spaCy/website/docs/usage/layers-architectures.md
2020-09-02 10:46:38 +02:00

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Layers and Model Architectures Power spaCy components with custom neural networks
Type Signatures
type-sigs
Defining Sublayers
sublayers
PyTorch & TensorFlow
frameworks
Trainable Components
components
/usage/projects

A model architecture is a function that wires up a Thinc Model instance, which you can then use in a component or as a layer of a larger network. You can use Thinc as a thin wrapper around frameworks such as PyTorch, TensorFlow or MXNet, or you can implement your logic in Thinc directly. spaCy's built-in components will never construct their Model instances themselves, so you won't have to subclass the component to change its model architecture. You can just update the config so that it refers to a different registered function. Once the component has been created, its model instance has already been assigned, so you cannot change its model architecture. The architecture is like a recipe for the network, and you can't change the recipe once the dish has already been prepared. You have to make a new one.

Diagram of a pipeline component with its model

Type signatures

Example

@spacy.registry.architectures.register("spacy.Tagger.v1")
def build_tagger_model(
    tok2vec: Model[List[Doc], List[Floats2d]], nO: Optional[int] = None
) -> Model[List[Doc], List[Floats2d]]:
    t2v_width = tok2vec.get_dim("nO") if tok2vec.has_dim("nO") else None
    output_layer = Softmax(nO, t2v_width, init_W=zero_init)
    softmax = with_array(output_layer)
    model = chain(tok2vec, softmax)
    model.set_ref("tok2vec", tok2vec)
    model.set_ref("softmax", output_layer)
    model.set_ref("output_layer", output_layer)
    return model

The Thinc Model class is a generic type that can specify its input and output types. Python uses a square-bracket notation for this, so the type Model[List, Dict] says that each batch of inputs to the model will be a list, and the outputs will be a dictionary. Both typing.List and typing.Dict are also generics, allowing you to be more specific about the data. For instance, you can write Model[List[Doc], Dict[str, float]] to specify that the model expects a list of Doc objects as input, and returns a dictionary mapping strings to floats. Some of the most common types you'll see are:

Type Description
List[Doc] A batch of Doc objects. Most components expect their models to take this as input.
Floats2d A two-dimensional numpy or cupy array of floats. Usually 32-bit.
Ints2d A two-dimensional numpy or cupy array of integers. Common dtypes include uint64, int32 and int8.
List[Floats2d] A list of two-dimensional arrays, generally with one array per Doc and one row per token.
Ragged A container to handle variable-length sequence data in an unpadded contiguous array.
Padded A container to handle variable-length sequence data in a padded contiguous array.

The model type signatures help you figure out which model architectures and components can fit together. For instance, the TextCategorizer class expects a model typed Model[List[Doc], Floats2d], because the model will predict one row of category probabilities per Doc. In contrast, the Tagger class expects a model typed Model[List[Doc], List[Floats2d]], because it needs to predict one row of probabilities per token.

There's no guarantee that two models with the same type signature can be used interchangeably. There are many other ways they could be incompatible. However, if the types don't match, they almost surely won't be compatible. This little bit of validation goes a long way, especially if you configure your editor or other tools to highlight these errors early. Thinc will also verify that your types match correctly when your config file is processed at the beginning of training.

If you're using a modern editor like Visual Studio Code, you can set up mypy with the custom Thinc plugin and get live feedback about mismatched types as you write code.

Defining sublayers

Model architecture functions often accept sublayers as arguments, so that you can try substituting a different layer into the network. Depending on how the architecture function is structured, you might be able to define your network structure entirely through the config system, using layers that have already been defined. The transformers documentation section shows a common example of swapping in a different sublayer.

In most neural network models for NLP, the most important parts of the network are what we refer to as the embed and encode steps. These steps together compute dense, context-sensitive representations of the tokens. Most of spaCy's default architectures accept a tok2vec embedding layer as an argument, so you can control this important part of the network separately. This makes it easy to switch between transformer, CNN, BiLSTM or other feature extraction approaches. And if you want to define your own solution, all you need to do is register a Model[List[Doc], List[Floats2d]] architecture function, and you'll be able to try it out in any of the spaCy components.

Registering new architectures

  • Recap concept, link to config docs.

Wrapping PyTorch, TensorFlow and other frameworks

Thinc allows you to wrap models written in other machine learning frameworks like PyTorch, TensorFlow and MXNet using a unified Model API. As well as wrapping whole models, Thinc lets you call into an external framework for just part of your model: you can have a model where you use PyTorch just for the transformer layers, using "native" Thinc layers to do fiddly input and output transformations and add on task-specific "heads", as efficiency is less of a consideration for those parts of the network.

Thinc uses a special class, Shim, to hold references to external objects. This allows each wrapper space to define a custom type, with whatever attributes and methods are helpful, to assist in managing the communication between Thinc and the external library. The Model class holds shim instances in a separate list, and communicates with the shims about updates, serialization, changes of device, etc.

The wrapper will receive each batch of inputs, convert them into a suitable form for the underlying model instance, and pass them over to the shim, which will manage the actual communication with the model. The output is then passed back into the wrapper, and converted for use in the rest of the network. The equivalent procedure happens during backpropagation. Array conversion is handled via the DLPack standard wherever possible, so that data can be passed between the frameworks without copying the data back to the host device unnecessarily.

Framework Wrapper layer Shim DLPack
PyTorch PyTorchWrapper PyTorchShim
TensorFlow TensorFlowWrapper TensorFlowShim 1
MXNet MXNetWrapper MXNetShim
  1. DLPack support in TensorFlow is now available but still experimental.

Models for trainable components

  • Interaction with predict, get_loss and set_annotations
  • Initialization life-cycle with begin_training.
  • Link to relation extraction notebook.
def update(self, examples):
    docs = [ex.predicted for ex in examples]
    refs = [ex.reference for ex in examples]
    predictions, backprop = self.model.begin_update(docs)
    gradient = self.get_loss(predictions, refs)
    backprop(gradient)

def __call__(self, doc):
    predictions = self.model([doc])
    self.set_annotations(predictions)