* fix NEL config and IO, and n_sents functionality * add docs * fix test
19 KiB
title | tag | source | new | teaser | api_base_class | api_string_name | api_trainable |
---|---|---|---|---|---|---|---|
EntityLinker | class | spacy/pipeline/entity_linker.py | 2.2 | Pipeline component for named entity linking and disambiguation | /api/pipe | entity_linker | true |
An EntityLinker
component disambiguates textual mentions (tagged as named
entities) to unique identifiers, grounding the named entities into the "real
world". It requires a KnowledgeBase
, as well as a function to generate
plausible candidates from that KnowledgeBase
given a certain textual mention,
and a machine learning model to pick the right candidate, given the local
context of the mention.
Config and implementation
The default config is defined by the pipeline component factory and describes
how the component should be configured. You can override its settings via the
config
argument on nlp.add_pipe
or in your
config.cfg
for training. See the
model architectures documentation for details on the
architectures and their arguments and hyperparameters.
Example
from spacy.pipeline.entity_linker import DEFAULT_NEL_MODEL config = { "labels_discard": [], "n_sents": 0, "incl_prior": True, "incl_context": True, "model": DEFAULT_NEL_MODEL, "entity_vector_length": 64, "get_candidates": {'@misc': 'spacy.CandidateGenerator.v1'}, } nlp.add_pipe("entity_linker", config=config)
Setting | Description |
---|---|
labels_discard |
NER labels that will automatically get a "NIL" prediction. Defaults to [] . |
n_sents |
The number of neighbouring sentences to take into account. Defaults to 0. |
incl_prior |
Whether or not to include prior probabilities from the KB in the model. Defaults to True . |
incl_context |
Whether or not to include the local context in the model. Defaults to True . |
model |
The Model powering the pipeline component. Defaults to EntityLinker. |
entity_vector_length |
Size of encoding vectors in the KB. Defaults to 64 . |
get_candidates |
Function that generates plausible candidates for a given Span object. Defaults to CandidateGenerator, a function looking up exact, case-dependent aliases in the KB. |
%%GITHUB_SPACY/spacy/pipeline/entity_linker.py
EntityLinker.__init__
Example
# Construction via add_pipe with default model entity_linker = nlp.add_pipe("entity_linker") # Construction via add_pipe with custom model config = {"model": {"@architectures": "my_el.v1"}} entity_linker = nlp.add_pipe("entity_linker", config=config) # Construction from class from spacy.pipeline import EntityLinker entity_linker = EntityLinker(nlp.vocab, model)
Create a new pipeline instance. In your application, you would normally use a
shortcut for this and instantiate the component using its string name and
nlp.add_pipe
.
Upon construction of the entity linker component, an empty knowledge base is
constructed with the provided entity_vector_length
. If you want to use a
custom knowledge base, you should either call
set_kb
or provide a kb_loader
in the
initialize
call.
Name | Description |
---|---|
vocab |
The shared vocabulary. |
model |
The Model powering the pipeline component. |
name |
String name of the component instance. Used to add entries to the losses during training. |
keyword-only | |
entity_vector_length |
Size of encoding vectors in the KB. |
get_candidates |
Function that generates plausible candidates for a given Span object. |
labels_discard |
NER labels that will automatically get a "NIL" prediction. |
n_sents |
The number of neighbouring sentences to take into account. |
incl_prior |
Whether or not to include prior probabilities from the KB in the model. |
incl_context |
Whether or not to include the local context in the model. |
EntityLinker.__call__
Apply the pipe to one document. The document is modified in place and returned.
This usually happens under the hood when the nlp
object is called on a text
and all pipeline components are applied to the Doc
in order. Both
__call__
and pipe
delegate to the predict
and
set_annotations
methods.
Example
doc = nlp("This is a sentence.") entity_linker = nlp.add_pipe("entity_linker") # This usually happens under the hood processed = entity_linker(doc)
Name | Description |
---|---|
doc |
The document to process. |
RETURNS | The processed document. |
EntityLinker.pipe
Apply the pipe to a stream of documents. This usually happens under the hood
when the nlp
object is called on a text and all pipeline components are
applied to the Doc
in order. Both __call__
and
pipe
delegate to the
predict
and
set_annotations
methods.
Example
entity_linker = nlp.add_pipe("entity_linker") for doc in entity_linker.pipe(docs, batch_size=50): pass
Name | Description |
---|---|
stream |
A stream of documents. |
keyword-only | |
batch_size |
The number of documents to buffer. Defaults to 128 . |
YIELDS | The processed documents in order. |
EntityLinker.set_kb
The kb_loader
should be a function that takes a Vocab
instance and creates
the KnowledgeBase
, ensuring that the strings of the knowledge base are synced
with the current vocab.
Example
def create_kb(vocab): kb = KnowledgeBase(vocab, entity_vector_length=128) kb.add_entity(...) kb.add_alias(...) return kb entity_linker = nlp.add_pipe("entity_linker") entity_linker.set_kb(create_kb)
Name | Description |
---|---|
kb_loader |
Function that creates a KnowledgeBase from a Vocab instance. |
EntityLinker.initialize
Initialize the component for training. get_examples
should be a function that
returns an iterable of Example
objects. The data examples are
used to initialize the model of the component and can either be the full
training data or a representative sample. Initialization includes validating the
network,
inferring missing shapes and
setting up the label scheme based on the data. This method is typically called
by Language.initialize
.
Optionally, a kb_loader
argument may be specified to change the internal
knowledge base. This argument should be a function that takes a Vocab
instance
and creates the KnowledgeBase
, ensuring that the strings of the knowledge base
are synced with the current vocab.
This method was previously called begin_training
.
Example
entity_linker = nlp.add_pipe("entity_linker") entity_linker.initialize(lambda: [], nlp=nlp, kb_loader=my_kb)
Name | Description |
---|---|
get_examples |
Function that returns gold-standard annotations in the form of Example objects. |
keyword-only | |
nlp |
The current nlp object. Defaults to None . |
kb_loader |
Function that creates a KnowledgeBase from a Vocab instance. |
EntityLinker.predict
Apply the component's model to a batch of Doc
objects, without
modifying them. Returns the KB IDs for each entity in each doc, including NIL
if there is no prediction.
Example
entity_linker = nlp.add_pipe("entity_linker") kb_ids = entity_linker.predict([doc1, doc2])
Name | Description |
---|---|
docs |
The documents to predict. |
RETURNS | List[str] |
EntityLinker.set_annotations
Modify a batch of documents, using pre-computed entity IDs for a list of named entities.
Example
entity_linker = nlp.add_pipe("entity_linker") kb_ids = entity_linker.predict([doc1, doc2]) entity_linker.set_annotations([doc1, doc2], kb_ids)
Name | Description |
---|---|
docs |
The documents to modify. |
kb_ids |
The knowledge base identifiers for the entities in the docs, predicted by EntityLinker.predict . |
EntityLinker.update
Learn from a batch of Example
objects, updating both the
pipe's entity linking model and context encoder. Delegates to
predict
.
Example
entity_linker = nlp.add_pipe("entity_linker") optimizer = nlp.initialize() losses = entity_linker.update(examples, sgd=optimizer)
Name | Description |
---|---|
examples |
A batch of Example objects to learn from. |
keyword-only | |
drop |
The dropout rate. |
sgd |
An optimizer. Will be created via create_optimizer if not set. |
losses |
Optional record of the loss during training. Updated using the component name as the key. |
RETURNS | The updated losses dictionary. |
EntityLinker.score
Score a batch of examples.
Example
scores = entity_linker.score(examples)
Name | Description |
---|---|
examples |
The examples to score. |
RETURNS | The scores, produced by Scorer.score_links . |
EntityLinker.create_optimizer
Create an optimizer for the pipeline component.
Example
entity_linker = nlp.add_pipe("entity_linker") optimizer = entity_linker.create_optimizer()
Name | Description |
---|---|
RETURNS | The optimizer. |
EntityLinker.use_params
Modify the pipe's model, to use the given parameter values. At the end of the context, the original parameters are restored.
Example
entity_linker = nlp.add_pipe("entity_linker") with entity_linker.use_params(optimizer.averages): entity_linker.to_disk("/best_model")
Name | Description |
---|---|
params |
The parameter values to use in the model. |
EntityLinker.to_disk
Serialize the pipe to disk.
Example
entity_linker = nlp.add_pipe("entity_linker") entity_linker.to_disk("/path/to/entity_linker")
Name | Description |
---|---|
path |
A path to a directory, which will be created if it doesn't exist. Paths may be either strings or Path -like objects. |
keyword-only | |
exclude |
String names of serialization fields to exclude. |
EntityLinker.from_disk
Load the pipe from disk. Modifies the object in place and returns it.
Example
entity_linker = nlp.add_pipe("entity_linker") entity_linker.from_disk("/path/to/entity_linker")
Name | Description |
---|---|
path |
A path to a directory. Paths may be either strings or Path -like objects. |
keyword-only | |
exclude |
String names of serialization fields to exclude. |
RETURNS | The modified EntityLinker object. |
Serialization fields
During serialization, spaCy will export several data fields used to restore
different aspects of the object. If needed, you can exclude them from
serialization by passing in the string names via the exclude
argument.
Example
data = entity_linker.to_disk("/path", exclude=["vocab"])
Name | Description |
---|---|
vocab |
The shared Vocab . |
cfg |
The config file. You usually don't want to exclude this. |
model |
The binary model data. You usually don't want to exclude this. |
kb |
The knowledge base. You usually don't want to exclude this. |