Commit Graph

15598 Commits

Author SHA1 Message Date
Paul O'Leary McCann
87adb32576
Merge pull request #10867 from freddyheppell/patch-1
Fix misspelt keyword in StringStore docs example
2022-05-30 14:22:19 +09:00
Freddy Heppell
322c5a3ac4
Fix misspelt keyword in StringStore example 2022-05-29 10:49:19 +01:00
Daniël de Kok
85dd2b6c04
Parser: use C saxpy/sgemm provided by the Ops implementation (#10773)
* Parser: use C saxpy/sgemm provided by the Ops implementation

This is a backport of https://github.com/explosion/spaCy/pull/10747
from the parser refactor branch. It eliminates the explicit calls
to BLIS, instead using the saxpy/sgemm provided by the Ops
implementation.

This allows us to use Accelerate in the parser on M1 Macs (with
an updated thinc-apple-ops).

Performance of the de_core_news_lg pipe:

BLIS 0.7.0, no thinc-apple-ops:  6385 WPS
BLIS 0.7.0, thinc-apple-ops:    36455 WPS
BLIS 0.9.0, no thinc-apple-ops: 19188 WPS
BLIS 0.9.0, thinc-apple-ops:    36682 WPS
This PR, thinc-apple-ops:       38726 WPS

Performance of the de_core_news_lg pipe (only tok2vec -> parser):

BLIS 0.7.0, no thinc-apple-ops: 13907 WPS
BLIS 0.7.0, thinc-apple-ops:    73172 WPS
BLIS 0.9.0, no thinc-apple-ops: 41576 WPS
BLIS 0.9.0, thinc-apple-ops:    72569 WPS
This PR, thinc-apple-ops:       87061 WPS

* Require thinc >=8.1.0,<8.2.0

* Lower thinc lowerbound to 8.1.0.dev0

* Use best CPU ops for CBLAS when the parser model is on the GPU

* Fix another unguarded cblas() call

* Fix: use ops as a shorthand for self.model.ops

Co-authored-by: Madeesh Kannan <shadeMe@users.noreply.github.com>

Co-authored-by: Madeesh Kannan <shadeMe@users.noreply.github.com>
2022-05-27 11:20:52 +02:00
github-actions[bot]
6172af8158
Auto-format code with black (#10857)
Co-authored-by: explosion-bot <explosion-bot@users.noreply.github.com>
2022-05-27 10:54:54 +02:00
Daniël de Kok
7c6a97559d Simplify GPU check
This change removes `thinc.util.has_cupy` from the GPU presence check.
Currently `gpu_is_available` already implies `has_cupy`.  We also want
to show this warning in the future when a machine has a non-CuPy GPU.
2022-05-25 14:06:45 +02:00
kadarakos
f6a4b80c0b
Better errors for has_annotation and Matcher (#10830)
* Show input argument instead of None

* catch invalid attr early

* moved error message from code to errors.py

* Update spacy/errors.py

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Update spacy/errors.py

* update E153 and E154

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2022-05-25 11:12:29 +02:00
Sofie Van Landeghem
83ed1f391b
Remove NBSP's across tables in the docs (#10842) 2022-05-25 09:48:39 +02:00
Richard Hudson
32954c3bcb
Fix issues for Mypy 0.950 and Pydantic 1.9.0 (#10786)
* Make changes to typing

* Correction

* Format with black

* Corrections based on review

* Bumped Thinc dependency version

* Bumped blis requirement

* Correction for older Python versions

* Update spacy/ml/models/textcat.py

Co-authored-by: Daniël de Kok <me@github.danieldk.eu>

* Corrections based on review feedback

* Readd deleted docstring line

Co-authored-by: Daniël de Kok <me@github.danieldk.eu>
2022-05-25 09:33:54 +02:00
Paul O'Leary McCann
6be09bbd07
Fix Entity Linker with tokenization mismatches (fix #9575) (#10457)
* Add failing test

* Partial fix for issue

This kind of works. The issue with token length mismatches is gone. The
problem is that when you get empty lists of encodings to compare, it
fails because the sizes are not the same, even though they're both zero:
(0, 3) vs (0,). Not sure why that happens...

* Short circuit on empties

* Remove spurious check

The check here isn't needed now the the short circuit is fixed.

* Update spacy/tests/pipeline/test_entity_linker.py

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Use "eg", not "example"

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2022-05-23 20:42:26 +02:00
Lj Miranda
1d34aa2b3d
Add spacy-span-analyzer to debug data (#10668)
* Rename to spans_key for consistency

* Implement spans length in debug data

* Implement how span bounds and spans are obtained

In this commit, I implemented how span boundaries (the tokens) around a
given span and spans are obtained. I've put them in the compile_gold()
function so that it's accessible later on. I will do the actual
computation of the span and boundary distinctiveness in the main
function above.

* Compute for p_spans and p_bounds

* Add computation for SD and BD

* Fix mypy issues

* Add weighted average computation

* Fix compile_gold conditional logic

* Add test for frequency distribution computation

* Add tests for kl-divergence computation

* Fix weighted average computation

* Make tables more compact by rounding them

* Add more descriptive checks for spans

* Modularize span computation methods

In this commit, I added the _get_span_characteristics and
_print_span_characteristics functions so that they can be reusable
anywhere.

* Remove unnecessary arguments and make fxs more compact

* Update a few parameter arguments

* Add tests for print_span and get_span methods

* Update API to talk about span characteristics in brief

* Add better reporting of spans_length

* Add test for span length reporting

* Update formatting of span length report

Removed '' to indicate that it's not a string, then
sort the n-grams by their length, not by their frequency.

* Apply suggestions from code review

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Show all frequency distribution when -V

In this commit, I displayed the full frequency distribution of the
span lengths when --verbose is passed. To make things simpler, I
rewrote some of the formatter functions so that I can call them
whenever.

Another notable change is that instead of showing percentages as
Integers, I showed them as floats (max 2-decimal places). I did this
because it looks weird when it displays (0%).

* Update logic on how total is computed

The way the 90% thresholding is computed now is that we keep
adding the percentages until we reach >= 90%. I also updated the wording
and used the term "At least" to denote that >= 90% of your spans have
these distributions.

* Fix display when showing the threshold percentage

* Apply suggestions from code review

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Add better phrasing for span information

* Update spacy/cli/debug_data.py

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Add minor edits for whitespaces etc.

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2022-05-23 19:06:38 +02:00
Peter Baumgartner
7ce3460b23
add floret to static vectors docs (#10833) 2022-05-23 09:16:31 +02:00
kadarakos
a3814ee739
oov confusion fix (#10828) 2022-05-23 09:15:51 +02:00
Madeesh Kannan
4fb1809c72
Disable weekly GPU/slow tests on forks (#10831) 2022-05-20 15:46:30 +02:00
Adriane Boyd
a82ec56aae
Remove cuda extras for non-linux arm in install widget (#10796)
* Remove cuda extras for non-linux arm platforms in install widget
* Extend cuda versions install widget
* Update GPU install docs to clarify cuda
2022-05-20 09:57:41 +02:00
Paul O'Leary McCann
46982cf694
Add glossary entry for root (#10821)
* Add glossary entry for root

There was already one but it was lower case, maybe that should be
removed?

* remove lowercase root

On reflection, that was probably just a mistake.

* Add lowercase root back

It's harmless to leave it there.
2022-05-20 09:56:32 +02:00
Adriane Boyd
10b7223021
Merge pull request #10816 from danieldk/v4-merge-master-20220518
Merge `master` into `v4`
2022-05-20 09:56:06 +02:00
Daniël de Kok
5586fd9311 Merge remote-tracking branch 'upstream/master' into v4-merge-master-20220518 2022-05-18 11:34:54 +02:00
Raphael Mitsch
357be2614e
Fuzz tokenizer.explain: draft for fuzzy tests. (#10771)
* Fuzz tokenizer.explain: draft for fuzzy tests.

* Fuzz tokenizer.explain: xignoring tokenizer.explain() tests. Removed deadline modification. Removed LANGUAGES_WITHOUT_TOKENIZERS.

* Fuzz tokenizer.explain: changed tokenizer initialization to avoid failus in Azure runs.

* Fuzz tokenizer.explain: type hint for tokenizer in test.

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2022-05-17 10:23:16 +02:00
github-actions[bot]
99aeaf9bd3
Auto-format code with black (#10795)
Co-authored-by: explosion-bot <explosion-bot@users.noreply.github.com>
2022-05-13 19:02:08 +02:00
kadarakos
fd36469900
bugfix parser labels (#10797) 2022-05-13 11:41:32 +02:00
Paul O'Leary McCann
7634a488fe
Merge pull request #10793 from Schero1994/feature/update
Update spaCy Universe: spacytextblob (code example)
2022-05-13 12:07:37 +09:00
schaeran
f5952c0851 update spaCy Universe: spacytextblob (code example) 2022-05-12 18:23:00 +02:00
Patrick Düggelin
cb06309ed8
Fix PhraseMatcher remove overlapping terms (#10734)
* Add regression test for issue 10643

* Improve overlapping terms testcase

* Fix removing overlapping terms in phrase matcher (#10643)
2022-05-12 12:23:52 +02:00
Raphael Mitsch
6f9e2ca81f
Ignore overrides for pipe names in config argument (#10779)
* Pipe name override in config: added check with warning, added removal of name override from config, extended tests.

* Pipoe name override in config: added pytest UserWarning.

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2022-05-12 11:46:08 +02:00
Adriane Boyd
b65d652881
Override SpanGroups.setdefault to provide default SpanGroup (#10772)
* Fix mistake in SpanGroup API docs

* Restrict SpanGroups.setdefault to SpanGroup only

* Refactor to support default span iterable
2022-05-12 10:06:25 +02:00
Richard Hudson
d524f6415f
Add documentation tip about overriding variables (#10780) 2022-05-11 10:15:32 +02:00
Raphael Mitsch
2904359685
Allow assets to be optional in spacy project (#10714)
* Allow assets to be optional in spacy project: draft for optional flag/download_all options.

* Allow assets to be optional in spacy project: added OPTIONAL_DEFAULT reflecting default asset optionality.

* Allow assets to be optional in spacy project: renamed --all to --extra.

* Allow assets to be optional in spacy project: included optional flag in project config test.

* Allow assets to be optional in spacy project: added documentation.

* Allow assets to be optional in spacy project: fixing deprecated --all reference.

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Allow assets to be optional in spacy project: fixed project_assets() docstring.

* Allow assets to be optional in spacy project: adjusted wording in justification of optional assets.

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Allow assets to be optional in spacy project: switched to  as keyword in project.yml. Updated docs.

* Allow assets to be optional in spacy project: updated comment.

* Allow assets to be optional in spacy project: replacing 'optional' with 'extra' in output.

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Allow assets to be optional in spacy project: replacing 'optional' with 'extra' in docstring..

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Allow assets to be optional in spacy project: replacing 'optional' with 'extra' in test..

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Allow assets to be optional in spacy project: replacing 'optional' with 'extra' in test.

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Allow assets to be optional in spacy project: renamed OPTIONAL_DEFAULT to EXTRA_DEFAULT.

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2022-05-10 10:40:11 +02:00
Sofie Van Landeghem
1543558d08
Add test for old architectures (#10751)
* add v1 and v2 tests for tok2vec architectures

* textcat architectures are not "layers"

* test older textcat architectures

* test older parser architecture
2022-05-10 08:24:42 +02:00
Madeesh Kannan
733114bdd9
training.md: Fix typos (#10775) 2022-05-09 19:44:14 +02:00
Raphael Mitsch
e626df959f
Document different ways to create a pipeline (#10762)
* Document different ways to create a pipeline: moved up/slightly modified paragraph on pipeline creation.

* Document different ways to create a pipeline: changed Finnish to Ukrainian in example for language without trained pipeline.

* Document different ways to create a pipeline: added explanation of blank pipeline.

* Document different ways to create a pipeline: exchanged Ukrainian with Yoruba.
2022-05-06 15:40:59 +02:00
Richard Hudson
c32e1a0079
Updated Coreferee Universe entry (#10763) 2022-05-06 13:21:39 +02:00
Luca Dorigo
0a92d5644e
Fix StringStore.__getitem__ return type depending on parameter types (#10741)
* Fix StringStore.__getitem__ return type depending on parameter types

Small fix using  `@overload` so that `StringStore.__getitem__` returns an `int` when given a `str` or `bytes` and a `str` when given an `int`.

* Update spacy/strings.pyi

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2022-05-03 17:57:07 +02:00
Sofie Van Landeghem
e03b9f8095
Small doc typos (#10750)
* fix typos

* formatting
2022-05-03 13:55:27 +02:00
Raphael Mitsch
f5390e278a
Refactor error messages to remove hardcoded strings (#10729)
* Use custom error msg instead of hardcoded string: replaced remaining hardcoded error message strings.

* Use custom error msg instead of hardcoded string: fixing faulty Errors import.
2022-05-02 13:38:46 +02:00
Madeesh Kannan
0a503ce5e0
Remove vestigial debug print statement in walk_head_nodes (#10718)
* `graph`: Remove vestigial debug print statement in `walk_head_nodes`

* Revert whitespace changes

* Remove more debug print statements
2022-05-02 13:36:35 +02:00
vincent d warmerdam
f3de976513
Update universe.json to Include spaCy video #6 (#10723)
* Update universe.json

I noticed that episode 6 was missing, so I added it.

* Update universe.json

* Update universe.json
2022-05-02 13:35:14 +02:00
Adriane Boyd
497a708c71
Docs for v3.3 (#10628)
* Temporarily disable CI tests

* Start v3.3 website updates

* Add trainable lemmatizer to pipeline design

* Fix Vectors.most_similar

* Add floret vector info to pipeline design

* Add Lower and Upper Sorbian

* Add span to sidebar

* Work on release notes

* Copy from release notes

* Update pipeline design graphic

* Upgrading note about Doc.from_docs

* Add tables and details

* Update website/docs/models/index.md

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Fix da lemma acc

* Add minimal intro, various updates

* Round lemma acc

* Add section on floret / word lists

* Add new pipelines table, minor edits

* Fix displacy spans example title

* Clarify adding non-trainable lemmatizer

* Update adding-languages URLs

* Revert "Temporarily disable CI tests"

This reverts commit 1dee505920.

* Spell out words/sec

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2022-04-28 14:09:35 +02:00
Adriane Boyd
10377fb945
Set version to v3.3.0 (#10614)
* Set version to v3.3.0

* Revert "Temporarily skip tests that require models/compat"

This reverts commit e422101e00.
2022-04-28 13:07:49 +02:00
Raphael Mitsch
3579507ba1
Bumped black to 22.3.0 due to a fix for https://github.com/psf/black/issues/2964. (#10715) 2022-04-27 14:49:24 +02:00
harmbuisman
c066fb8a4e
#10672: fixes displacy output for manual unsorted entities (#10673)
* #10672: fixes displacy output for manual unsorted entities

* #10672: removed unused import

* fix prettier formatting

Co-authored-by: Harm Buisman <h.buisman@iknl.nl>
Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2022-04-27 09:51:58 +02:00
Sofie Van Landeghem
b3717ba53a
removing print statements from the test suite (#10712) 2022-04-27 09:14:25 +02:00
Adriane Boyd
455f089c9b
Support exclude in Doc.from_docs (#10689)
* Support exclude in Doc.from_docs

* Update API docs

* Add new tag to docs
2022-04-25 18:19:03 +02:00
Mike
3b208197c3
Fixed example for spacy_syllables (#10705)
There was a typo in the example for the spacy_syllables project.
2022-04-25 16:40:54 +02:00
github-actions[bot]
e07500369c
Auto-format code with black (#10687)
Co-authored-by: explosion-bot <explosion-bot@users.noreply.github.com>
2022-04-22 11:24:53 +02:00
Sofie Van Landeghem
2c2dbb844c Syntax for a branch from a PR 2022-04-22 09:45:49 +02:00
Ryn Daniels
29afbdb91e
add readme for explosion-bot (#10677) 2022-04-20 09:52:34 +02:00
Richard Hudson
4b227f4861
Merge pull request #10669 from mgrojo/develop
Fix some issues in Spanish stop-word list and examples
2022-04-19 09:37:34 +02:00
mgr
3d50b1a989 Fix some issues in Spanish examples
- Spelling: nationalities in lowercase, accent.
- Incorrect verb composition
- Untranslated word
2022-04-18 22:12:57 +02:00
mgr
2a2654c756 Remove significant or not very frequent words from stop word list [es]
The list of stop words for Spanish contained many inadequate words, see:

https://github.com/explosion/spaCy/issues/3052#issuecomment-1100760100

Removed words:
- verb forms of 'trabajar' (work) and intentar (try)
- words related to 'empleo' (employment)
- incorrect words: ampleamos, arribaabajo, soyos, paìs
- miscellaneous words due to being too significant of too infrequent:
  actualmente, aproximadamente, antaño, cosas, ejemplo, horas, general,
  pais, principalmente, raras

Added other stop words for completion:
- Spanish one-letter words
- numbers up to twelve

Some reformatting to 79 columns.

When in doubt, the English and German lists have been consulted as good
examples.
2022-04-18 22:04:02 +02:00
Madeesh Kannan
aa6780eb27
Matcher: Remove superfluous GIL-acquiring check in get_is_final (#10659)
* `Matcher`: Remove superfluous GIL-acquiring check in `get_is_final`

This check incurred a significant performance penalty due to  implict interactions between the GIL and Cython ref-counting code.

* `Matcher`: Inline `PatternStateC` accessors
2022-04-18 12:59:34 +02:00