Commit Graph

8938 Commits

Author SHA1 Message Date
github-actions[bot]
6d4db5c3c7
Auto-format code with black (#10106)
Co-authored-by: explosion-bot <explosion-bot@users.noreply.github.com>
2022-01-21 10:01:10 +01:00
Duygu Altinok
47a2916801
Intify IOB (#9738)
* added iob to int

* added tests

* added iob strings

* added error

* blacked attrs

* Update spacy/tests/lang/test_attrs.py

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Update spacy/attrs.pyx

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* added iob strings as global

* minor refinement with iob

* removed iob strings from token

* changed to uppercase

* cleaned and went back to master version

* imported iob from attrs

* Update and format errors

* Support and test both str and int ENT_IOB key

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2022-01-20 13:19:38 +01:00
Duygu Altinok
268ddf8a06
Add ENT_IOB key to Matcher (#9649)
* added new field

* added exception for IOb strings

* minor refinement to schema

* removed field

* fixed typo

* imported numeriacla val

* changed the code bit

* cosmetics

* added test for matcher

* set ents of moc docs

* added invalid pattern

* minor update to documentation

* blacked matcher

* added pattern validation

* add IOB vals to schema

* changed into test

* mypy compat

* cleaned left over

* added compat import

* changed type

* added compat import

* changed literal a bit

* went back to old

* made explicit type

* Update spacy/schemas.py

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Update spacy/schemas.py

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Update spacy/schemas.py

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2022-01-20 13:18:39 +01:00
Paul O'Leary McCann
32bd3856b3
Rename FACILITY to FAC in color list (#10067)
This matches the English models
2022-01-20 12:00:28 +01:00
Adriane Boyd
a55212fca0
Determine labels by factory name in debug data (#10079)
* Determine labels by factory name in debug data

For all components, return labels for all components with the
corresponding factory name rather than for only the default name.

For `spancat`, return labels as a dict keyed by `spans_key`.

* Refactor for typing

* Add test

* Use assert instead of cast, removed unneeded arg

* Mark test as slow
2022-01-20 11:42:52 +01:00
Richard Hudson
e9c6314539
Bugfix for similarity return types (#10051) 2022-01-20 11:40:46 +01:00
Daniël de Kok
50d2a2c930
User fewer Vector internals (#9879)
* Use Vectors.shape rather than Vectors.data.shape

* Use Vectors.size rather than Vectors.data.size

* Add Vectors.to_ops to move data between different ops

* Add documentation for Vector.to_ops
2022-01-18 17:14:35 +01:00
Adriane Boyd
4dfd559e55
Fix spaces in Doc.from_docs for empty docs (#10052)
Fix spaces in `Doc.from_docs(ensure_whitespace=True)` for cases where an
doc ending in whitespace is followed by an empty doc.
2022-01-18 17:12:42 +01:00
Paul O'Leary McCann
c28e33637b
Mark flaky spancat test so it doesn't fail the build (#10075)
* Mark flaky spancat test so it doesn't fail the build

* Skip, don't run and ignore
2022-01-18 09:36:28 +01:00
Adriane Boyd
add52935ff
Revert "Bump sudachipy version (#9917)" (#10071)
This reverts commit 58bdd8607b.
2022-01-17 10:38:37 +01:00
Paul O'Leary McCann
58bdd8607b
Bump sudachipy version (#9917)
* Edited Slovenian stop words list (#9707)

* Noun chunks for Italian (#9662)

* added it vocab

* copied portuguese

* added possessive determiner

* added conjed Nps

* added nmoded Nps

* test misc

* more examples

* fixed typo

* fixed parenth

* fixed comma

* comma fix

* added syntax iters

* fix some index problems

* fixed index

* corrected heads for test case

* fixed tets case

* fixed determiner gender

* cleaned left over

* added example with apostophe

* French NP review (#9667)

* adapted from pt

* added basic tests

* added fr vocab

* fixed noun chunks

* more examples

* typo fix

* changed naming

* changed the naming

* typo fix

* Add Japanese kana characters to default exceptions (fix #9693) (#9742)

This includes the main kana, or phonetic characters, used in Japanese.

There are some supplemental kana blocks in Unicode outside the BMP that
could also be included, but because their actual use is rare I omitted
them for now, but maybe they should be added. The omitted blocks are:

- Kana Supplement
- Kana Extended (A and B)
- Small Kana Extension

* Remove NER words from stop words in Norwegian (#9820)

Default stop words in Norwegian bokmål (nb) in Spacy contain important entities, e.g. France, Germany, Russia, Sweden and USA, police district, important units of time, e.g. months and days of the week, and organisations.

Nobody expects their presence among the default stop words. There is a danger of users complying with the general recommendation of filtering out stop words, while being unaware of filtering out important entities from their data.

See explanation in https://github.com/explosion/spaCy/issues/3052#issuecomment-986756711 and comment https://github.com/explosion/spaCy/issues/3052#issuecomment-986951831

* Bump sudachipy version

* Update sudachipy versions

* Bump versions

Bumping to the most recent dictionary just to keep thing current.
Bumping sudachipy to 5.2 because older versions don't support recent
dictionaries.

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
Co-authored-by: Richard Hudson <richard@explosion.ai>
Co-authored-by: Duygu Altinok <duygu@explosion.ai>
Co-authored-by: Haakon Meland Eriksen <haakon.eriksen@far.no>
2022-01-17 08:16:22 +01:00
Daniël de Kok
28299644fc
Speed up the StateC::L feature function (#10019)
* Speed up the StateC::L feature function

This function gets the n-th most-recent left-arc with a particular head.
Before this change, StateC::L would construct a vector of all left-arcs
with the given head and then pick the n-th most recent from that vector.
Since the number of left-arcs strongly correlates with the doc length
and the feature is constructed for every transition, this can make
transition-parsing quadratic.

With this change StateC::L:

- Searches left-arcs backwards.
- Stops early when the n-th matching transition is found.
- Does not construct a vector (reducing memory pressure).

This change doesn't avoid the linear search when the transition that is
queried does not occur in the left-arcs. Regardless, performance is
improved quite a bit with very long docs:

Before:

   N  Time

 400   3.3
 800   5.4
1600  11.6
3200  30.7

After:

   N  Time

 400   3.2
 800   5.0
1600   9.5
3200  23.2

We can probably do better with more tailored data structures, but I
first wanted to make a low-impact PR.

Found while investigating #9858.

* StateC::L: simplify loop
2022-01-13 09:03:55 +01:00
Ryn Daniels
057b8c64c0
Check for assets with size of 0 bytes (#10026)
* Check for assets with size of 0 bytes

* Update spacy/cli/project/assets.py

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2022-01-12 10:34:23 +01:00
Lj Miranda
00e7bf5ffd
Add a few docs to the default_config.cfg (#9981)
* Clarify patience hyperparameter

The current value for patience doesn't seem to indicate that it's
pointing to the number of steps. It may be useful to specify that
explicitly.

Ref: https://github.com/explosion/spaCy/discussions/7450
Ref: https://github.com/explosion/spaCy/discussions/7465

* Update docs for max_steps
2022-01-05 09:16:40 +01:00
Duygu Altinok
55cf492218
Feat/debug data warn spread ents (#9960)
* added check for crossing boundaries

* formatted blacked

* Rephrasing slightly

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2022-01-04 18:22:10 +01:00
Sofie Van Landeghem
56dcb39fb7
Fix references to config file in the docs & UX (#9961)
* doc fixes around config file

* fix typo

* clarify default
2022-01-04 14:31:26 +01:00
Sofie Van Landeghem
029a48e340
fix type of lexeme.rank (#9979) 2022-01-04 13:15:25 +01:00
Peter Baumgartner
72abf9e102
MultiHashEmbed vector docs correction (#9918) 2021-12-27 11:18:08 +01:00
Adriane Boyd
837d241b68
Make floret murmurhash endian-neutral (#9735) 2021-12-20 17:11:31 +01:00
Adriane Boyd
94fbd88521
Use dict.copy().items() instead of list(.items()) (#9868) 2021-12-16 09:17:33 +01:00
antonpibm
ac45ae3779
Update Tokenizer documentation to reflect token_match and url_match signatures (#9859) 2021-12-15 09:34:33 +01:00
Adriane Boyd
800737b416
Set version to v3.2.1 (#9823) 2021-12-07 10:51:45 +01:00
Adriane Boyd
a0cdc2b007
Use Language.pipe in evaluate (#9800) 2021-12-06 20:39:15 +01:00
Adriane Boyd
9964243eb2
Make the Tagger neg_prefix configurable (#9802) 2021-12-06 18:04:44 +01:00
Duygu Altinok
b56b9e7f31
Entity ruler remove pattern (#9685)
* added ruler coe

* added error for none existing pattern

* changed error to warning

* changed error to warning

* added basic tests

* fixed place

* added test files

* went back to error

* went back to pattern error

* minor change to docs

* changed style

* changed doc

* changed error slightly

* added remove to phrasem api

* error key already existed

* phrase matcher match code to api

* blacked tests

* moved comments before expr

* corrected error no

* Update website/docs/api/entityruler.md

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Update website/docs/api/entityruler.md

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2021-12-06 15:32:49 +01:00
Natalia Rodnova
472740d613
Added sents property to Span for Spans spanning over several sentences (#9699)
* Added sents property to Span class that returns a generator of sentences the Span belongs to

* Added description to Span.sents property

* Update test_span to clarify the difference between span.sent and span.sents

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Update spacy/tests/doc/test_span.py

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Fix documentation typos in spacy/tokens/span.pyx

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Update Span.sents doc string in spacy/tokens/span.pyx

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Parametrized test_span_spans

* Corrected Span.sents to check for span-level hook first. Also, made Span.sent respect doc-level sents hook if no span-level hook is provided

* Corrected Span ocumentation copy/paste issue

* Put back accidentally deleted lines

* Fixed formatting in span.pyx

* Moved check for SENT_START annotation after user hooks in Span.sents

* add version where the property was introduced

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2021-12-06 09:58:01 +01:00
Lj Miranda
7d50804644
Migrate regression tests into the main test suite (#9655)
* Migrate regressions 1-1000

* Move serialize test to correct file

* Remove tests that won't work in v3

* Migrate regressions 1000-1500

Removed regression test 1250 because v3 doesn't support the old LEX
scheme anymore.

* Add missing imports in serializer tests

* Migrate tests 1500-2000

* Migrate regressions from 2000-2500

* Migrate regressions from 2501-3000

* Migrate regressions from 3000-3501

* Migrate regressions from 3501-4000

* Migrate regressions from 4001-4500

* Migrate regressions from 4501-5000

* Migrate regressions from 5001-5501

* Migrate regressions from 5501 to 7000

* Migrate regressions from 7001 to 8000

* Migrate remaining regression tests

* Fixing missing imports

* Update docs with new system [ci skip]

* Update CONTRIBUTING.md

- Fix formatting
- Update wording

* Remove lemmatizer tests in el lang

* Move a few tests into the general tokenizer

* Separate Doc and DocBin tests
2021-12-04 20:34:48 +01:00
Daniël de Kok
72f7f4e68a
morphologizer: avoid recreating label tuple for each token (#9764)
* morphologizer: avoid recreating label tuple for each token

The `labels` property converts the dictionary key set to a tuple. This
property was used for every annotated token, recreating the tuple over
and over again.

Construct the tuple once in the set_annotations function and reuse it.

On a Finnish pipeline that I was experimenting with, this results in a
speedup of ~15% (~13000 -> ~15000 WPS).

* tagger: avoid recreating label tuple for each token
2021-11-30 11:58:59 +01:00
Narayan Acharya
1be8a4dab3
Displacy serve entity linking support without manual=True support. (#9748)
* Add support for kb_id to be displayed via displacy.serve. The current support is only limited to the manual option in displacy.render

* Commit to check pre-commit hooks are run.

* Update spacy/displacy/__init__.py

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Changes as per suggestions on the PR.

* Update website/docs/api/top-level.md

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Update website/docs/api/top-level.md

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* tag option as new from 3.2.1 onwards

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
Co-authored-by: svlandeg <sofie.vanlandeghem@gmail.com>
2021-11-29 17:13:26 +01:00
Paul O'Leary McCann
ac05de2c6c
Fix Language-specific factory handling in package command (#9674)
* Use internal names for factories

If a component factory is registered like `@French.factory(...)` instead
of `@Language.factory(...)`, the name in the factories registry will be
prefixed with the language code. However in the nlp.config object the
factory will be listed without the language code. The `add_pipe` code
has fallback logic to handle this, but packaging code and the registry
itself don't.

This change makes it so that the factory name in nlp.config is the
language-specific form. It's not clear if this will break anything else,
but it does seem to fix the inconsistency and resolve the specific user
issue that brought this to our attention.

* Change approach to use fallback in package lookup

This adds fallback logic to the package lookup, so it doesn't have to
touch the way the config is built. It seems to fix the tests too.

* Remove unecessary line

* Add test

Thsi also adds an assert that seems to have been forgotten.
2021-11-29 08:31:02 +01:00
Richard Hudson
7b134b8fbd
New tests for a number of alpha languages (#9703)
* Added Slovak

* Added Slovenian tests

* Added Estonian tests

* Added Croatian tests

* Added Latvian tests

* Added Icelandic tests

* Added Afrikaans tests

* Added language-independent tests

* Added Kannada tests

* Tidied up

* Added Albanian tests

* Formatted with black

* Added failing tests for anomalies

* Update spacy/tests/lang/af/test_text.py

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Added context to failing Estonian tokenizer test

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Added context to failing Croatian tokenizer test

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Added context to failing Icelandic tokenizer test

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Added context to failing Latvian tokenizer test

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Added context to failing Slovak tokenizer test

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Added context to failing Slovenian tokenizer test

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2021-11-28 21:59:23 +01:00
Natalia Rodnova
a4c43e5c57
Allow Matcher to match on ENT_ID and ENT_KB_ID (#9688)
* Added ENT_ID and ENT_KB_ID into the list of the attributes that Matcher matches on

* Added ENT_ID and ENT_KB_ID to TEST_PATTERNS in test_pattern_validation.py. Disabled tests that I added before

* Update website/docs/api/matcher.md

* Format

* Remove skipped tests

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2021-11-24 10:37:10 +01:00
Duygu Altinok
a7d7e80adb
EntityRuler improve disk load error message (#9658)
* added error string

* added serialization test

* added more to if statements

* wrote file to tempdir

* added tempdir

* changed parameter a bit

* Update spacy/tests/pipeline/test_entity_ruler.py

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2021-11-23 16:26:05 +01:00
Adriane Boyd
9ac6d4991e
Add doc_cleaner component (#9659)
* Add doc_cleaner component

* Fix types

* Fix loop

* Rephrase method description
2021-11-23 15:33:33 +01:00
Adriane Boyd
a77f50baa4
Allow Scorer.score_spans to handle pred docs with missing annotation (#9701)
If the predicted docs are missing annotation according to
`has_annotation`, treat the docs as having no predictions rather than
raising errors when the annotation is missing.

The motivation for this is a combined tokenization+sents scorer for a
component where the sents annotation is optional. To provide a single
scorer in the component factory, it needs to be possible for the scorer
to continue despite missing sents annotation in the case where the
component is not annotating sents.
2021-11-23 15:17:19 +01:00
Adriane Boyd
36c7047946
Use reference parse to initialize parser moves (#9722) 2021-11-23 14:55:55 +01:00
Adriane Boyd
0e93b315f3
Convert labels to strings for README in package CLI (#9694) 2021-11-19 08:51:46 +01:00
Adriane Boyd
ea450d652c
Exclude strings from v3.2+ source vector checks (#9697)
Exclude strings from `Vector.to_bytes()` comparions for v3.2+ `Vectors`
that now include the string store so that the source vector comparison
is only comparing the vectors and not the strings.
2021-11-19 08:51:19 +01:00
Paul O'Leary McCann
f3981bd0c8
Clarify how to fill in init_tok2vec after pretraining (#9639)
* Clarify how to fill in init_tok2vec after pretraining

* Ignore init_tok2vec arg in pretraining

* Update docs, config setting

* Remove obsolete note about not filling init_tok2vec early

This seems to have also caught some lines that needed cleanup.
2021-11-18 15:38:30 +01:00
Adriane Boyd
c9baf9d196
Fix spancat for empty docs and zero suggestions (#9654)
* Fix spancat for empty docs and zero suggestions

* Use ops.xp.zeros in test
2021-11-15 12:40:55 +01:00
github-actions[bot]
67d8c8a081
Auto-format code with black (#9664)
Co-authored-by: explosion-bot <explosion-bot@users.noreply.github.com>
2021-11-12 10:00:03 +01:00
Sofie Van Landeghem
24cdd4c88e
Merge pull request #9638 from polm/fix/optional-pretrain-path
Make Jsonl Corpus reader path optional again
2021-11-09 10:45:14 +01:00
Paul O'Leary McCann
8aa2d32ca9 Update jsonlcorpus constructor types 2021-11-09 16:20:19 +09:00
Paul O'Leary McCann
71fb00ed95
Update spacy/training/corpus.py
Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2021-11-08 10:02:29 +00:00
Sofie Van Landeghem
c97f29c593
Merge pull request #9629 from ljvmiranda921/chore/migrate-regressions
Migrate regression and other tests to the new pytest marker
2021-11-08 09:07:38 +01:00
Paul O'Leary McCann
141f12b92e Make Jsonl Corpus reader optional again 2021-11-07 18:56:23 +09:00
Lj Miranda
909177589d Remove utility script 2021-11-06 06:35:58 +08:00
Adriane Boyd
0fc3dee772
Merge pull request #9596 from adrianeboyd/tests/reenable-v3.2.0-tests
Reenable tests for v3.2.0
2021-11-05 10:54:30 +01:00
github-actions[bot]
5cdb7eb5c2
Auto-format code with black (#9631)
Co-authored-by: explosion-bot <explosion-bot@users.noreply.github.com>
Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2021-11-05 09:58:36 +01:00
Adriane Boyd
e6f91b6f27
Format (#9630) 2021-11-05 09:56:26 +01:00