Commit Graph

1463 Commits

Author SHA1 Message Date
svlandeg
a071279bc7 add speed comparison to docs 2021-01-22 18:46:35 +01:00
svlandeg
b132cb3036 update accuracies for new a1 models 2021-01-21 20:24:05 +01:00
Adriane Boyd
d0236136a2
Fix default config init in Transformer API docs (#6781) 2021-01-21 23:18:03 +08:00
Sofie Van Landeghem
e680efc7cc
Set annotations in update (#6767)
* bump to 3.0.0rc4

* do set_annotations in component update calls

* update docs and remove set_annotations flag

* fix EL test
2021-01-20 11:49:25 +11:00
Sofie Van Landeghem
57640aa838
warn when frozen components break listener pattern (#6766)
* warn when frozen components break listener pattern

* few notes in the documentation

* update arg name

* formatting

* cleanup

* specify listeners return type
2021-01-20 11:12:35 +11:00
Ines Montani
4a1029a9b6 Add infobox [ci skip] 2021-01-19 19:18:39 +11:00
Ines Montani
f50502dad7 Update docs [ci skip] 2021-01-19 00:22:47 +11:00
Sofie Van Landeghem
fed8f48965
raise NotImplementedError when noun_chunks iterator is not implemented (#6711)
* raise NotImplementedError when noun_chunks iterator is not implemented

* bring back, fix and document span.noun_chunks

* formatting

Co-authored-by: Matthew Honnibal <honnibal+gh@gmail.com>
2021-01-17 19:56:05 +08:00
Adriane Boyd
bf0cdae8d4
Add token_splitter component (#6726)
* Add long_token_splitter component

Add a `long_token_splitter` component for use with transformer
pipelines. This component splits up long tokens like URLs into smaller
tokens. This is particularly relevant for pretrained pipelines with
`strided_spans`, since the user can't change the length of the span
`window` and may not wish to preprocess the input texts.

The `long_token_splitter` splits tokens that are at least
`long_token_length` tokens long into smaller tokens of `split_length`
size.

Notes:

* Since this is intended for use as the first component in a pipeline,
the token splitter does not try to preserve any token annotation.
* API docs to come when the API is stable.

* Adjust API, add test

* Fix name in factory
2021-01-17 19:54:41 +08:00
Adriane Boyd
9328dd5625
Handle unset token.morph in Morphologizer (#6704)
* Handle unset token.morph in Morphologizer

Handle unset `token.morph` in `Morphologizer.initialize` and
`Morphologizer.get_loss`. If both `token.morph` and `token.pos` are
unset, treat the annotation as missing rather than empty.

* Add token.has_morph()
2021-01-15 17:20:10 +01:00
Adriane Boyd
0c936004d1 Merge remote-tracking branch 'upstream/master' into chore/update-develop-from-master-rc3 2021-01-14 11:49:58 +01:00
Matthew Honnibal
f277bfdf0f
Add SpanGroup and Graph container types to represent arbitrary annotations (#6696)
* Draft out initial Spans data structure

* Initial span group commit

* Basic span group support on Doc

* Basic test for span group

* Compile span_group.pyx

* Draft addition of SpanGroup to DocBin

* Add deserialization for SpanGroup

* Add tests for serializing SpanGroup

* Fix serialization of SpanGroup

* Add EdgeC and GraphC structs

* Add draft Graph data structure

* Compile graph

* More work on Graph

* Update GraphC

* Upd graph

* Fix walk functions

* Let Graph take nodes and edges on construction

* Fix walking and getting

* Add graph tests

* Fix import

* Add module with the SpanGroups dict thingy

* Update test

* Rename 'span_groups' attribute

* Try to fix c++11 compilation

* Fix test

* Update DocBin

* Try to fix compilation

* Try to fix graph

* Improve SpanGroup docstrings

* Add doc.spans to documentation

* Fix serialization

* Tidy up and add docs

* Update docs [ci skip]

* Add SpanGroup.has_overlap

* WIP updated Graph API

* Start testing new Graph API

* Update Graph tests

* Update Graph

* Add docstring

Co-authored-by: Ines Montani <ines@ines.io>
2021-01-14 17:30:41 +11:00
Adriane Boyd
a45d89f09a Add initialize.before_init and after_init callbacks
Add `initialize.before_init` and `initialize.after_init` callbacks to
the config. The `initialize.before_init` callback is a place to
implement one-time tokenizer customizations that are then saved with the
model.
2021-01-12 13:07:44 +01:00
Sofie Van Landeghem
a612a5ba3f
fix small typos (#6698) 2021-01-08 09:39:47 +01:00
Sofie Van Landeghem
75d9019343
Fix types of Tok2Vec encoding architectures (#6442)
* fix TorchBiLSTMEncoder documentation

* ensure the types of the encoding Tok2vec layers are correct

* update references from v1 to v2 for the new architectures
2021-01-07 16:39:27 +11:00
Sofie Van Landeghem
82ae95267a
Docs for pretrain architectures (#6605)
* document pretraining architectures

* formatting

* bit more info

* small fixes
2021-01-06 16:12:30 +11:00
Sofie Van Landeghem
afc5714d32
multi-label textcat component (#6474)
* multi-label textcat component

* formatting

* fix comment

* cleanup

* fix from #6481

* random edit to push the tests

* add explicit error when textcat is called with multi-label gold data

* fix error nr

* small fix
2021-01-06 13:07:14 +11:00
Ines Montani
6f83abb971
Merge pull request #6647 from svlandeg/feature/init_config_overwrite 2021-01-05 14:59:04 +11:00
Ines Montani
3614472e29
Merge pull request #6646 from svlandeg/feature/cli-docs [ci skip] 2021-01-05 13:52:49 +11:00
Ines Montani
9c078a5885
Update formatting for consistency [ci skip] 2021-01-05 13:52:28 +11:00
Ines Montani
a9e845426f Use --force for consistency and add docs 2021-01-05 13:49:59 +11:00
svlandeg
d5ff0fecf8 add docs 2020-12-30 14:01:13 +01:00
svlandeg
2fa23b0304 fix capitalization for link 2020-12-29 15:01:22 +01:00
svlandeg
43cc6aea93 remove non-existing link 2020-12-29 14:59:39 +01:00
svlandeg
543073bf9d add pretrain example 2020-12-29 14:51:23 +01:00
svlandeg
1d0ef98873 move example 2020-12-29 14:46:03 +01:00
svlandeg
20113b8063 add train CLI example 2020-12-29 14:44:56 +01:00
Sofie Van Landeghem
87562e470d
fix backticks in docs (#6635) 2020-12-27 22:12:37 +01:00
Sofie Van Landeghem
8df5b7f513
fix documentation of 'path' in tokenizer.to_disk (#6634) 2020-12-27 22:01:06 +01:00
Sofie Van Landeghem
282a3b49ea
Fix parser resizing when there is no upper layer (#6460)
* allow resizing of the parser model even when upper=False

* update from spacy.TransitionBasedParser.v1 to v2

* bugfix
2020-12-18 18:56:57 +08:00
Gareth Sparks
efc229c3f4
Doc.char_span arg: alignment_mode (#6591)
Currently labeled "mode", actually "alignment_mode"
2020-12-18 09:54:56 +01:00
Ines Montani
85ca8c2bdd Merge branch 'master' into develop 2020-12-11 13:44:41 +11:00
Ines Montani
fb43a30a71
Merge pull request #6545 from svlandeg/feature/discussions [ci skip] 2020-12-11 10:20:35 +11:00
svlandeg
5afa567767 replace gitter with discussions in 101 2020-12-10 20:17:36 +01:00
Adriane Boyd
27bb75e2a0 Docs and extras updates for v2.3.5
* Update install instructions for updated packages

* Add `cuda110` and `cuda111` extras, remove upper `cupy` pins (only
compatible with `thinc>=7.4.4`)
2020-12-10 15:34:34 +01:00
Ines Montani
513c4e332a
Include custom code via spacy package command (#6531) 2020-12-10 20:36:46 +08:00
Ines Montani
2a6043fabb
Merge pull request #6530 from explosion/feature/init-config-cpu-gpu 2020-12-10 09:38:46 +11:00
Ines Montani
9d32e839d3 Merge branch 'develop' into feature/init-config-cpu-gpu 2020-12-10 08:50:53 +11:00
Adriane Boyd
972820e2b3 Add batch_size to data formats docs 2020-12-09 12:44:04 +01:00
Adriane Boyd
80ac8af1bf Format 2020-12-09 12:44:01 +01:00
Adriane Boyd
795b5bd049
Update website/docs/api/language.md
Co-authored-by: Ines Montani <ines@ines.io>
2020-12-09 12:23:32 +01:00
Adriane Boyd
fa8fa474a3 Add nlp.batch_size setting
Add a default `batch_size` setting for `Language.pipe` and
`Language.evaluate` as `nlp.batch_size`.
2020-12-09 09:13:26 +01:00
Ines Montani
34449b66fd Update matcher.md 2020-12-09 11:09:45 +11:00
Ines Montani
1980203229 Merge branch 'master' into pr/6444 2020-12-09 11:09:40 +11:00
Ines Montani
05a2812ae0 Merge branch 'develop' into pr/6444 2020-12-09 11:04:03 +11:00
Ines Montani
758ad6c3cd Make CPU the default for init config 2020-12-09 11:00:51 +11:00
Ines Montani
8921364579
Merge pull request #6521 from explosion/feature/config-stdin
Allow reading config from stdin in spacy train
2020-12-08 22:07:43 +11:00
Ines Montani
94a5a9814f Update argument handling and documentation 2020-12-08 20:41:18 +11:00
Adriane Boyd
5ceac425ee Remove non-working --use-chars from train CLI
Remove the non-working `--use-chars` option from the train CLI. The
implementation of the option across component types and the CLI settings
could be fixed, but the `CharacterEmbed` model does not work on GPU in
v2 so it's better to remove it.
2020-12-08 08:30:00 +01:00
Ines Montani
ef59ce783b Adjust install instructions [ci skip] 2020-12-08 18:06:50 +11:00
Sofie Van Landeghem
2c27093c5f
require_cpu functionality (#6336)
* add require_cpu from Thinc 8.0.0rc2

* add docs

* fix test if cupy is not installed
2020-12-08 14:42:40 +08:00
Ines Montani
d8e01ca931
Merge pull request #6391 from adrianeboyd/docs/install-guide 2020-12-08 07:42:16 +01:00
Ines Montani
ee2ec52f48
Merge pull request #6409 from svlandeg/feature/trf-docs 2020-12-08 06:32:10 +01:00
Ines Montani
c2b196c2c1
Merge pull request #6419 from svlandeg/feature/rel-docs 2020-12-08 06:30:41 +01:00
Ines Montani
82e88f0e3b
Merge pull request #6379 from svlandeg/fix/labels-constructor 2020-12-08 06:29:56 +01:00
Adriane Boyd
1442d2f213
Improve simple training example in v3 migration (#6438)
* Create the examples once
* Use the examples in the initialization
* Provide the batch size
* Fix `begin_training` migration example
2020-11-30 09:39:45 +08:00
Adriane Boyd
03ae77e603
Add SPACY as a Matcher attribute (#6463) 2020-11-30 09:34:50 +08:00
Adriane Boyd
724831b066 Merge remote-tracking branch 'upstream/master' into chore/update-develop-from-master
* Update Macedonian for v3
* Update Turkish for v3
2020-11-25 11:49:34 +01:00
Jacob Bortell
fe9009911a Update rule-based-matching.md (#6421)
* Update rule-based-matching.md

Clarified case-sensititivy of dictionary-referencing attributes (POS/TAG/DEP/etc).

Clarified "Type" column header to "Value Type"

* Update rule-based-matching.md

Improved clarity of wording
2020-11-24 16:20:19 +01:00
Adriane Boyd
6f133877aa Update source install instructions
* Don't recommend an editable install in the default source
instructions.
* Use `pip install --no-build-isolation` for editable installs.
* Remove reference to `virtualenv`.
2020-11-24 14:44:13 +01:00
svlandeg
218abaa69a typo 2020-11-20 22:36:49 +01:00
svlandeg
e861e928df more small corrections 2020-11-20 22:29:58 +01:00
svlandeg
5ac0867427 final fixes 2020-11-20 22:18:53 +01:00
svlandeg
331ec83493 edits and updates to implementing REL component docs 2020-11-20 21:41:52 +01:00
svlandeg
4a3e611abc small fixes and formatting 2020-11-20 15:55:05 +01:00
svlandeg
124f49feb6 update REL model code 2020-11-20 15:25:20 +01:00
svlandeg
636be3c791 Merge remote-tracking branch 'upstream/develop' into feature/trf-docs 2020-11-19 14:15:35 +01:00
Sofie Van Landeghem
165993d8e5
fix typo in transformer docs (#6404) 2020-11-19 14:11:38 +01:00
Adriane Boyd
96726ec1f6
Fix DocBin init in training example (#6396) 2020-11-17 14:36:44 +01:00
Adriane Boyd
ed32fa80cd Update source install instructions
* Use `pip install` instead of `python setup.py install`
* For developers recommend:
  * `python setup.py build_ext --inplace -j N`
  * `python setup.py develop`
2020-11-16 10:13:51 +01:00
svlandeg
99d0412b6e add link to REL project 2020-11-15 18:35:56 +01:00
svlandeg
73fc1ed963 remove labels from morphologizer constructor 2020-11-11 21:48:50 +01:00
svlandeg
fcd79e0655 remove set_morphology from docs 2020-11-11 21:32:34 +01:00
Ines Montani
de6453940e
Merge pull request #6305 from svlandeg/feature/score-docs [ci skip] 2020-11-10 02:52:11 +01:00
Ines Montani
d7950c5ada
Merge pull request #6297 from adrianeboyd/docs/nightly-conda-install [ci skip] 2020-11-10 02:45:52 +01:00
svlandeg
789fb3d124 add docs for upstream argument of TransformerListener 2020-11-09 21:42:58 +01:00
Ines Montani
363ac73c72 Update docs [ci skip] 2020-11-09 12:43:26 +08:00
Adriane Boyd
8644ee3e3f
Update TIGER link and tag description (#6344) 2020-11-05 09:33:00 +01:00
Sofie Van Landeghem
8ef056cf98
fix embed_size in Entity Linker architecture (#6343) 2020-11-04 22:20:13 +01:00
Ines Montani
019a1dd5e8 Fix v3 overview [ci skip] 2020-11-03 18:10:06 +01:00
Adriane Boyd
a4b32b9552
Handle missing reference values in scorer (#6286)
* Handle missing reference values in scorer

Handle missing values in reference doc during scoring where it is
possible to detect an unset state for the attribute. If no reference
docs contain annotation, `None` is returned instead of a score. `spacy
evaluate` displays `-` for missing scores and the missing scores are
saved as `None`/`null` in the metrics.

Attributes without unset states:

* `token.head`: relies on `token.dep` to recognize unset values
* `doc.cats`: unable to handle missing annotation

Additional changes:

* add optional `has_annotation` check to `score_scans` to replace
`doc.sents` hack
* update `score_token_attr_per_feat` to handle missing and empty morph
representations
* fix bug in `Doc.has_annotation` for normalization of `IS_SENT_START`
vs. `SENT_START`

* Fix import

* Update return types
2020-11-03 15:47:18 +01:00
Adriane Boyd
dc816bba9d
Fix node name typo in dependency matcher example (#6311) 2020-10-28 16:32:46 +01:00
svlandeg
77688b0072 fix config 2020-10-26 11:14:34 +01:00
svlandeg
5878ff6bcd cleanup 2020-10-26 11:13:02 +01:00
svlandeg
e95d9caa87 small edits 2020-10-26 11:09:25 +01:00
svlandeg
a664994a81 adding score method to explanation of new component 2020-10-26 10:52:47 +01:00
Adriane Boyd
c0b76f4c19 Add install step to "Compile from source" 2020-10-23 11:36:36 +02:00
Ines Montani
b6b1c1e23c
Merge pull request #6271 from walterhenry/develop-proof [ci skip] 2020-10-19 16:31:43 +02:00
walterhenry
db24dc5614 Proofread remarks
I think these may the last remarks for the nightly docs. Only two minor things actually.
2020-10-19 11:11:32 +02:00
Sofie Van Landeghem
75a202ce65
TextCat updates and fixes (#6263)
* small fix in example imports

* throw error when train_corpus or dev_corpus is not a string

* small fix in custom logger example

* limit macro_auc to labels with 2 annotations

* fix typo

* also create parents of output_dir if need be

* update documentation of textcat scores

* refactor TextCatEnsemble

* fix tests for new AUC definition

* bump to 3.0.0a42

* update docs

* rename to spacy.TextCatEnsemble.v2

* spacy.TextCatEnsemble.v1 in legacy

* cleanup

* small fix

* update to 3.0.0rc2

* fix import that got lost in merge

* cursed IDE

* fix two typos
2020-10-18 14:50:41 +02:00
Ines Montani
c655742b8b Remove docs references to starters for now (see #6262) [ci skip] 2020-10-16 15:46:34 +02:00
Ines Montani
3851300e80 Update landing [ci skip] 2020-10-16 11:46:33 +02:00
Ines Montani
c968d1560f Fix docs example [ci skip] 2020-10-16 11:33:20 +02:00
Ines Montani
ba1e004049 Fix typo [ci skip] 2020-10-15 23:39:04 +02:00
Ines Montani
20f80587d6
Merge pull request #6257 from walterhenry/develop-proof
A few tiny typo fixes to push through with release of nightly
2020-10-15 18:17:30 +02:00
walterhenry
75b7f86383 Three small typos
Some little typos since v3.0 is out.
2020-10-15 18:06:37 +02:00
Ines Montani
09dbbe75d7 Update docs [ci skip] 2020-10-15 17:27:24 +02:00
Ines Montani
7f05ccc170 Update docs [ci skip] 2020-10-15 12:35:30 +02:00
Ines Montani
4fa869e6f7 Update docs [ci skip] 2020-10-15 11:16:06 +02:00
Ines Montani
178760855f Merge branch 'develop' into master-tmp 2020-10-15 09:06:03 +02:00