Commit Graph

6828 Commits

Author SHA1 Message Date
svlandeg
102c8c7e2f fix fan_in renaming 2020-05-12 13:56:10 +02:00
Matthew Honnibal
eb117e2fce Add load_config_from_str helper 2020-05-02 14:09:21 +02:00
Matthew Honnibal
b2ef6100af
Only run backprop once when shared tok2vec weights (#5331)
Previously, pipelines with shared tok2vec weights would call the
tok2vec backprop callback multiple times, once for each pipeline
component. This caused errors for PyTorch, and was inefficient.

Instead, accumulate the gradient for all but one component, and just
call the callback once.
2020-04-21 19:30:41 +02:00
Matthew Honnibal
6918d99b6c
Improve GPU usage for train-with-config (#5330)
* Adjust for no ops in Optimizer

* Fix gpu in train-from-config

* Update train-from-config script

* Fix parser

* Fix GPU efficiency of padding backprop
2020-04-20 22:06:28 +02:00
Sofie Van Landeghem
42364dcd9f
Remove "pala" tokenizer exception for Spanish (#5265) 2020-04-09 10:21:20 +02:00
Sofie Van Landeghem
b2e93be867
Optimizer defaults (#5244)
* set optimizer defaults to mimic thinc 7 + bump to dev6

* larger error range for senter overfitting test
2020-04-03 13:02:46 +02:00
adrianeboyd
b71a11ff6d
Update morphologizer (#5108)
* Add pos and morph scoring to Scorer

Add pos, morph, and morph_per_type to `Scorer`. Report pos and morph
accuracy in `spacy evaluate`.

* Update morphologizer for v3

* switch to tagger-based morphologizer
* use `spacy.HashCharEmbedCNN` for morphologizer defaults
* add `Doc.is_morphed` flag

* Add morphologizer to train CLI

* Add basic morphologizer pipeline tests

* Add simple morphologizer training example

* Remove subword_features from CharEmbed models

Remove `subword_features` argument from `spacy.HashCharEmbedCNN.v1` and
`spacy.HashCharEmbedBiLSTM.v1` since in these cases `subword_features`
is always `False`.

* Rename setting in morphologizer example

Use `with_pos_tags` instead of `without_pos_tags`.

* Fix kwargs for spacy.HashCharEmbedBiLSTM.v1

* Remove defaults for spacy.HashCharEmbedBiLSTM.v1

Remove default `nM/nC` for `spacy.HashCharEmbedBiLSTM.v1`.

* Set random seed for textcat overfitting test
2020-04-02 14:46:32 +02:00
Sofie Van Landeghem
ab59f3124e
fix NEL overfitting test for GPU (#5236) 2020-04-02 10:32:52 +02:00
Sofie Van Landeghem
311133e579
Train textcat with config (#5143)
* bring back default build_text_classifier method

* remove _set_dims_ hack in favor of proper dim inference

* add tok2vec initialize to unit test

* small fixes

* add unit test for various textcat config settings

* logistic output layer does not have nO

* fix window_size setting

* proper fix

* fix W initialization

* Update textcat training example

* Use ml_datasets
* Convert training data to `Example` format
* Use `n_texts` to set proportionate dev size

* fix _init renaming on latest thinc

* avoid setting a non-existing dim

* update to thinc==8.0.0a2

* add BOW and CNN defaults for easy testing

* various experiments with train_textcat script, fix softmax activation in textcat bow

* allow textcat train script to work on other datasets as well

* have dataset as a parameter

* train textcat from config, with example config

* add config for training textcat

* formatting

* fix exclusive_classes

* fixing BOW for GPU

* bump thinc to 8.0.0a3 (not published yet so CI will fail)

* add in link_vectors_to_models which got deleted

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2020-03-29 19:40:36 +02:00
adrianeboyd
ce0e538068
Check whether doc is instantiated in Example.get_gold_parses() (#5167)
* Check whether doc is instantiated

When creating docs to pair with gold parses, modify test to check
whether a doc is unset rather than whether it contains tokens.

* Restore test of evaluate on an empty doc

* Set a minimal gold.orig for the scorer

Without a minimal gold.orig the scorer can't evaluate empty docs. This
is the v3 equivalent of #4925.
2020-03-29 13:57:00 +02:00
Sofie Van Landeghem
d6d95674c1
bugfix in span similarity (#5155)
* bugfix in span similarity

* also rewrite doc.pyx for clarity

* formatting
2020-03-29 13:56:07 +02:00
Sofie Van Landeghem
1f9852abc3
Fix parser @ GPU (#5210)
* ensure self.bias is numpy array in parser model

* 2 more little bug fixes for parser on GPU

* removing testing GPU statement

* remove commented code
2020-03-28 23:09:35 +01:00
Sofie Van Landeghem
9b412516e7
Fixing pickling of the parser (#5218)
* fix __reduce__ for pickling parser

* setting the move object as 'state' during pickling

* unskip test_issue4725 - works again
2020-03-27 19:35:26 +01:00
Ines Montani
92b9b631ef xfail -> skip 2020-03-27 10:51:32 +01:00
Ines Montani
ee4bb0e3b6 Fix import 2020-03-26 21:44:18 +01:00
Ines Montani
4fe2299586 xfail hanging test 2020-03-26 20:58:13 +01:00
Ines Montani
f12a46472c Remove unicode declarations 2020-03-26 15:18:32 +01:00
Ines Montani
7453df79d1 Fix argument 2020-03-26 14:09:02 +01:00
Ines Montani
e7341db5dc Add sent_start to pattern schema 2020-03-26 14:05:40 +01:00
Ines Montani
70ee4ef4fd Fix small errors 2020-03-26 13:47:31 +01:00
Ines Montani
46568f40a7 Merge branch 'master' into tmp/sync 2020-03-26 13:38:14 +01:00
adrianeboyd
8d3563f1c4
Minor bugfixes for train CLI (#5186)
* Omit per_type scores from model-best calculations

The addition of per_type scores to the included metrics (#4911) causes
errors when they're compared while determining the best model, so omit
them for this `max()` comparison.

* Add default speed data for interrupted train CLI

Add better speed meta defaults so that an interrupted iteration still
produces a best model.

Co-authored-by: Ines Montani <ines@ines.io>
2020-03-26 10:46:50 +01:00
adrianeboyd
a04f802099
Fix GoldParse init when token count differs (#5191)
Fix the `GoldParse` initialization when the number of tokens has changed
(due to merging subtokens with the parser).
2020-03-26 10:46:23 +01:00
adrianeboyd
d88a377bed
Remove Vectors.from_glove (#5209) 2020-03-26 10:45:47 +01:00
Ines Montani
828acffc12 Tidy up and auto-format 2020-03-25 12:28:12 +01:00
adrianeboyd
86c43e55fa
Improve Lithuanian tokenization (#5205)
* Improve Lithuanian tokenization

Modify Lithuanian tokenization to improve performance for
UD_Lithuanian-ALKSNIS.

* Update Lithuanian tokenizer tests
2020-03-25 11:28:12 +01:00
adrianeboyd
1a944e5976
Improve Italian tokenization (#5204)
Improve Italian tokenization for UD_Italian-ISDT.
2020-03-25 11:28:02 +01:00
adrianeboyd
923a453449
Modifications/updates to Portuguese tokenization (#5203)
Modifications to Portuguese tokenization for UD_Portuguese-Bosque.
Instead of splitting contactions as exceptions, they are kept as merged
tokens.
2020-03-25 11:27:53 +01:00
adrianeboyd
4117a5c705
Improve French tokenization (#5202)
Improve French tokenization for UD_French-Sequoia.
2020-03-25 11:27:42 +01:00
Ines Montani
a3d09ffe61
Merge pull request #5201 from adrianeboyd/feature/ud-tokenization-nb-v2
Improved tokenization for UD_Norwegian-Bokmaal
2020-03-25 11:27:31 +01:00
Sofie Van Landeghem
218e1706ac
Bugfix linking vectors (#5196)
* restore call to _load_vectors

* bump to thinc 8.0.0a3

* bump to 3.0.0.dev4
2020-03-25 10:20:11 +01:00
Adriane Boyd
09d442f5ad Merge remote-tracking branch 'upstream/master' into feature/ud-tokenization-da 2020-03-25 09:41:52 +01:00
Adriane Boyd
cba2d1d972 Disable failing abbreviation test
UD_Danish-DDT has (as far as I can tell) hallucinated periods after
abbreviations, so the changes are an artifact of the corpus and not due
to anything meaningful about Danish tokenization.
2020-03-25 09:39:26 +01:00
Adriane Boyd
79737adb90 Improved tokenization for UD_Norwegian-Bokmaal 2020-03-25 08:54:02 +01:00
Ines Montani
5f2afa0479
Merge pull request #5185 from adrianeboyd/bugfix/de-punctuation-style
Improve German tokenizer settings style
2020-03-24 16:38:32 +01:00
Adriane Boyd
2897a73559 Improve German tokenizer settings style 2020-03-23 19:23:47 +01:00
Baciccin
3b53617a69 Add Ligurian language 2020-03-19 21:37:01 -07:00
Ines Montani
558032017e
Merge pull request #5157 from svlandeg/bugfix/language
remove unnecessary itertools call
2020-03-16 15:04:25 +01:00
Ines Montani
c68f20b398
Merge pull request #5146 from adrianeboyd/bugfix/assert-docs-equal-sents
Fix sents comparison in test util
2020-03-16 14:59:32 +01:00
svlandeg
fba219f737 remove unnecessary itertools call 2020-03-16 08:31:36 +01:00
svlandeg
59000ee21d fix serialization of empty doc + unit test 2020-03-13 16:07:56 +01:00
Adriane Boyd
423849f94a Fix sents comparison in test util
Due to changes to `Span` (#5005), spans from different documents are now
never equal. Check `Token.is_sent_start` values instead.
2020-03-13 09:25:23 +01:00
Matthew Honnibal
26a90f011b Set version to v2.2.4 2020-03-12 11:30:41 +01:00
svlandeg
c4d030dbf6 remove accidental commit 2020-03-09 18:10:54 +01:00
svlandeg
1724a4f75b additional information if doc is empty 2020-03-09 18:08:18 +01:00
Ines Montani
1d6aec805d Fix formatting and update docs for v2.2.4 2020-03-09 11:17:20 +01:00
Mark Abraham
0345135167
Tokenizer to_disk and from_disk now ensure paths (#5116)
* Tokenizer to_disk and from_disk now ensure strings are converted to paths

Fixes #5115

* Sign contributor agreement
2020-03-08 13:25:56 +01:00
Sofie Van Landeghem
5847be6022
Tok2Vec: extract-embed-encode (#5102)
* avoid changing original config

* fix elif structure, batch with just int crashes otherwise

* tok2vec example with doc2feats, encode and embed architectures

* further clean up MultiHashEmbed

* further generalize Tok2Vec to work with extract-embed-encode parts

* avoid initializing the charembed layer with Docs (for now ?)

* small fixes for bilstm config (still does not run)

* rename to core layer

* move new configs

* walk model to set nI instead of using core ref

* fix senter overfitting test to be more similar to the training data (avoid flakey behaviour)
2020-03-08 13:23:18 +01:00
adrianeboyd
993758c58f
Remove unnecessary iterator in Language.pipe (#5101)
Remove iterator over `raw_texts` with `iterator.tee()` in
`Language.pipe` that is never consumed and consumes memory
unnecessarily.
2020-03-08 13:22:25 +01:00
Sofie Van Landeghem
1a2b8fc264
set vector of merged entity (#5085)
* merge_entities sets the vector in the vocab for the merged token

* add unit test

* import unicode_literals

* move code to _merge function

* only set vector if vocab has non-zero vectors
2020-03-06 14:45:28 +01:00
adrianeboyd
c95ce96c44
Update sentence recognizer (#5109)
* Update sentence recognizer

* rename `sentrec` to `senter`
* use `spacy.HashEmbedCNN.v1` by default
* update to follow `Tagger` modifications
* remove component methods that can be inherited from `Tagger`
* add simple initialization and overfitting pipeline tests

* Update serialization test for senter
2020-03-06 14:45:02 +01:00
Sofie Van Landeghem
6ac9fc0619
Unit test for NEL functionality (#5114)
* empty begin_training for sentencizer

* overfitting unit test for entity linker

* fixed NEL IO by storing the entity_vector_length in the cfg
2020-03-06 14:42:23 +01:00
Ines Montani
b0cfab317f Merge branch 'develop' into refactor/simplify-warnings 2020-03-04 16:38:55 +01:00
Muhammad Irfan
224a7f8e94 examples 2020-03-04 15:49:06 +05:00
Muhammad Irfan
03376c9d9b Basque language added and tested. 2020-03-04 11:58:56 +05:00
adrianeboyd
9be90dbca3
Improve token head verification (#5079)
* Improve token head verification

Improve the verification for valid token heads when heads are set:

* in `Token.head`: heads come from the same document
* in `Doc.from_array()`: head indices are within the bounds of the
document

* Improve error message
2020-03-03 21:44:51 +01:00
adrianeboyd
8c20dae6f7
Fix model-final/model-best meta from train CLI (#5093)
* Fix model-final/model-best meta

* include speed and accuracy from final iteration
* combine with speeds from base model if necessary

* Include token_acc metric for all components
2020-03-03 21:43:25 +01:00
Sofie Van Landeghem
a0998868ff
prevent updating cfg if the Model was already defined (#5078) 2020-03-03 13:58:56 +01:00
Sofie Van Landeghem
d307e9ca58
take care of global vectors in multiprocessing (#5081)
* restore load_nlp.VECTORS in the child process

* add unit test

* fix test

* remove unnecessary import

* add utf8 encoding

* import unicode_literals
2020-03-03 13:58:22 +01:00
adrianeboyd
d078b47c81
Break out of infinite loop as intended (#5077) 2020-03-03 12:29:05 +01:00
adrianeboyd
697bec764d
Normalize IS_SENT_START to SENT_START for Matcher (#5080) 2020-03-03 12:22:39 +01:00
adrianeboyd
2281c4708c
Restore empty tokenizer properties (#5026)
* Restore empty tokenizer properties

* Check for types in tokenizer.from_bytes()

* Add test for setting empty tokenizer rules
2020-03-02 11:55:02 +01:00
Sofie Van Landeghem
c6b12ab02a
Bugfix/get doc (#5049)
* new (broken) unit test

* fixing get_doc method
2020-03-02 11:49:28 +01:00
Ines Montani
648f61d077
Tidy up compiler flags and imports (#5071) 2020-03-02 11:48:10 +01:00
Ines Montani
7efaa76168 Update errors.py 2020-02-28 12:23:31 +01:00
Ines Montani
37691e6d5d Simplify warnings 2020-02-28 12:20:23 +01:00
Ines Montani
5da3ad682a Tidy up and auto-format 2020-02-28 11:57:41 +01:00
adrianeboyd
65d7bab10f
Initialize all values in a2b/b2a in new align (#5063) 2020-02-27 18:43:00 +01:00
Sofie Van Landeghem
06f0a8daa0
Default settings to configurations (#4995)
* fix grad_clip naming

* cleaning up pretrained_vectors out of cfg

* further refactoring Model init's

* move Model building out of pipes

* further refactor to require a model config when creating a pipe

* small fixes

* making cfg in nn_parser more consistent

* fixing nr_class for parser

* fixing nn_parser's nO

* fix printing of loss

* architectures in own file per type, consistent naming

* convenience methods default_tagger_config and default_tok2vec_config

* let create_pipe access default config if available for that component

* default_parser_config

* move defaults to separate folder

* allow reading nlp from package or dir with argument 'name'

* architecture spacy.VocabVectors.v1 to read static vectors from file

* cleanup

* default configs for nel, textcat, morphologizer, tensorizer

* fix imports

* fixing unit tests

* fixes and clean up

* fixing defaults, nO, fix unit tests

* restore parser IO

* fix IO

* 'fix' serialization test

* add *.cfg to manifest

* fix example configs with additional arguments

* replace Morpohologizer with Tagger

* add IO bit when testing overfitting of tagger (currently failing)

* fix IO - don't initialize when reading from disk

* expand overfitting tests to also check IO goes OK

* remove dropout from HashEmbed to fix Tagger performance

* add defaults for sentrec

* update thinc

* always pass a Model instance to a Pipe

* fix piped_added statement

* remove obsolete W029

* remove obsolete errors

* restore byte checking tests (work again)

* clean up test

* further test cleanup

* convert from config to Model in create_pipe

* bring back error when component is not initialized

* cleanup

* remove calls for nlp2.begin_training

* use thinc.api in imports

* allow setting charembed's nM and nC

* fix for hardcoded nM/nC + unit test

* formatting fixes

* trigger build
2020-02-27 18:42:27 +01:00
Adriane Boyd
9f740a9891 Add a few more Danish tokenizer exceptions 2020-02-26 14:59:03 +01:00
Ines Montani
1c212215cd
Merge pull request #5064 from adrianeboyd/feature/german-tokenization
Improve German tokenization
2020-02-26 13:41:44 +01:00
Adriane Boyd
d1f703d78d Improve German tokenization
Improve German tokenization with respect to Tiger.
2020-02-26 13:06:52 +01:00
Ines Montani
ed9358420e Merge branch 'master' into pr/5060 2020-02-26 12:51:29 +01:00
adrianeboyd
ff184b7a9c
Add tag_map argument to CLI debug-data and train (#4750) (#5038)
Add an argument for a path to a JSON-formatted tag map, which is used to
update and extend the default language tag map.
2020-02-26 12:10:38 +01:00
svlandeg
18ff97589d update spacy to 2.2.4.dev0 2020-02-26 10:50:05 +01:00
svlandeg
fc6e34c3a1 fix bugs from porting master to develop 2020-02-26 08:44:22 +01:00
Ines Montani
c1a5ece65f Tidy up setup and update requirements tests 2020-02-25 15:46:39 +01:00
Ines Montani
5d21d3e8b9 Merge branch 'develop' into pr/5008 2020-02-25 15:24:47 +01:00
Ines Montani
d50152b917
Merge pull request #5019 from questoph/master
Optimizing tokenization for Luxembourgish (dealing with apostrophe infixes)
2020-02-25 14:48:50 +01:00
Ines Montani
4440a072d2
Merge pull request #5006 from svlandeg/bugfix/multiproc-underscore
load Underscore state when multiprocessing
2020-02-25 14:46:02 +01:00
svlandeg
d821c95eb0 debugging prints 2020-02-23 17:38:33 +01:00
svlandeg
58568bd0cd fix 2020-02-23 16:45:37 +01:00
svlandeg
0f55e51704 assert we found the root_dir 2020-02-23 16:33:58 +01:00
svlandeg
783da088ea avoid try except 2020-02-23 16:21:21 +01:00
svlandeg
b49a3afd0c use clean_underscore fixture 2020-02-23 15:49:20 +01:00
Tom Keefe
ddf63b97a8
make idx available via to_array (#5030) 2020-02-22 14:13:06 +01:00
Sofie Van Landeghem
44f4142ce4
add two abbreviations and some additional unit tests (#5040) 2020-02-22 14:12:32 +01:00
Sofie Van Landeghem
479bd8d09f
add lemma option to displacy 'dep' visualiser (#5041)
* add lemma option to displacy 'dep' visualiser

* more compact list comprehension

* add option to doc

* fix test and add lemmas to util.get_doc

* fix capital

* remove lemma from get_doc

* cleanup
2020-02-22 14:11:51 +01:00
adrianeboyd
2164e71ea8
Improved Romanian tokenization for UD RRT (#5036)
Modifications to Romanian tokenization to improve tokenization for
UD_Romanian-RRT.
2020-02-19 16:15:59 +01:00
svlandeg
9f1447bf71 where areth thou, file ? 2020-02-19 17:09:29 +02:00
svlandeg
9834527f2c hack to switch between CLI folder setup and local setup 2020-02-19 16:22:48 +02:00
svlandeg
5c2f645470 root dir one level up 2020-02-19 16:15:56 +02:00
svlandeg
b20351792a assert prints for more clarity 2020-02-19 15:51:53 +02:00
Ines Montani
a3335d36b8 Merge branch 'develop' into refactor/remove-symlinks 2020-02-18 17:22:20 +01:00
Ines Montani
09cbeaef27 Remove symlinks, data dir and related stuff 2020-02-18 17:20:17 +01:00
Ines Montani
e3f40a6a0f Tidy up and auto-format 2020-02-18 15:38:18 +01:00
Ines Montani
1278161f47 Tidy up and fix issues 2020-02-18 15:17:03 +01:00
Ines Montani
de11ea753a Merge branch 'master' into develop 2020-02-18 14:47:23 +01:00
Ines Montani
80e95d02b1 Allow spacy attr in token pattern 2020-02-18 14:32:53 +01:00
Jan Jessewitsch
c7e4fe9c5c
Fix/Improve german stop words (#5024)
* Fix german stop words

Two stop words ("einige" and  "einigen") are sticking together.
Remove three nouns that may serve as stop words in a specific context (e.g. religious or news) but are not applicable for general use.

* Create Jan-711.md
2020-02-17 18:59:22 +01:00