Commit Graph

2490 Commits

Author SHA1 Message Date
Daniël de Kok
3937abd2e7 Merge remote-tracking branch 'upstream/v4' into store-activations 2022-08-30 10:11:04 +02:00
Daniël de Kok
aea53378dc Make the TrainablePipe.store_activations property a bool
This means that we can also bring back `store_activations` setter.
2022-08-29 16:41:11 +02:00
Adriane Boyd
4bce8fa755
Remove setup_requires from setup.cfg (#11384)
* Remove setup_requires from setup.cfg

* Update requirements test to ignore cython in setup.cfg
2022-08-29 13:23:24 +02:00
Adriane Boyd
2a558a7cdc
Switch to mecab-ko as default Korean tokenizer (#11294)
* Switch to mecab-ko as default Korean tokenizer

Switch to the (confusingly-named) mecab-ko python module for default Korean
tokenization.

Maintain the previous `natto-py` tokenizer as
`spacy.KoreanNattoTokenizer.v1`.

* Temporarily run tests with mecab-ko tokenizer

* Fix types

* Fix duplicate test names

* Update requirements test

* Revert "Temporarily run tests with mecab-ko tokenizer"

This reverts commit d2083e7044.

* Add mecab_args setting, fix pickle for KoreanNattoTokenizer

* Fix length check

* Update docs

* Formatting

* Update natto-py error message

Co-authored-by: Paul O'Leary McCann <polm@dampfkraft.com>

Co-authored-by: Paul O'Leary McCann <polm@dampfkraft.com>
2022-08-26 10:11:18 +02:00
Adriane Boyd
740c33fe58 Merge remote-tracking branch 'upstream/develop' into chore/update-v4-from-develop 2022-08-24 20:43:07 +02:00
Adriane Boyd
81874265e9 Merge remote-tracking branch 'upstream/master' into chore/update-develop-from-master-v3.5-1 2022-08-24 12:47:42 +02:00
Adriane Boyd
c44d243f25 Merge remote-tracking branch 'upstream/master' into chore/update-v4-from-master 2022-08-24 07:15:41 +02:00
Tobius Saul
c09d2fa25b
luganda language extension (#10847)
* luganda language extension

* __init__.py changes

* New enhancements

* Lexical attribute changed

* punctuaction and sentence additions

* Remove comment header

* Fix typos, reformat

* reformated version

* Add tokenizer test

* Remove contractions from stop words

* Format

* Add Luganda to website

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2022-08-23 13:09:36 +02:00
Edward
5afa98aabf
Support custom attributes for tokens and spans in json conversion (#11125)
* Add token and span custom attributes to to_json()

* Change logic for to_json

* Add functionality to from_json

* Small adjustments

* Move token/span attributes to new dict key

* Fix test

* Fix the same test but much better

* Add backwards compatibility tests and adjust logic

* Add test to check if attributes not set in underscore are not saved in the json

* Add tests for json compatibility

* Adjust test names

* Fix tests and clean up code

* Fix assert json tests

* small adjustment

* adjust naming and code readability

* Adjust naming, added more tests and changed logic

* Fix typo

* Adjust errors, naming, and small test optimization

* Fix byte tests

* Fix bytes tests

* Change naming and json structure

* update schema

* Update spacy/schemas.py

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Update spacy/tokens/doc.pyx

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Update spacy/tokens/doc.pyx

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Update spacy/schemas.py

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Update schema for underscore attributes

* Adjust underscore schema

* adjust schema tests

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2022-08-23 10:05:02 +02:00
Adriane Boyd
bb0e178878
Make Span/Doc.ents more consistent for ent_kb_id and ent_id (#11328)
* Map `Span.id` to `Token.ent_id` in all cases when setting `Doc.ents`
* Reset `Token.ent_id` and `Token.ent_kb_id` when setting `Doc.ents`
* Make `Span.ent_id` an alias of `Span.id` rather than a read-only view
of the root token's `ent_id` annotation
2022-08-22 20:28:57 +02:00
Adriane Boyd
f55bb7470d
Clean up warnings in the test suite (#11331) 2022-08-22 12:04:30 +02:00
Adriane Boyd
5fa8f4faca
Switch ru and uk lemmatizers to pymorphy3 (#11345)
* Switch ru and uk lemmatizers to pymorphy3

* Switch to pymorphy3 in tests
2022-08-22 11:27:14 +02:00
Adriane Boyd
3e4cf1bbe1
Check for . in factory names (#11336) 2022-08-19 09:52:12 +02:00
Adriane Boyd
d757dec5c4
Remove intify_attrs(_do_deprecated) (#11319) 2022-08-17 12:13:54 +02:00
antonpibm
551e73ccfc
Match private networks as URLs (#11121) 2022-08-11 11:26:26 +02:00
Adriane Boyd
ed4ad309e6
Fix Dutch noun chunks to skip overlapping spans (#11275)
* Add test for overlapping noun chunks

* Skip overlapping noun chunks

* Update spacy/tests/lang/nl/test_noun_chunks.py

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2022-08-10 09:49:08 +02:00
Daniël de Kok
1cfbb934ed TextCat.predict: return dict 2022-08-05 14:40:42 +02:00
stefawolf
23749cfc91
adding spans to doc_annotation in Example.to_dict (#11261)
* adding spans to doc_annotation in Example.to_dict

* to_dict compatible with from_dict: tuples instead of spans

* use strings for label and kb_id

* Simplify test

* Update data formats docs

Co-authored-by: Stefanie Wolf <stefanie.wolf@vitecsoftware.com>
Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2022-08-05 12:26:38 +02:00
Luka Dragar
b64243ed55
Updates to Slovenian language (#11162)
* Added examples for Slovene

* Update spacy/lang/sl/examples.py

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Corrected a typo in one of the sentences

* Updated support for Slovenian

* Some minor changes to corrections

* Added forint currency

* Corrected HYPHENS_PERMITTED regex and some formatting

* Minor changes

* Un-xfail tokenizer test

* Format

Co-authored-by: Luka Dragar <D20124481@mytudublin.ie>
Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2022-08-05 10:10:18 +02:00
Daniël de Kok
51f72e41ec Replace store_activations setter by set_store_activations method
Setters that take a different type than what the getter returns are still
problematic for MyPy. Replace the setter by a method, so that type inference
works everywhere.
2022-08-04 15:14:22 +02:00
Daniël de Kok
288d27e17e Merge remote-tracking branch 'upstream/v4' into store-activations 2022-08-01 09:30:04 +02:00
Daniël de Kok
1ff683a50b Merge remote-tracking branch 'upstream/master' into merge-master-v4-20220728 2022-07-28 13:53:59 +02:00
ninjalu
95a1b8aca6
add additional REL_OP (#10371)
* add additional  REL_OP

* change to condition and new rel_op symbols

* add operators to docs

* add the anchor while we're in here

* add tests

Co-authored-by: Peter Baumgartner <5107405+pmbaumgartner@users.noreply.github.com>
2022-07-27 13:16:44 +02:00
Adriane Boyd
e5990db713 Revert "Temporarily skip tests that require models/compat"
This reverts commit d9320db7db.
2022-07-25 18:12:18 +02:00
github-actions[bot]
e7fd06bdbe
Auto-format code with black (#11099)
Co-authored-by: explosion-bot <explosion-bot@users.noreply.github.com>
2022-07-08 18:43:25 +09:00
Madeesh Kannan
d36d66b7ca
Increase test deadline to 30 minutes to prevent spurious test failures (#11070)
* Increase test deadline to 30 minutes to prevent spurious test failures

* Reduce deadline to 2 minutes
2022-07-04 18:37:09 +02:00
Raphael Mitsch
e9eb59699f
NEL confidence threshold (#11016)
* Add base for NEL abstention threshold mechanism.

* Add abstention threshold to entity linker. Add test.

* Fix entity linking tests.

* Changed abstention default threshold from 0 to None.

* Fix default values for abstention thresholds.

* Fix mypy errors.

* Replace assertion with raise of proper error code.

* Simplify threshold check. Remove thresholding from EntityLinker_v1.

* Rename test.

* Update spacy/pipeline/entity_linker.py

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Update spacy/pipeline/entity_linker.py

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Make E1043 configurable.

* Update docs.

* Rephrase description in docs. Adjusting error code message.

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2022-07-04 17:05:21 +02:00
explosion-bot
7e55a51314 Auto-format code with black 2022-07-01 08:04:32 +00:00
Adriane Boyd
3fe9f47de4
Revert "disable failing test because Stanford servers are down (#11015)" (#11054)
This reverts commit f8116078ce.
2022-06-30 11:24:54 +02:00
Shen Qin
be00db6645
Addition of min_max quantifier in matcher {n,m} (#10981)
* Min_max_operators
1. Modified API and Usage for spaCy website to include min_max operator
2. Modified matcher.pyx to include min_max function {n,m} and its variants
3. Modified schemas.py to include min_max validation error
4. Added test cases to test_matcher_api.py, test_matcher_logic.py and test_pattern_validation.py

* attempt to fix mypy/pydantic compat issue

* formatting

* Update spacy/tests/matcher/test_pattern_validation.py

Co-authored-by: Source-Shen <82353723+Source-Shen@users.noreply.github.com>
Co-authored-by: svlandeg <svlandeg@github.com>
Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2022-06-30 11:01:58 +02:00
Adriane Boyd
24f4908fce
Update vector handling in similarity methods (#11013)
Distinguish between vectors that are 0 vs. missing vectors when warning
about missing vectors.

Update `Doc.has_vector` to match `Span.has_vector` and
`Token.has_vector` for cases where the vocab has vectors but none of the
tokens in the container have vectors.
2022-06-28 19:50:47 +02:00
Madeesh Kannan
1d5cad0b42
Example.get_aligned_parse: Handle unit and zero length vectors correctly (#11026)
* `Example.get_aligned_parse`: Do not squeeze gold token idx vector
Correctly handle zero-size vectors passed to `np.vectorize`

* Add tests

* Use `Doc` ctor to initialize attributes

* Remove unintended change

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Remove unused import

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
2022-06-28 19:42:58 +02:00
Richard Hudson
a9559e7435
Handle Cyrillic combining diacritics (#10837)
* Handle Russian, Ukrainian and Bulgarian

* Corrections

* Correction

* Correction to comment

* Changes based on review

* Correction

* Reverted irrelevant change in punctuation.py

* Remove unnecessary group

* Reverted accidental change
2022-06-28 15:35:32 +02:00
Daniël de Kok
df513beddb Merge remote-tracking branch 'upstream/v4' into store-activations 2022-06-27 19:21:33 +02:00
Daniël de Kok
1605ef7319 Merge remote-tracking branch 'upstream/master' into merge-master-v4-20220627-2 2022-06-27 17:45:45 +02:00
Daniël de Kok
508b96fdc7 Merge remote-tracking branch 'upstream/master' into store-activations 2022-06-27 14:14:44 +02:00
github-actions[bot]
4155a59d47
Auto-format code with black (#11022)
Co-authored-by: explosion-bot <explosion-bot@users.noreply.github.com>
2022-06-27 09:35:35 +02:00
Adriane Boyd
d9320db7db Temporarily skip tests that require models/compat 2022-06-24 11:20:53 +02:00
Daniël de Kok
c8a12c5d85 Extend tagger and senter tests
So that they, like the other tests, also check that we get no
activations if no activations were requested.
2022-06-24 10:18:00 +02:00
Daniël de Kok
1c9be0d8ab trainable_lemmatizer/entity_linker: add store_activations option 2022-06-23 15:47:00 +02:00
Sofie Van Landeghem
f8116078ce
disable failing test because Stanford servers are down (#11015) 2022-06-23 10:57:46 +02:00
Daniël de Kok
8772b9ccc4 textcat/textcat_multilabel: add store_activations option 2022-06-22 20:40:53 +02:00
Daniël de Kok
acf47e8e48 Support store_activations in spancat and morphologizer 2022-06-22 16:29:52 +02:00
Daniël de Kok
c3da32b46b Change type of store_activations to Union[bool, List[str]]
When the value is:

- A bool: all activations are stored when set to `True`.
- A List[str]: the activations named in the list are stored
2022-06-22 14:28:03 +02:00
Daniël de Kok
b71c6043bc Store activations in Doc when store_activations is enabled
This change adds the new `activations` attribute to `Doc`. This
attribute can be used by trainable pipes to store their activations,
probabilities, and guesses for downstream users.

As an example, this change modifies the `tagger` and `senter` pipes to
add an `store_activations` option. When this option is enabled, the
probabilities and guesses are stored in `set_annotations`.
2022-06-22 10:03:26 +02:00
Raphael Mitsch
4c058eb40a
enable argument for spacy.load() (#10784)
* Enable flag on spacy.load: foundation for include, enable arguments.

* Enable flag on spacy.load: fixed tests.

* Enable flag on spacy.load: switched from pretrained model to empty model with added pipes for tests.

* Enable flag on spacy.load: switched to more consistent error on misspecification of component activity. Test refactoring. Added  to default config.

* Enable flag on spacy.load: added support for fields not in pipeline.

* Enable flag on spacy.load: removed serialization fields from supported fields.

* Enable flag on spacy.load: removed 'enable' from config again.

* Enable flag on spacy.load: relaxed checks in _resolve_component_activation_status() to allow non-standard pipes.

* Enable flag on spacy.load: fixed relaxed checks for _resolve_component_activation_status() to allow non-standard pipes. Extended tests.

* Enable flag on spacy.load: comments w.r.t. resolution workarounds.

* Enable flag on spacy.load: remove include fields. Update website docs.

* Enable flag on spacy.load: updates w.r.t. changes in master.

* Implement Doc.from_json(): update docstrings.

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Implement Doc.from_json(): remove newline.

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Implement Doc.from_json(): change error message for E1038.

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>

* Enable flag on spacy.load: wrapped docstring for _resolve_component_status() at 80 chars.

* Enable flag on spacy.load: changed exmples for enable flag.

* Remove newline.

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Fix docstring for Language._resolve_component_status().

* Rename E1038 to E1042.

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2022-06-17 20:24:13 +01:00
Sofie Van Landeghem
eaeca5eb6a
account for NER labels with a hyphen in the name (#10960)
* account for NER labels with a hyphen in the name

* cleanup

* fix docstring

* add return type to helper method

* shorter method and few more occurrences

* user helper method across repo

* fix circular import

* partial revert to avoid circular import
2022-06-17 20:02:37 +01:00
Madeesh Kannan
126d1db123
Add failing test: test_matcher_extension_in_set_predicate (#10948) 2022-06-13 10:56:45 +02:00
github-actions[bot]
97e8a5041b
Auto-format code with black (#10945)
Co-authored-by: explosion-bot <explosion-bot@users.noreply.github.com>
2022-06-10 13:21:33 +02:00
Daniël de Kok
2f05c6824c Merge remote-tracking branch 'upstream/master' into merge-master-v4-20220609 2022-06-09 10:18:25 +02:00