Commit Graph

5216 Commits

Author SHA1 Message Date
Matthew Honnibal
01c4e13b02 Update test 2018-05-07 16:59:52 +02:00
Matthew Honnibal
f6cdafc00e Fix refactored parser 2018-05-07 16:59:38 +02:00
Matthew Honnibal
f56bd4736b Improve dynamic oracle when values are missing in parse 2018-05-07 15:53:18 +02:00
Matthew Honnibal
eddc0e0c74 Set gold.sent_starts in ud_train 2018-05-07 15:52:47 +02:00
Matthew Honnibal
bf19f22340 Allow gold.sent_starts to be set from Python 2018-05-07 15:51:34 +02:00
Matthew Honnibal
7f163442e6 Work on refactoring greedy parser 2018-05-07 15:45:52 +02:00
Douglas Knox
9b49a40f4e Test and fix for Issue #2219 (#2272)
Test and fix for Issue #2219: Token.similarity() failed if single letter
2018-05-03 18:40:46 +02:00
Paul O'Leary McCann
bd72fbf09c Port Japanese mecab tokenizer from v1 (#2036)
* Port Japanese mecab tokenizer from v1

This brings the Mecab-based Japanese tokenization introduced in #1246 to
spaCy v2. There isn't a JapaneseTagger implementation yet, but POS tag
information from Mecab is stored in a token extension. A tag map is also
included.

As a reminder, Mecab is required because Universal Dependencies are
based on Unidic tags, and Janome doesn't support Unidic.

Things to check:

1. Is this the right way to use a token extension?

2. What's the right way to implement a JapaneseTagger? The approach in
 #1246 relied on `tag_from_strings` which is just gone now. I guess the
best thing is to just try training spaCy's default Tagger?

-POLM

* Add tagging/make_doc and tests
2018-05-03 18:38:26 +02:00
G.Pruvost
cc8e804648 #2211 - Support for ssl certs config on download command (#2212)
* Add support for SSL/Certs customization on download CLI

* Add a note on SSL options for the 'download' CLI in the README

* Add contributor agreement
2018-05-03 18:37:02 +02:00
Jens Dahl Møllerhøj
b9290397fb rename SP to _SP (#2289) 2018-05-03 18:33:49 +02:00
Matthew Honnibal
a8e70a4187 Merge branch 'develop' of https://github.com/explosion/spaCy into develop 2018-05-03 14:02:10 +02:00
Matthew Honnibal
c0e596283b Set version to 2.1.0a0 2018-05-03 14:00:11 +02:00
Matthew Honnibal
8cd06cc763 Try to fix root-outside-sentence bug 2018-05-02 14:39:48 +00:00
Matthew Honnibal
acebd01033 Set cildren from heads in finalize doc 2018-05-02 14:19:22 +00:00
Matthew Honnibal
569440a6db Dont normalize gradient by batch size 2018-05-02 08:42:10 +02:00
Matthew Honnibal
281e29cbcd Merge branch 'develop' of https://github.com/explosion/spaCy into develop 2018-05-02 01:36:23 +00:00
Matthew Honnibal
2338e8c7fc Update develop from master 2018-05-02 01:36:12 +00:00
Matthew Honnibal
9d147e12c4 Merge remote-tracking branch 'origin/master' into develop 2018-05-01 18:18:51 +02:00
Matthew Honnibal
6d0fe67b72 Constrain subtok label to adjacent tokens 2018-05-01 17:34:27 +02:00
Matthew Honnibal
8f21953fc5 Constrain subtok to adjacent words 2018-05-01 17:29:00 +02:00
Matthew Honnibal
b43bfd3524 Fix arc-eager oracle tests 2018-05-01 16:16:14 +02:00
Matthew Honnibal
31ed64e9b0 Fix textcat test 2018-05-01 15:18:39 +02:00
Matthew Honnibal
548bdff943 Update default Adam settings 2018-05-01 15:18:20 +02:00
Matthew Honnibal
adbb1f7533 Add better arc-eager oracle tests 2018-05-01 15:14:55 +02:00
Matthew Honnibal
697bcaa34f Add some methods to ArcEager that make testing easier 2018-05-01 15:13:14 +02:00
Mr Roboto
6f5ccda19c Addresses Issue #2228 - Deserialization fails when using tensor=False or sentiment=False (#2230)
* Fixes issue #2228

* Adds a new contributor
2018-05-01 13:40:22 +02:00
Matthew Honnibal
d44bb45c72 Fix scoring if tokenization changes 2018-05-01 01:33:20 +02:00
Matthew Honnibal
2b26c007cd Revert "Disable batch size compounding in ud-train"
This reverts commit 8a120fb455.
2018-04-29 14:09:02 +00:00
Matthew Honnibal
723b328062 Add script to run UD test 2018-04-29 15:50:25 +02:00
Matthew Honnibal
17af6aa3a4 Update ud_train script 2018-04-29 15:49:32 +02:00
Matthew Honnibal
5de8a36537 Fix arc_eager is_nonproj_tree 2018-04-29 15:49:11 +02:00
Matthew Honnibal
5260268f70 Fix textcat after merge 2018-04-29 15:48:53 +02:00
Matthew Honnibal
ad3d56c3ba Fix compile error in matcher 2018-04-29 15:48:34 +02:00
Matthew Honnibal
a8bc947fd4 Fix Token.set_extension 2018-04-29 15:48:19 +02:00
Matthew Honnibal
2c4a6d66fa Merge master into develop. Big merge, many conflicts -- need to review 2018-04-29 14:49:26 +02:00
ines
3c80f69ff5 Return data in cli.info and add silent option (resolves #2196) 2018-04-29 01:59:44 +02:00
ines
1c6d77610c Add remove_extension method on Doc, Token and Span (closes #2242) 2018-04-28 23:33:09 +02:00
ines
abdb853ebf Simplify underscore tests 2018-04-28 23:30:33 +02:00
ines
6fb6371670 Add collapse_phrases option to displacy (closes #2266) 2018-04-28 23:06:50 +02:00
Robin Linderborg
1f9904ef12 fixes #2238 (#2241)
* Remove erroneous lemma lookup år > åra in Swedish

* Add contributors agreement

* Add contrib agreement to correct directory

* Revert change to CONTRIBUTOR_AGREEMENT
2018-04-28 14:55:22 +02:00
Robin Linderborg
d01f503b54 Remove incorrect lemma lookup gäng->gänga (#2252)
* Remove incorrect lemma lookup gäng->gänga
In modern Swedish, "gäng" is mostly associated with "gang" or "group of people". The removed lemma lookup lemmatized it to the verb "thread".

* Add contrib agreement to correct directory

* Revert change to CONTRIBUTOR_AGREEMENT
2018-04-28 14:54:41 +02:00
Suraj Krishnan Rajan
69d041148f Implement Fast-Text vectors with subword features 2018-04-21 01:34:14 +05:30
ines
686225eadd Fix Spanish noun_chunks (resolves #2210)
Make sure 'NP' label is added to StringStore and move noun_bounds helper into a closure to allow reusing label sets
2018-04-18 18:44:01 -04:00
ines
9632595fb4 Use correct, non-deprecated merge syntax (resolves #2226) 2018-04-18 18:28:28 -04:00
Suraj Rajan
5957f15227 Fixed typos for #2222,#2223 (#2233) (closes #2222, closes #2223) 2018-04-18 14:55:26 -07:00
Matthew Honnibal
97851d2c4e Increment version to v2.0.12.dev0 2018-04-10 22:20:16 +02:00
Matthew Honnibal
ed39c75a92 Merge branch 'master' of https://github.com/explosion/spaCy 2018-04-10 22:19:40 +02:00
Matthew Honnibal
3836199a83 Fix loading of models when custom vectors are added 2018-04-10 22:19:20 +02:00
ines
0299d5fac8 Update argument annotations and formatting 2018-04-10 21:45:11 +02:00
ines
49b1e48bf5 Fix syntax error 2018-04-10 21:44:59 +02:00
ines
70052e46e9 Fix formatting [ci skip] 2018-04-10 21:42:46 +02:00
Matthew Honnibal
0ddb152be0 Improve error message when reading vectors 2018-04-10 21:26:50 +02:00
Matthew Honnibal
db50ac524e Support zipped vector files in init-model 2018-04-10 21:21:00 +02:00
ines
270fcfd925 Fix typo in package command message (closes #2200) 2018-04-10 19:14:31 +02:00
ines
24d8bf348d Revert "Add support for .zip to init_model"
This reverts commit 7ee880a0ad.
2018-04-10 19:08:06 +02:00
Matthew Honnibal
7ee880a0ad Add support for .zip to init_model 2018-04-10 14:30:04 +00:00
ines
5ecb274764 Fix indentation error and set Doc.is_tagged correctly 2018-04-10 16:14:52 +02:00
ines
987ee27af7 Return Doc if noun chunks merger component if Doc is not parsed 2018-04-09 14:51:02 +02:00
Xiaoquan Kong
e2f13ec722 bugfix: Doc.noun_chunks call Doc.noun_chunks_iterator without checking (closes #2194) 2018-04-08 23:44:05 +02:00
Jens Dahl Møllerhøj
e5055e3cf6 Add Danish lemmatizer (#2184)
* add danish lemmatizer

* fill contributor agreement
2018-04-07 19:07:28 +02:00
ines
bccbf538ef Revert "Check if spaCy has compiled correctly and show error message"
This reverts commit 3463ded7cf.
2018-04-06 15:49:44 +02:00
ines
fb4eda6616 Merge branch 'master' of https://github.com/explosion/spaCy 2018-04-06 00:38:48 +02:00
Matthew Honnibal
0c7fab4443 Set version to 2.0.11 2018-04-04 11:19:11 +02:00
Matthew Honnibal
a350be0601 Fix vector-name loading fix 2018-04-04 01:31:25 +02:00
Matthew Honnibal
21047bde52 Fix syntax error in italian lemmatizer 2018-04-03 23:13:22 +02:00
Matthew Honnibal
81f4005f3d Fix loading models with pretrained vectors 2018-04-03 23:11:48 +02:00
ines
3463ded7cf Check if spaCy has compiled correctly and show error message 2018-04-03 22:18:47 +02:00
Matthew Honnibal
96b612873b Add hyper-parameter to control whether parser makes a beam update 2018-04-03 22:02:56 +02:00
ines
e5f47cd82d Update errors 2018-04-03 21:40:29 +02:00
Matthew Honnibal
f7e6313b43 Increment version to v2.0.11.dev0 2018-04-03 20:58:47 +02:00
ines
10462816bc Fix tests for Python 2 2018-04-03 18:51:31 +02:00
ines
62b4b527d7 Don't raise error if set_extension has getter and setter (closes #2177)
Improve error messages, raise error if setter is specified without a getter and compare against _unset to allow default=None. Also add more tests.
2018-04-03 18:30:17 +02:00
ines
ee3082ad29 Fix whitespace 2018-04-03 18:29:53 +02:00
Ines Montani
3141e04822
💫 New system for error messages and warnings (#2163)
* Add spacy.errors module

* Update deprecation and user warnings

* Replace errors and asserts with new error message system

* Remove redundant asserts

* Fix whitespace

* Add messages for print/util.prints statements

* Fix typo

* Fix typos

* Move CLI messages to spacy.cli._messages

* Add decorator to display error code with message

An implementation like this is nice because it only modifies the string when it's retrieved from the containing class – so we don't have to worry about manipulating tracebacks etc.

* Remove unused link in spacy.about

* Update errors for invalid pipeline components

* Improve error for unknown factories

* Add displaCy warnings

* Update formatting consistency

* Move error message to spacy.errors

* Update errors and check if doc returned by component is None
2018-04-03 15:50:31 +02:00
Matthew Honnibal
abf8b16d71
Add doc.retokenize() context manager (#2172)
This patch takes a step towards #1487 by introducing the
doc.retokenize() context manager, to handle merging spans, and soon
splitting tokens.

The idea is to do merging and splitting like this:

with doc.retokenize() as retokenizer:
    for start, end, label in matches:
        retokenizer.merge(doc[start : end], attrs={'ent_type': label})

The retokenizer accumulates the merge requests, and applies them
together at the end of the block. This will allow retokenization to be
more efficient, and much less error prone.

A retokenizer.split() function will then be added, to handle splitting a
single token into multiple tokens. These methods take `Span` and `Token`
objects; if the user wants to go directly from offsets, they can append
to the .merges and .splits lists on the retokenizer.

The doc.merge() method's behaviour remains unchanged, so this patch
should be 100% backwards incompatible (modulo bugs). Internally,
doc.merge() fixes up the arguments (to handle the various deprecated styles),
opens the retokenizer, and makes the single merge.

We can later start making deprecation warnings on direct calls to doc.merge(),
to migrate people to use of the retokenize context manager.
2018-04-03 14:10:35 +02:00
Matthew Honnibal
8a120fb455 Disable batch size compounding in ud-train 2018-04-01 08:45:00 +00:00
Matthew Honnibal
98165e43a7 Sometimes update beam with greedy oracle 2018-04-01 08:44:35 +00:00
Suraj Rajan
1cdbb7c97c [2032] - Changed python set to cpp stl set (#2170)
Changed python set to cpp stl set #2032 

## Description

Changed python set to cpp stl set. CPP stl set works better due to the logarithmic run time of its methods. Finding minimum in the cpp set is done in constant time as opposed to the worst case linear runtime of python set. Operations such as find,count,insert,delete are also done in either constant and logarithmic time thus making cpp set a better option to manage vectors.
Reference : http://www.cplusplus.com/reference/set/set/

### Types of change
Enhancement for `Vectors` for faster initialising of word vectors(fasttext)
2018-03-31 13:28:25 +02:00
Matthew Honnibal
f3b7c5e537 Fix syntax error 2018-03-29 21:50:32 +02:00
Matthew Honnibal
23afa6429f Add input length error, to address #1826 2018-03-29 21:45:26 +02:00
Ines Montani
a609a1ca29
Merge pull request #2152 from explosion/feature/tidy-up-dependencies
💫 Tidy up dependencies
2018-03-29 14:35:09 +02:00
Viet Trung Tran
ea2af94cd9 Add support for Vietnamese in spaCy by leveraging Pyvi, an external Vietnamese tokenizer (#2155)
* support for Vietnamese

* Contributor Agreement for adding Vietnamese support on spaCy
2018-03-29 12:19:51 +02:00
ines
e6979bdbbd Merge branch 'feature/tidy-up-dependencies' of https://github.com/explosion/spaCy into feature/tidy-up-dependencies 2018-03-29 00:19:37 +02:00
ines
83146458a2 Fix urllib for Python 3 2018-03-29 00:19:33 +02:00
Matthew Honnibal
8308bbc617 Get msgpack and msgpack_numpy via Thinc, to avoid potential version conflicts 2018-03-29 00:14:55 +02:00
Matthew Honnibal
b5098079d8 Fix error on urllib 2018-03-29 00:08:16 +02:00
Ines Montani
0de599b16b
Merge pull request #2159 from explosion/feature/fix-merged-entity-iob (resolves #1554, resolves #1752)
💫 Fix token.ent_iob after doc.merge(), and ensure consistency in doc.ents
2018-03-28 23:10:00 +02:00
Ines Montani
98e9cda677
Merge pull request #2158 from explosion/feature/fix-multiple-vectors (resolves #1660)
💫 Fix loading of multiple vector models
2018-03-28 23:08:24 +02:00
Matthew Honnibal
a7c5ae2beb Avoid forcing a name on empty vectors, and remove print statement 2018-03-28 21:08:58 +02:00
ines
3eb67bbe4b Allow entity types with dashes (resolves #1967) 2018-03-28 20:51:26 +02:00
Matthew Honnibal
cf5fcf0546 Update serialization test 2018-03-28 20:12:53 +02:00
Matthew Honnibal
4555e3e251 Dont assume pretrained_vectors cfg set in build_tagger 2018-03-28 20:12:45 +02:00
Matthew Honnibal
0b375d50c8 Fix ent_iob tags in doc.merge to avoid inconsistent sequences 2018-03-28 18:39:03 +02:00
Matthew Honnibal
95fa89c4b8 Update doc.ents test 2018-03-28 18:39:03 +02:00
Matthew Honnibal
e807f88410 Resolve merge when cherry-picking ent iob patches from develop 2018-03-28 18:38:13 +02:00
Matthew Honnibal
99fbc7db33 Improve error message when entity sequence is inconsistent 2018-03-28 18:36:53 +02:00
Matthew Honnibal
cbd2794be0 Add test for ent_iob during span merge 2018-03-28 18:36:53 +02:00
Matthew Honnibal
f8dd905a24 Warn and fallback if vectors have no name 2018-03-28 18:24:53 +02:00
Matthew Honnibal
fd9e259414 Add test for #1660 2018-03-28 18:22:51 +02:00
Matthew Honnibal
bc4afa9881 Remove print statement 2018-03-28 17:48:37 +02:00
Matthew Honnibal
79dc241caa Set pretrained_vectors in parser cfg 2018-03-28 17:35:07 +02:00
Matthew Honnibal
17c3e7efa2 Add message noting vectors 2018-03-28 16:33:43 +02:00
Matthew Honnibal
9bf6e93b3e Set pretrained_vectors in begin_training 2018-03-28 16:32:41 +02:00
Matthew Honnibal
95a9615221 Fix loading of multiple pre-trained vectors
This patch addresses #1660, which was caused by keying all pre-trained
vectors with the same ID when telling Thinc how to refer to them. This
meant that if multiple models were loaded that had pre-trained vectors,
errors or incorrect behaviour resulted.

The vectors class now includes a .name attribute, which defaults to:
{nlp.meta['lang']_nlp.meta['name']}.vectors
The vectors name is set in the cfg of the pipeline components under the
key pretrained_vectors. This replaces the previous cfg key
pretrained_dims.

In order to make existing models compatible with this change, we check
for the pretrained_dims key when loading models in from_disk and
from_bytes, and add the cfg key pretrained_vectors if we find it.
2018-03-28 16:02:59 +02:00
ines
7fbc9e5874 Replace requests with urllib 2018-03-28 12:46:07 +02:00
ines
da1f200362 Add compat helpers for urllib 2018-03-28 12:45:53 +02:00
ines
ac88c72c9a Fix ftfy workaround and remove old import 2018-03-28 12:14:28 +02:00
ines
ce6071ca89 Remove ftfy dependency and update docs 2018-03-28 12:09:42 +02:00
Matthew Honnibal
070b6c6495 Remove dependency on ftfy 2018-03-28 12:07:02 +02:00
ines
6d2c85f428 Drop six and related hacks as a dependency 2018-03-28 10:45:25 +02:00
ines
9e83513004 Add position of invalid token to error message 2018-03-27 23:56:59 +02:00
ines
11c4735ccf Fix issue in Italian lemmatizer data (resolves #2050) 2018-03-27 23:55:22 +02:00
Matthew Honnibal
6a961928b2 Merge branch 'develop' of https://github.com/explosion/spaCy into develop 2018-03-27 21:01:48 +00:00
Matthew Honnibal
b7136cb094 Support zipped vector files in init-model 2018-03-27 21:01:18 +00:00
ines
693971dd8f Improve error message if token text is empty string (see #2101) 2018-03-27 22:25:40 +02:00
ines
0c829e6605 Fix whitespace 2018-03-27 22:20:59 +02:00
Matthew Honnibal
de9fd091ac Fix #2014: token.pos_ not writeable 2018-03-27 21:21:11 +02:00
Matthew Honnibal
18da89e04c Handle non-callable gold_tuples in parser begin_training 2018-03-27 21:08:41 +02:00
Matthew Honnibal
1f7229f40f Revert "Merge branch 'develop' of https://github.com/explosion/spaCy into develop"
This reverts commit c9ba3d3c2d, reversing
changes made to 92c26a35d4.
2018-03-27 19:23:02 +02:00
Matthew Honnibal
8b7a74570f Revert "Revert "Merge branch 'develop' of https://github.com/explosion/spaCy into develop""
This reverts commit f41e626844.
2018-03-27 19:22:52 +02:00
Matthew Honnibal
f41e626844 Revert "Merge branch 'develop' of https://github.com/explosion/spaCy into develop"
This reverts commit c9ba3d3c2d, reversing
changes made to f57bfbccdc.
2018-03-27 19:22:25 +02:00
Matthew Honnibal
c9ba3d3c2d Merge branch 'develop' of https://github.com/explosion/spaCy into develop 2018-03-27 18:59:08 +02:00
Matthew Honnibal
92c26a35d4 Update get_cuda_stream 2018-03-27 16:42:00 +00:00
Matthew Honnibal
f57bfbccdc Fix non-projective label filtering 2018-03-27 13:41:33 +02:00
Matthew Honnibal
d2118792e7 Merge changes from master 2018-03-27 13:38:41 +02:00
Matthew Honnibal
d4680e4d83 Merge branch 'master' of https://github.com/explosion/spaCy 2018-03-27 13:36:37 +02:00
Matthew Honnibal
63a267b34d Fix #2073: Token.set_extension not working 2018-03-27 13:36:20 +02:00
Matthew Honnibal
25280b7013 Try to make sum_state_features faster 2018-03-27 10:08:38 +00:00
Matthew Honnibal
987e1533a4 Use 8 features in parser 2018-03-27 10:08:12 +00:00
Matthew Honnibal
8bbd26579c Support GPU in UD training script 2018-03-27 09:53:35 +00:00
Matthew Honnibal
dd54511c4f Pass data as a function in begin_training methods 2018-03-27 09:39:59 +00:00
Matthew Honnibal
d9ebd78e11 Change default sizes in parser 2018-03-26 17:22:18 +02:00
Matthew Honnibal
a3d0cb15d3 Fix ent_iob tags in doc.merge to avoid inconsistent sequences 2018-03-26 07:16:06 +02:00
Matthew Honnibal
7d4687162f Update doc.ents test 2018-03-26 07:14:35 +02:00
Matthew Honnibal
514d89a3ae Set missing label for non-specified entities when setting doc.ents 2018-03-26 07:14:16 +02:00
Matthew Honnibal
54d7a1c916 Improve error message when entity sequence is inconsistent 2018-03-26 07:13:34 +02:00
Matthew Honnibal
938436455a Add test for ent_iob during span merge 2018-03-25 22:16:19 +02:00
Matthew Honnibal
8e08c378fe Fix entity IOB and tag in span merging 2018-03-25 22:16:01 +02:00
Matthew Honnibal
5430c43298 Set about to spacy-nightly 2018-03-25 19:30:14 +02:00
Ines Montani
68226109f4
Merge pull request #2142 from jimregan/polish-more-tokens
more exceptions
2018-03-24 19:06:44 +01:00
Matthew Honnibal
d566e673bf Set version to v2.0.10 2018-03-24 18:09:03 +01:00
Matthew Honnibal
0d3bf0d4eb Merge branch 'master' of https://github.com/explosion/spaCy 2018-03-24 17:31:49 +01:00
dejanmarich
ccd1c04c63 Update stop_words.py
Added more words
2018-03-24 17:31:24 +01:00
ines
f1446b0257 Port over Turkish changes 2018-03-24 17:31:07 +01:00
DuyguA
cd604878a4 quick typo fix 2018-03-24 17:26:35 +01:00
Matthew Honnibal
406548b976 Support .gz and .tar.gz files in spacy init-model 2018-03-24 17:18:32 +01:00
Jim O'Regan
efe037e8be more exceptions 2018-03-24 00:05:27 +00:00
Ines Montani
719037cf20
Update formatting and add missing commas 2018-03-23 22:18:20 +01:00
Otto Sulin
266efc2018 Added Finnish examples 2018-03-23 22:58:52 +02:00
Otto Sulin
1940e54602 Added Finnish numbers 2018-03-23 22:33:08 +02:00
Otto Sulin
4ec3f19e2b fixed stop words -> to-do lex_attrs.py 2018-03-23 22:18:17 +02:00
Matthew Honnibal
85717f570c Merge branch 'master' of https://github.com/explosion/spaCy 2018-03-23 20:30:42 +01:00
Matthew Honnibal
8902754f0b Fix vector loading for ud_train 2018-03-23 20:30:00 +01:00
Xiaoquan Kong
a71b99d7ff bugfix for global-variable-change-in-runtime related issue (#2135)
* Bugfix: setting pollution from spacy/cli/ud_train.py to whole package

* Add contributor agreement of howl-anderson
2018-03-23 11:36:38 +01:00
Matthew Honnibal
044397e269 Support .gz and .tar.gz files in spacy init-model 2018-03-21 14:33:23 +01:00
Matthew Honnibal
49fbe2dfee Use thinc.openblas in spacy.syntax.nn_parser 2018-03-20 02:22:09 +01:00
DuyguA
f708d7443b added contractions to stopwords #2020 2018-03-19 14:06:39 +01:00
Matthew Honnibal
bede11b67c
Improve label management in parser and NER (#2108)
This patch does a few smallish things that tighten up the training workflow a little, and allow memory use during training to be reduced by letting the GoldCorpus stream data properly.

Previously, the parser and entity recognizer read and saved labels as lists, with extra labels noted separately. Lists were used becaue ordering is very important, to ensure that the label-to-class mapping is stable.

We now manage labels as nested dictionaries, first keyed by the action, and then keyed by the label. Values are frequencies. The trick is, how do we save new labels? We need to make sure we iterate over these in the same order they're added. Otherwise, we'll get different class IDs, and the model's predictions won't make sense.

To allow stable sorting, we map the new labels to negative values. If we have two new labels, they'll be noted as having "frequency" -1 and -2. The next new label will then have "frequency" -3. When we sort by (frequency, label), we then get a stable sort.

Storing frequencies then allows us to make the next nice improvement. Previously we had to iterate over the whole training set, to pre-process it for the deprojectivisation. This led to storing the whole training set in memory. This was most of the required memory during training.

To prevent this, we now store the frequencies as we stream in the data, and deprojectivize as we go. Once we've built the frequencies, we can then apply a frequency cut-off when we decide how many classes to make.

Finally, to allow proper data streaming, we also have to have some way of shuffling the iterator. This is awkward if the training files have multiple documents in them. To solve this, the GoldCorpus class now writes the training data to disk in msgpack files, one per document. We can then shuffle the data by shuffling the paths.

This is a squash merge, as I made a lot of very small commits. Individual commit messages below.

* Simplify label management for TransitionSystem and its subclasses

* Fix serialization for new label handling format in parser

* Simplify and improve GoldCorpus class. Reduce memory use, write to temp dir

* Set actions in transition system

* Require thinc 6.11.1.dev4

* Fix error in parser init

* Add unicode declaration

* Fix unicode declaration

* Update textcat test

* Try to get model training on less memory

* Print json loc for now

* Try rapidjson to reduce memory use

* Remove rapidjson requirement

* Try rapidjson for reduced mem usage

* Handle None heads when projectivising

* Stream json docs

* Fix train script

* Handle projectivity in GoldParse

* Fix projectivity handling

* Add minibatch_by_words util from ud_train

* Minibatch by number of words in spacy.cli.train

* Move minibatch_by_words util to spacy.util

* Fix label handling

* More hacking at label management in parser

* Fix encoding in msgpack serialization in GoldParse

* Adjust batch sizes in parser training

* Fix minibatch_by_words

* Add merge_subtokens function to pipeline.pyx

* Register merge_subtokens factory

* Restore use of msgpack tmp directory

* Use minibatch-by-words in train

* Handle retokenization in scorer

* Change back-off approach for missing labels. Use 'dep' label

* Update NER for new label management

* Set NER tags for over-segmented words

* Fix label alignment in gold

* Fix label back-off for infrequent labels

* Fix int type in labels dict key

* Fix int type in labels dict key

* Update feature definition for 8 feature set

* Update ud-train script for new label stuff

* Fix json streamer

* Print the line number if conll eval fails

* Update children and sentence boundaries after deprojectivisation

* Export set_children_from_heads from doc.pxd

* Render parses during UD training

* Remove print statement

* Require thinc 6.11.1.dev6. Try adding wheel as install_requires

* Set different dev version, to flush pip cache

* Update thinc version

* Update GoldCorpus docs

* Remove print statements

* Fix formatting and links [ci skip]
2018-03-19 02:58:08 +01:00
Matthew Honnibal
ff42b726c1 Fix unicode declaration on test 2018-03-19 02:04:24 +01:00
Matthew Honnibal
7dc76c6ff6 Add test for textcat 2018-03-16 12:39:45 +01:00
Matthew Honnibal
3cdee79a0c Add depth argument for text classifier 2018-03-16 12:37:31 +01:00
Matthew Honnibal
13067095a1 Disable broken add-after-train in textcat 2018-03-16 12:33:33 +01:00
Matthew Honnibal
565ef8c4d8 Improve argument passing in textcat 2018-03-16 12:30:51 +01:00
Matthew Honnibal
eb2a3c5971 Remove unused function 2018-03-16 12:30:33 +01:00
Matthew Honnibal
307d6bf6d3 Fix parser for Thinc 6.11 2018-03-16 10:59:31 +01:00
Matthew Honnibal
9a389c4490 Fix parser for Thinc 6.11 2018-03-16 10:38:13 +01:00
Matthew Honnibal
648532d647 Don't assume blas methods are present 2018-03-16 02:48:20 +01:00
Matthew Honnibal
e85dd038fe Merge remote-tracking branch 'origin/master' into feature/single-thread 2018-03-16 02:41:11 +01:00
Matthew Honnibal
e3be3d65b3 Version as v2.0.10.dev0 2018-03-15 17:31:22 +01:00
ines
f3f8bfc367 Add built-in factories for merge_entities and merge_noun_chunks
Allows adding those components to the pipeline out-of-the-box if they're defined in a model's meta.json. Also allows usage as nlp.add_pipe(nlp.create_pipe('merge_entities')).
2018-03-15 17:16:54 +01:00
Ines Montani
0d17377e8b
Merge pull request #2095 from DuyguA/quick-typo-fix (resolves #2063)
Quick typo fix
2018-03-15 00:29:56 +01:00
ines
d854f69fe3 Add built-in factories for merge_entities and merge_noun_chunks
Allows adding those components to the pipeline out-of-the-box if they're defined in a model's meta.json. Also allows usage as nlp.add_pipe(nlp.create_pipe('merge_entities')).
2018-03-15 00:18:51 +01:00
ines
9ad5df41fe Fix whitespace 2018-03-15 00:11:18 +01:00
Matthew Honnibal
d7ce6527fb Use increasing batch sizes in ud-train 2018-03-14 20:15:28 +01:00
alldefector
f4e5904fc2 Fix Spanish noun_chunks failure caused by typo 2018-03-14 17:03:17 +01:00
Thomas Opsomer
fbf48b3f9f lemma property to return hash instead of unicode 2018-03-14 17:03:00 +01:00
Matthew Honnibal
8cefc58abc Fix Vectors pickling 2018-03-14 16:59:37 +01:00
DuyguA
be4f6da16b maybe not a good idea to remove also 2018-03-14 14:47:24 +01:00
DuyguA
1a513f71e3 removed also from lookup 2018-03-14 11:57:15 +01:00
DuyguA
cca66abf1e quick typo fix 2018-03-14 11:34:22 +01:00
Matthew Honnibal
7b755414eb Update call into thinc 2018-03-13 13:59:59 +01:00
Matthew Honnibal
e101f10ef0 Fix header 2018-03-13 02:12:16 +01:00
Matthew Honnibal
952c87409e Use openblas.sgemm in parser 2018-03-13 02:12:01 +01:00
Matthew Honnibal
d55620041b Switch parser to gemm from thinc.openblas 2018-03-13 02:10:58 +01:00
Matthew Honnibal
c2f4759257
Fix test for Python 2 2018-03-12 23:03:05 +01:00
Matthew Honnibal
9aeec9c242 Increment dev version 2018-03-11 01:58:21 +01:00
Matthew Honnibal
f49d71fa7c Merge branch 'master' of https://github.com/explosion/spaCy 2018-03-11 01:27:17 +01:00
Matthew Honnibal
5dddb30e5b Fix ud-train script 2018-03-11 01:26:45 +01:00
Matthew Honnibal
e42960bd14
Merge pull request #2012 from alldefector/patch-1
Fix Spanish noun_chunks failure caused by typo
2018-03-11 01:05:19 +01:00
Matthew Honnibal
2cab4d6517 Remove use of attr module in ud_train 2018-03-11 00:59:39 +01:00
Matthew Honnibal
fa9fd21620 Increment dev version 2018-03-11 00:41:54 +01:00
Matthew Honnibal
53b3249e06 Add tests for arc eager oracle 2018-03-10 23:42:56 +01:00
Matthew Honnibal
754ea1b2f7 Link in spaCy CoNLL commands 2018-03-10 23:42:15 +01:00
Matthew Honnibal
3478ea76d1 Add ud_train and ud_evaluate CLI commands 2018-03-10 23:41:55 +01:00
Matthew Honnibal
4b72c38556 Fix dropout bug in beam parser 2018-03-10 23:16:40 +01:00
Matthew Honnibal
9cc202d670 Fix Vectors pickling 2018-03-10 22:53:42 +01:00
Matthew Honnibal
3d6487c734 Support dropout in beam parse 2018-03-10 22:41:55 +01:00
Matthew Honnibal
31b156d60b Fix itershuffle 2018-03-10 22:32:59 +01:00
Matthew Honnibal
b59765ca9f Stream gold during spacy train 2018-03-10 22:32:45 +01:00
Matthew Honnibal
c3d168509a Stream the gold data during training, to reduce memory 2018-03-10 22:32:32 +01:00