Commit Graph

1785 Commits

Author SHA1 Message Date
Sofie Van Landeghem
492d1ec5de
Prevent alignment when texts don't match (#5867)
* remove empty gold.pyx

* add alignment unit test (to be used in docs)

* ensure that Alignment is only used on equal texts

* additional test using example.alignment

* formatting

Co-authored-by: Matthew Honnibal <honnibal+gh@gmail.com>
2020-08-04 16:29:18 +02:00
Matthew Honnibal
ecb3c4e8f4
Create corpus iterator and batcher from registry during training (#5865)
* Move batchers into their own module (and registry)

* Update CLI

* Update Corpus and batcher

* Update tests

* Update one config

* Merge 'evaluation' block back under [training]

* Import batchers in gold __init__

* Fix batchers

* Update config

* Update schema

* Update util

* Don't assume train and dev are actually paths

* Update onto-joint config

* Fix missing import

* Format

* Format

* Update spacy/gold/corpus.py

Co-authored-by: Ines Montani <ines@ines.io>

* Fix name

* Update default config

* Fix get_length option in batchers

* Update test

* Add comment

* Pass path into Corpus

* Update docstring

* Update schema and configs

* Update config

* Fix test

* Fix paths

* Fix print

* Fix create_train_batches

* [training.read_train] -> [training.train_corpus]

* Update onto-joint config

Co-authored-by: Ines Montani <ines@ines.io>
2020-08-04 15:09:37 +02:00
Sofie Van Landeghem
82347110f5
Default empty KB in EL component (#5872)
* EL field documentation

* documentation consistent with docs

* default empty KB, initialize vocab separately

* formatting

* add test for changing the default entity vector length

* update comment
2020-08-04 14:34:09 +02:00
Adriane Boyd
b7e3018d97
Recalculate alignment if tokenization differs (#5868)
* Recalculate alignment if tokenization differs

* Refactor cached alignment data
2020-08-04 14:31:32 +02:00
Ines Montani
b40f44419b Simplify pipe analysis
- remove unused code
- don't print by default
- integrate attrs info into analysis output
2020-08-01 13:40:06 +02:00
Ines Montani
b68c53858c Remove global 2020-07-31 18:37:58 +02:00
Ines Montani
30a76fcf6f Integrate and simplify pipe analysis 2020-07-31 18:34:35 +02:00
Adriane Boyd
9b509aa87f Move Language.evaluate scorer config to new arg
Move `Language.evaluate` scorer config from `component_cfg` to separate
argument `scorer_cfg`.
2020-07-31 11:05:16 +02:00
Sofie Van Landeghem
ca491722ad
The Parser is now a Pipe (2) (#5844)
* moving syntax folder to _parser_internals

* moving nn_parser and transition_system

* move nn_parser and transition_system out of internals folder

* moving nn_parser code into transition_system file

* rename transition_system to transition_parser

* moving parser_model and _state to ml

* move _state back to internals

* The Parser now inherits from Pipe!

* small code fixes

* removing unnecessary imports

* remove link_vectors_to_models

* transition_system to internals folder

* little bit more cleanup

* newlines
2020-07-30 23:30:54 +02:00
Matthew Honnibal
f0cf4a2dca Update tests 2020-07-29 14:01:14 +02:00
Matthew Honnibal
c7d1ece3eb Update tests 2020-07-29 14:01:13 +02:00
Matthew Honnibal
20e9098e3f Update tests 2020-07-29 14:01:12 +02:00
Matthew Honnibal
1784c95827 Clean up link_vectors_to_models unused stuff 2020-07-29 14:01:11 +02:00
Sofie Van Landeghem
40c995b1be
Option for returning only greedy matches (#5771)
* add "greedy" option for match pattern

* distinction between greedy FIRST or LONGEST

* check for proper values, throw custom warning otherwise

* unxfail one more test

* add comment in docstring

* add test that LONGEST also prefers first match if equal length

* use c arrays for more efficient processing

* rename 'greediness' to 'greedy'
2020-07-29 11:04:43 +02:00
Ines Montani
b83ead5bf5
Merge pull request #5824 from svlandeg/fix/textcat-v3 2020-07-28 15:04:25 +02:00
Ines Montani
06a97a8766 Support --opt=value format in CLI config overrides 2020-07-28 13:43:15 +02:00
Ines Montani
0094cb0d04 Remove scores list from config and document 2020-07-28 11:22:24 +02:00
Ines Montani
894e20c466 Merge branch 'develop' into feature/component-scores 2020-07-27 18:14:39 +02:00
svlandeg
85b2dcfd67 cleanup 2020-07-27 17:54:44 +02:00
svlandeg
61068e0fb1 util function dot_to_object and corresponding unit test 2020-07-27 17:50:12 +02:00
Adriane Boyd
8bb0507777 Add and update score methods and score weights
Add and update `score` methods, provided `scores`, and default weights
`default_score_weights` for pipeline components.

* `scores` provides all top-level keys returned by `score` (merely informative, similar to `assigns`).
* `default_score_weights` provides the default weights for a default config.
* The keys from `default_score_weights` determine which values will be
shown in the `spacy train` output, so keys with weight `0.0` will be
displayed but not counted toward the overall score.
2020-07-27 14:44:53 +02:00
Adriane Boyd
baf19fd652 Update cats scoring to provide overall score
* Provide top-level score as `attr_score`
* Provide a description of the score as `attr_score_desc`
* Provide all potential scores keys, setting unused keys to `None`
* Update CLI evaluate accordingly
2020-07-27 12:26:10 +02:00
Ines Montani
ed61fb10fc Rename default textcat arch to TextCatEnsemble 2020-07-26 15:11:43 +02:00
Ines Montani
4060c2d5a6 Fix test 2020-07-26 13:40:19 +02:00
Ines Montani
2470486543 Allow pipeline components to set default scores and weights 2020-07-26 13:18:43 +02:00
Ines Montani
e92df281ce Tidy up, autoformat, add types 2020-07-25 15:01:15 +02:00
Ines Montani
cdbd6ba912
Merge pull request #5798 from explosion/feature/language-data-config 2020-07-25 13:34:49 +02:00
Adriane Boyd
2bcceb80c4
Refactor the Scorer to improve flexibility (#5731)
* Refactor the Scorer to improve flexibility

Refactor the `Scorer` to improve flexibility for arbitrary pipeline
components.

* Individual pipeline components provide their own `evaluate` methods
that score a list of `Example`s and return a dictionary of scores
* `Scorer` is initialized either:
  * with a provided pipeline containing components to be scored
  * with a default pipeline containing the built-in statistical
    components (senter, tagger, morphologizer, parser, ner)
* `Scorer.score` evaluates a list of `Example`s and returns a dictionary
of scores referring to the scores provided by the components in the
pipeline

Significant differences:

* `tags_acc` is renamed to `tag_acc` to be consistent with `token_acc`
and the new `morph_acc`, `pos_acc`, and `lemma_acc`
* Scoring is no longer cumulative: `Scorer.score` scores a list of
examples rather than a single example and does not retain any state
about previously scored examples
* PRF values in the returned scores are no longer multiplied by 100

* Add kwargs to Morphologizer.evaluate

* Create generalized scoring methods in Scorer

* Generalized static scoring methods are added to `Scorer`
  * Methods require an attribute (either on Token or Doc) that is
used to key the returned scores

Naming differences:

* `uas`, `las`, and `las_per_type` in the scores dict are renamed to
`dep_uas`, `dep_las`, and `dep_las_per_type`

Scoring differences:

* `Doc.sents` is now scored as spans rather than on sentence-initial
token positions so that `Doc.sents` and `Doc.ents` can be scored with
the same method (this lowers scores since a single incorrect sentence
start results in two incorrect spans)

* Simplify / extend hasattr check for eval method

* Add hasattr check to tokenizer scoring
* Simplify to hasattr check for component scoring

* Reset Example alignment if docs are set

Reset the Example alignment if either doc is set in case the
tokenization has changed.

* Add PRF tokenization scoring for tokens as spans

Add PRF scores for tokens as character spans. The scores are:

* token_acc: # correct tokens / # gold tokens
* token_p/r/f: PRF for (token.idx, token.idx + len(token))

* Add docstring to Scorer.score_tokenization

* Rename component.evaluate() to component.score()

* Update Scorer API docs

* Update scoring for positive_label in textcat

* Fix TextCategorizer.score kwargs

* Update Language.evaluate docs

* Update score names in default config
2020-07-25 12:53:02 +02:00
Ines Montani
b9aaa4e457 Improve vocab data integration and warning 2020-07-25 11:51:30 +02:00
Ines Montani
38f6ea7a78 Simplify language data and revert detailed configs 2020-07-24 14:50:26 +02:00
Adriane Boyd
656574a01a
Update Japanese tests (#5807)
* Update POS tests to reflect current behavior (it is not entirely clear
whether the AUX/VERB mapping is indeed the desired behavior?)
* Switch to `from_config` initialization in subtoken test
2020-07-24 12:45:14 +02:00
Adriane Boyd
fdb8815ef5
Minor refactor for Morphology and MorphAnalysis (#5804)
* `MorphAnalysis.get` returns only the field values
* Move `_normalize_props` inside `Morphology` as
`Morphology.normalize_attrs` and simplify
  * Simplify POS field detection/conversion
  * Convert all non-POS features to strings
* `Morphology` returns an empty string for a missing morph to align
with the FEATS string returned for an existing morph
* Remove unused `list_to_feats`
2020-07-24 09:28:06 +02:00
Ines Montani
a624ae0675 Remove POS, TAG and LEMMA from tokenizer exceptions 2020-07-22 23:09:01 +02:00
Ines Montani
14d7d46f89 Merge branch 'develop' into feature/language-data-config 2020-07-22 22:18:53 +02:00
Ines Montani
b507f61629 Tidy up and move noun_chunks, token_match, url_match 2020-07-22 22:18:46 +02:00
Ines Montani
d0c6d1efc5
@factories -> factory (#5801) 2020-07-22 17:29:31 +02:00
Ines Montani
945f795a3e WIP: move more language data to config 2020-07-22 15:59:37 +02:00
Adriane Boyd
b84fd70cc3
Fix exceptions for Morphology.__reduce__ (#5792)
Pickle exceptions in the MORPH_RULES format instead of the internal
format after the recent `Morphology.__init__` changes.
2020-07-22 15:00:25 +02:00
Ines Montani
43b960c01b
Refactor pipeline components, config and language data (#5759)
* Update with WIP

* Update with WIP

* Update with pipeline serialization

* Update types and pipe factories

* Add deep merge, tidy up and add tests

* Fix pipe creation from config

* Don't validate default configs on load

* Update spacy/language.py

Co-authored-by: Ines Montani <ines@ines.io>

* Adjust factory/component meta error

* Clean up factory args and remove defaults

* Add test for failing empty dict defaults

* Update pipeline handling and methods

* provide KB as registry function instead of as object

* small change in test to make functionality more clear

* update example script for EL configuration

* Fix typo

* Simplify test

* Simplify test

* splitting pipes.pyx into separate files

* moving default configs to each component file

* fix batch_size type

* removing default values from component constructors where possible (TODO: test 4725)

* skip instead of xfail

* Add test for config -> nlp with multiple instances

* pipeline.pipes -> pipeline.pipe

* Tidy up, document, remove kwargs

* small cleanup/generalization for Tok2VecListener

* use DEFAULT_UPSTREAM field

* revert to avoid circular imports

* Fix tests

* Replace deprecated arg

* Make model dirs require config

* fix pickling of keyword-only arguments in constructor

* WIP: clean up and integrate full config

* Add helper to handle function args more reliably

Now also includes keyword-only args

* Fix config composition and serialization

* Improve config debugging and add visual diff

* Remove unused defaults and fix type

* Remove pipeline and factories from meta

* Update spacy/default_config.cfg

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Update spacy/default_config.cfg

* small UX edits

* avoid printing stack trace for debug CLI commands

* Add support for language-specific factories

* specify the section of the config which holds the model to debug

* WIP: add Language.from_config

* Update with language data refactor WIP

* Auto-format

* Add backwards-compat handling for Language.factories

* Update morphologizer.pyx

* Fix morphologizer

* Update and simplify lemmatizers

* Fix Japanese tests

* Port over tagger changes

* Fix Chinese and tests

* Update to latest Thinc

* WIP: xfail first Russian lemmatizer test

* Fix component-specific overrides

* fix nO for output layers in debug_model

* Fix default value

* Fix tests and don't pass objects in config

* Fix deep merging

* Fix lemma lookup data registry

Only load the lookups if an entry is available in the registry (and if spacy-lookups-data is installed)

* Add types

* Add Vocab.from_config

* Fix typo

* Fix tests

* Make config copying more elegant

* Fix pipe analysis

* Fix lemmatizers and is_base_form

* WIP: move language defaults to config

* Fix morphology type

* Fix vocab

* Remove comment

* Update to latest Thinc

* Add morph rules to config

* Tidy up

* Remove set_morphology option from tagger factory

* Hack use_gpu

* Move [pipeline] to top-level block and make [nlp.pipeline] list

Allows separating component blocks from component order – otherwise, ordering the config would mean a changed component order, which is bad. Also allows initial config to define more components and not use all of them

* Fix use_gpu and resume in CLI

* Auto-format

* Remove resume from config

* Fix formatting and error

* [pipeline] -> [components]

* Fix types

* Fix tagger test: requires set_morphology?

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
Co-authored-by: svlandeg <sofie.vanlandeghem@gmail.com>
Co-authored-by: Matthew Honnibal <honnibal+gh@gmail.com>
2020-07-22 13:42:59 +02:00
Ines Montani
311d0bde29
Merge pull request #5788 from explosion/master-tmp 2020-07-20 15:39:24 +02:00
Ines Montani
d51db72e46 Remove Python 2 marker 2020-07-20 15:01:36 +02:00
Ines Montani
644074b954 Merge branch 'develop' into master-tmp 2020-07-20 14:58:04 +02:00
Sofie Van Landeghem
c9da9605f7
Test suite clean up (#5781)
* step_through tests: skip instead of xfail

* test_empty_doc should be fixed with new Thinc version

* remove outdated test (there are other misaligned tests now)

* xfail reason

* fix test according to french exceptions

* clarified some skipped tests

* skip ukranian test instead of xfail

* skip instead of xfail

* skip + reason instead of xfail

* removed obsolete tests referring to removed "set_frozen" functionality

* fix test 999

* remove unused AlignmentError

* remove xfail where possible, skip otherwise

* increment thinc release for empty_doc test
2020-07-20 14:49:54 +02:00
Sofie Van Landeghem
1b2ec94382
Hyphen infix (#5770)
* infix split on hyphen when preceded by number

* clean up

* skip ukranian test instead of xfail
2020-07-20 14:48:51 +02:00
Ines Montani
cb65b36839
Merge pull request #5767 from adrianeboyd/feature/remove-tag-maps 2020-07-19 15:15:34 +02:00
Ines Montani
796f6c52d1 Merge branch 'develop' into pr/5767 2020-07-19 13:37:46 +02:00
Adriane Boyd
39ebcd9ec9
Refactor Chinese tokenizer configuration (#5736)
* Refactor Chinese tokenizer configuration

Refactor `ChineseTokenizer` configuration so that it uses a single
`segmenter` setting to choose between character segmentation, jieba, and
pkuseg.

* replace `use_jieba`, `use_pkuseg`, `require_pkuseg` with the setting
`segmenter` with the supported values: `char`, `jieba`, `pkuseg`
* make the default segmenter plain character segmentation `char` (no
additional libraries required)

* Fix Chinese serialization test to use char default

* Warn if attempting to customize other segmenter

Add a warning if `Chinese.pkuseg_update_user_dict` is called when
another segmenter is selected.
2020-07-19 13:34:37 +02:00
Adriane Boyd
9ee1c54f40
Improve tag map initialization and updating (#5764)
* Improve tag map initialization and updating

Generalize tag map initialization and updating so that the tag map can
be loaded correctly prior to loading a `Corpus` with `spacy debug-data`
and `spacy train`.

* normalize provided tag map as necessary
* use the same method for initializing and updating the tag map

* Replace rather than update tag map

Replace rather than update tag map when loading a custom tag map.
Updating the tag map is problematic due to the sorted list of tag names
and the fact that the tag map will contain lingering/unwanted tags from
the default tag map.

* Update CLI scripts

* Reinitialize cache after loading new tag map

Reinitialize the cache with the right size after loading a new tag map.
2020-07-19 13:13:57 +02:00
Adriane Boyd
b81a89f0a9
Update morphologizer (#5766)
* update `Morphologizer.begin_training` for use with `Example`

* make init and begin_training more consistent

* add `Morphology.normalize_features` to normalize outside of
`Morphology.add`

* make sure `get_loss` doesn't create unknown labels when the POS and
morph alignments differ
2020-07-19 11:10:51 +02:00
Adriane Boyd
50db3f0cdb Serialize morph rules with tagger
Serialize `morph_rules` with the tagger alongside the `tag_map`.

Use `Morphology.load_tag_map` and `Morphology.load_morph_exceptions` to
load these settings rather than reinitializing the morphology each time
they are changed.
2020-07-17 08:22:21 +02:00