09-17 16:57:02 +02:00
svlandeg
35a3931064 fix typo 2020-09-17 16:36:27 +02:00
svlandeg
ddfc1fc146 add pretraining option to init config 2020-09-17 16:05:40 +02:00
svlandeg
427dbecdd6 cleanup and formatting 2020-09-17 11:48:04 +02:00
svlandeg
0c35885751 generalize corpora, dot notation for dev and train corpus 2020-09-17 11:38:59 +02:00
svlandeg
781fae678b Merge remote-tracking branch 'upstream/develop' into fix/corpus 2020-09-17 09:24:36 +02:00
Matthew Honnibal
8303d101a5 Set version to v3.0.0a19 2020-09-17 00:18:49 +02:00
Adriane Boyd
7e4cd7575c
Refactor Docs.is_ flags (#6044) 
* Refactor Docs.is_ flags

* Add derived `Doc.has_annotation` method

  * `Doc.has_annotation(attr)` returns `True` for partial annotation

  * `Doc.has_annotation(attr, require_complete=True)` returns `True` for
    complete annotation

* Add deprecation warnings to `is_tagged`, `is_parsed`, `is_sentenced`
and `is_nered`

* Add `Doc._get_array_attrs()`, which returns a full list of `Doc` attrs
for use with `Doc.to_array`, `Doc.to_bytes` and `Doc.from_docs`. The
list is the `DocBin` attributes list plus `SPACY` and `LENGTH`.

Notes on `Doc.has_annotation`:

* `HEAD` is converted to `DEP` because heads don't have an unset state

* Accept `IS_SENT_START` as a synonym of `SENT_START`

Additional changes:

* Add `NORM`, `ENT_ID` and `SENT_START` to default attributes for
`DocBin`

* In `Doc.from_array()` the presence of `DEP` causes `HEAD` to override
`SENT_START`

* In `Doc.from_array()` using `attrs` other than
`Doc._get_array_attrs()` (i.e., a user's custom list rather than our
default internal list) with both `HEAD` and `SENT_START` shows a warning
that `HEAD` will override `SENT_START`

* `set_children_from_heads` does not require dependency labels to set
sentence boundaries and sets `sent_start` for all non-sentence starts to
`-1`

* Fix call to set_children_form_heads

Co-authored-by: Matthew Honnibal <honnibal+gh@gmail.com>
 2020-09-17 00:14:01 +02:00
Adriane Boyd
a119667a36
Clean up spacy.tokens (#6046) 
* Clean up spacy.tokens

* Update `set_children_from_heads`:
  * Don't check `dep` when setting lr_* or sentence starts
  * Set all non-sentence starts to `False`

* Use `set_children_from_heads` in `Token.head` setter
  * Reduce similar/duplicate code (admittedly adds a bit of overhead)
  * Update sentence starts consistently

* Remove unused `Doc.set_parse`

* Minor changes:
  * Declare cython variables (to avoid cython warnings)
  * Clean up imports

* Modify set_children_from_heads to set token range

Modify `set_children_from_heads` so that it adjust tokens within a
specified range rather then the whole document.

Modify the `Token.head` setter to adjust only the tokens affected by the
new head assignment.
 2020-09-16 20:32:38 +02:00
Matthew Honnibal
c776594ab1 Fix 2020-09-16 18:15:14 +02:00
Matthew Honnibal
4a573d18b3 Add comment 2020-09-16 17:51:29 +02:00
Matthew Honnibal
d31afc8334 Fix Language.link_components when model is None 2020-09-16 17:49:48 +02:00
Adriane Boyd
f3db3f6fe0
Add vectors option to CharacterEmbed (#6069) 
* Add vectors option to CharacterEmbed

* Update spacy/pipeline/morphologizer.pyx

* Adjust default morphologizer config

Co-authored-by: Matthew Honnibal <honnibal+gh@gmail.com>
 2020-09-16 17:45:04 +02:00
Adriane Boyd
d722a439aa
Remove unneeded methods in senter and morphologizer (#6074) 
Now that the tagger doesn't manage the tag map, the child classes senter
and morphologizer don't need to override the serialization methods.
 2020-09-16 17:39:41 +02:00
Adriane Boyd
87c329c711
Set rule-based lemmatizers as default (#6076) 
For languages without provided models and with lemmatizer rules in
`spacy-lookups-data`, make the rule-based lemmatizer the default:
Bengali, Persian, Norwegian, Swedish
 2020-09-16 17:37:29 +02:00
svlandeg
1040e250d8 actual commit with test for custom readers with ml_datasets >= 0.2 2020-09-16 16:41:28 +02:00
svlandeg
714a5a05c6 test for custom readers with ml_datasets >= 0.2 2020-09-16 16:39:55 +02:00
svlandeg
0d1392340f Merge remote-tracking branch 'upstream/develop' into fix/corpus 2020-09-15 23:17:08 +02:00
svlandeg
f420aa1138 use e.value to get to the ExceptionInfo value 2020-09-15 22:30:09 +02:00
svlandeg
7336657662 corpus is a Dict 2020-09-15 22:07:16 +02:00
svlandeg
51fa929f47 rewrite train_corpus to corpus.train in config 2020-09-15 21:58:04 +02:00
svlandeg
bd87e8686e move tests to correct subdir 2020-09-15 21:40:38 +02:00
Ines Montani
aaf01689a1 Merge branch 'develop' of https://github.com/explosion/spaCy into develop 2020-09-15 14:24:42 +02:00
Ines Montani
91a6637f74 Remove extra pipe config values before merging 2020-09-15 14:24:17 +02:00
Ines Montani
d3d7f92f05 Fix lang check and error handling in Language.from_config 2020-09-15 14:24:06 +02:00
Ines Montani
2ed6e2a218 Auto-format 2020-09-15 14:20:04 +02:00
Ines Montani
2214d1bb7b
Merge pull request #6067 from explosion/feature/spacy-blank-from-config 2020-09-15 14:18:33 +02:00
Ines Montani
253ba5ef14 Raise for bad Vocab values 2020-09-15 13:25:34 +02:00
svlandeg
7677e5c0e2 fix wandb logger when calling multiple times from same script 2020-09-15 12:56:33 +02:00
Ines Montani
eff9406718 Support vocab arg in spacy.blank 2020-09-15 11:39:36 +02:00
Ines Montani
99549a5ace Fix consistency and update docs 2020-09-15 11:37:37 +02:00
Ines Montani
7dfc4bc062 Allow overriding meta from spacy.blank 2020-09-15 11:12:12 +02:00
Ines Montani
0f943157af Delegate to Language.from_config in spacy.blank 2020-09-15 11:07:55 +02:00
Ines Montani
e977086a9a Update default pretraining config [ci skip] 2020-09-15 01:12:02 +02:00
Ines Montani
154752f9c2 Update docs and consistency [ci skip] 2020-09-15 00:32:49 +02:00
Ines Montani
9cc304c194
Merge pull request #6064 from explosion/fix/sparse-checkout-ux 
Fix sparse checkout and error handling
 2020-09-15 00:32:20 +02:00
Matthew Honnibal
475323cd36 Set version to v3.0.0a18 2020-09-14 22:05:43 +02:00
Matthew Honnibal
e8378b57bc Fix test 2020-09-14 21:21:13 +02:00
Matthew Honnibal
adf0bab23a Merge branch 'develop' of https://github.com/explosion/spaCy into develop 2020-09-14 21:04:49 +02:00
Matthew Honnibal
ae15fa9688 Fix iob converter 2020-09-14 21:02:18 +02:00
Sofie Van Landeghem
3216a33149
positive_label config for textcat (#6062) 
* hook up positive_label in textcat

* unit tests

* documentation

* formatting

* tests

* fix typo

* move verify_config to after begin_training

* revert accidential commit
 2020-09-14 17:08:00 +02:00
Ines Montani
c052017025 Fix sparse checkout and error handling 2020-09-14 14:12:58 +02:00
Matthew Honnibal
fdd2340f6c Set version to v3.0.0a17 2020-09-13 23:52:03 +02:00
Ines Montani
416deb412f Prevent duplicate traceback on CalledProcessError [ci skip] 2020-09-13 19:28:54 +02:00
Ines Montani
61a4ef0b46 Fix syntax error 2020-09-13 19:23:09 +02:00
Matthew Honnibal
b693d2d224 Fix speed report in table 2020-09-13 17:39:31 +02:00
Sofie Van Landeghem
744df9814a
define threshold for scoring textcat in TextCat config (#6055) 
* define threshold for scoring textcat in TextCat config

* fix unit test and documentation
 2020-09-13 14:15:52 +02:00
Adriane Boyd
ab270364f1
Modify Token.morph to enable unsetting (#6043) 
Modify `Token.morph` property so that `Token.c.morph` can be reset back
to an internal value of `0`. Allow setting `Token.morph` from a hash as
long as the morph string is already in the `StringStore`, setting it
indirectly through `Token.morph_` so that the value is added to the
morphology. If the hash is not in the `StringStore`, raise an error.
 2020-09-13 14:06:07 +02:00
Adriane Boyd
c7bd631b5f
Fix token.idx for special cases with affixes (#6035) 2020-09-13 14:05:36 +02:00
Matthew Honnibal
54c40223a1
Improve v3 pretrain command (#6040) 
* Starts to run

* Update pretrain script

* Update corpus

* Update pretrain schema

* Remove outdated test

* Make JsonlTexts produce Example objects.
 2020-09-13 14:05:05 +02:00
Ines Montani
febb99916d Tidy up and auto-format [ci skip] 2020-09-13 10:55:36 +02:00
Ines Montani
a5633b205f Fix handling of errors around git [ci skip] 2020-09-13 10:52:28 +02:00
Ines Montani
f8846c198d Update types and docstrings 2020-09-13 10:52:02 +02:00
Sofie Van Landeghem
e92e850c72
Raise if empty examples (#6052) 
* raise error if no valid Example objects were found during initialization

* fix max_length parameter

* remove commit from other branch

Co-authored-by: Matthew Honnibal <honnibal+gh@gmail.com>
 2020-09-12 21:01:53 +02:00
Matthew Honnibal
37347830d4 Fix reading in GloVe vectors 2020-09-12 17:31:18 +02:00
Ines Montani
b41be87213
Merge pull request #6051 from svlandeg/feature/cli-config 2020-09-12 17:12:35 +02:00
Ines Montani
eedaaaec75 Fix handling of existing asset without checksum [ci skip] 2020-09-12 17:02:53 +02:00
svlandeg
a75cfe0da6 Merge remote-tracking branch 'upstream/develop' into feature/cli-config 2020-09-12 14:44:40 +02:00
svlandeg
115147804a string_to_list to parse comma-separated string into a list 2020-09-12 14:43:22 +02:00
Ines Montani
f886f5bbc8
Merge pull request #6048 from explosion/fix/clone-compat 2020-09-12 10:30:49 +02:00
svlandeg
711166a75a prevent overwriting score_weights 2020-09-11 15:12:05 +02:00
Ines Montani
62eec33bc4 Fix meta.json validation 2020-09-11 11:38:33 +02:00
Ines Montani
0b2e07215d Support overwriting name on spacy package 2020-09-11 11:38:28 +02:00
svlandeg
5b94aeece9 support pipeline as "list in string" 2020-09-11 11:08:46 +02:00
Ines Montani
1bce432b4a Adjust message [ci skip] 2020-09-11 10:00:49 +02:00
Ines Montani
5acd4fbcd8 Merge branch 'develop' into fix/clone-compat 2020-09-11 09:58:30 +02:00
Ines Montani
761bd60d43 Adjust info message 2020-09-11 09:57:00 +02:00
Ines Montani
6831161bfa Resolve path to be extra sure 2020-09-11 09:56:49 +02:00
svlandeg
1723fb73c4 remove brol 2020-09-10 17:44:59 +02:00
svlandeg
08a831ce83 process trailing slash if any 2020-09-10 17:39:52 +02:00
Ines Montani
3e83a509bb WIP: fix project clone compatibility 2020-09-10 15:49:13 +02:00