Commit Graph

11021 Commits

Author SHA1 Message Date
Matthew Honnibal
e82306937e Put Tok2Vec refactor behind feature flag (#4563)
* Add back pre-2.2.2 tok2vec

* Add simple tok2vec tests

* Add simple tok2vec tests

* Reformat

* Fix CharacterEmbed in new tok2vec

* Fix legacy tok2vec

* Resolve circular imports

* Fix test for Python 2
2019-10-31 15:01:15 +01:00
Ines Montani
828108a57f Update README.md [ci skip] 2019-10-31 13:23:25 +01:00
Ines Montani
5e9849b60f Auto-format [ci skip] 2019-10-30 19:27:18 +01:00
Ines Montani
afe4a428f7
Fix pipeline analysis on remove pipe (#4557)
Validate *after* component is removed, not before
2019-10-30 19:04:17 +01:00
Matthew Honnibal
6b874ef096 Set version to v2.2.2.dev4 2019-10-30 17:36:20 +01:00
Ines Montani
85f2b04c45
Support span._. in component decorator attrs (#4555)
* Support span._. in component decorator attrs

* Adjust error [ci skip]
2019-10-30 17:19:36 +01:00
Ines Montani
4e1de85e43 Update syntax iterators [ci skip] 2019-10-30 14:31:40 +01:00
Ines Montani
726c5dd306 Update universe.json [ci skip] 2019-10-30 13:29:00 +01:00
Neel Kamath
6c036ab57d Add "spaCy Server" to spaCy Universe (#4553)
* Add "spaCy Server" to spaCy Universe

* Accept the spaCy Contributor Agreement
2019-10-30 13:20:46 +01:00
Nipun Sadvilkar
2a5e71232b project: pySBD - Python Sentence Boundary Disambiguation (#4455)
*   project: pySBD - Python Sentence Boundary Disambiguation

* 📝  Update links and description

* 🐛  Fix missing comma

* Update universe.json

pysbd as a spacy component through entrypoints

* 🚨  Fix universe.json

* 📝  Update code_example
2019-10-30 12:13:29 +01:00
Matthew Honnibal
c2f5f9f572 Set version to v2.2.2.dev3 2019-10-29 16:37:58 +01:00
Sofie Van Landeghem
33ba9ff464 set encodings explicitly to utf8 (#4551) 2019-10-29 13:16:55 +01:00
Matthew Honnibal
9e210fa7fd
Fix tok2vec structure after model registry refactor (#4549)
The model registry refactor of the Tok2Vec function broke loading models
trained with the previous function, because the model tree was slightly
different. Specifically, the new function wrote:

    concatenate(norm, prefix, suffix, shape)

To build the embedding layer. In the previous implementation, I had used
the operator overloading shortcut:

    ( norm | prefix | suffix | shape )

This actually gets mapped to a binary association, giving something
like:

    concatenate(norm, concatenate(prefix, concatenate(suffix, shape)))

This is a different tree, so the layers iterate differently and we
loaded the weights wrongly.
2019-10-28 23:59:03 +01:00
Matthew Honnibal
bade60fe64 Set version to v2.2.2.dev1 2019-10-28 19:09:34 +01:00
Matthew Honnibal
b1505380ff Fix training with vectors 2019-10-28 18:06:38 +01:00
Matthew Honnibal
a927b3a21e Put new alignment behind flag for v2.2.2 release (#4541)
* Xfail new tokenization test

* Put new alignment behind feature flag

* Move USE_ALIGN to top of the file [ci skip]


Co-authored-by: Ines Montani <ines@ines.io>
2019-10-28 16:12:32 +01:00
Ines Montani
a90025b277
Fix serialization of extension attr values in DocBin (#4540) 2019-10-28 16:02:13 +01:00
tamuhey
df293f3894 modified gold.align to handle space tokens (#4537)
Co-authored-by: Matthew Honnibal <honnibal+gh@gmail.com>
2019-10-28 15:44:28 +01:00
adrianeboyd
f2bfaa1b38 Filter subtoken matches in merge_subtokens() (#4539)
The `Matcher` in `merge_subtokens()` returns all possible subsequences
of `subtok`, so for sequences of two or more subtoks it's necessary to
filter the matches so that the retokenizer is only merging the longest
matches with no overlapping spans.
2019-10-28 15:40:28 +01:00
Matthew Honnibal
d5509e0989 Support Mish activation (requires Thinc 7.3) (#4536)
* Add arch for MishWindowEncoder

* Support mish in tok2vec and conv window >=2

* Pass new tok2vec settings from parser

* Syntax error

* Fix tok2vec setting

* Fix registration of MishWindowEncoder

* Fix receptive field setting

* Fix mish arch

* Pass more options from parser

* Support more tok2vec options in pretrain

* Require thinc 7.3

* Add docs [ci skip]

* Require thinc 7.3.0.dev0 to run CI

* Run black

* Fix typo

* Update Thinc version


Co-authored-by: Ines Montani <ines@ines.io>
2019-10-28 15:16:33 +01:00
Ines Montani
96bb8f2187 Add regression test for #4528 [ci skip] 2019-10-28 14:36:03 +01:00
Matthew Honnibal
02e8adf2c2 Add the spacy_lookups_data to pex file 2019-10-28 14:03:35 +01:00
Ines Montani
c5e41247e8 Tidy up and auto-format 2019-10-28 12:43:55 +01:00
Ines Montani
92018b9cd4 Tidy up and auto-format 2019-10-28 12:36:23 +01:00
Matthew Honnibal
f0ec7bcb79
Flag to ignore examples with mismatched raw/gold text (#4534)
* Flag to ignore examples with mismatched raw/gold text

After #4525, we're seeing some alignment failures on our OntoNotes data. I think we actually have fixes for most of these cases.

In general it's better to fix the data, but it seems good to allow the GoldCorpus class to just skip cases where the raw text doesn't
match up to the gold words. I think previously we were silently ignoring these cases.

* Try to fix test on Python 2.7
2019-10-28 11:40:12 +01:00
Matthew Honnibal
795699015c
Clarify parser model CPU/GPU code (#4535)
The previous version worked with previous thinc, but only
because some thinc ops happened to have gpu/cpu compatible
implementations. It's better to call the right Ops instance.
2019-10-27 23:43:09 +01:00
Matthw Honnibal
46eecdcb70 Remove print 2019-10-27 22:24:19 +01:00
Matthw Honnibal
426b745640 Fix tests for gpu 2019-10-27 22:19:18 +01:00
Matthw Honnibal
165e378082 Fix tok2vec arch after refactor 2019-10-27 22:19:10 +01:00
Matthew Honnibal
f8d740bfb1
Fix --gold-preproc train cli command (#4392)
* Fix get labels for textcat

* Fix char_embed for gpu

* Revert "Fix char_embed for gpu"

This reverts commit 055b9a9e85.

* Fix passing of cats in gold.pyx

* Revert "Match pop with append for training format (#4516)"

This reverts commit 8e7414dace.

* Fix popping gold parses

* Fix handling of cats in gold tuples

* Fix name

* Fix ner_multitask_objective script

* Add test for 4402
2019-10-27 21:58:50 +01:00
Sofie Van Landeghem
8e7414dace Match pop with append for training format (#4516)
* trying to fix script - not succesful yet

* match pop() with extend() to avoid changing the data

* few more pop-extend fixes

* reinsert deleted print statement

* fix print statement

* add last tested version

* append instead of extend

* add in few comments

* quick fix for 4402 + unit test

* fixing number of docs (not counting cats)

* more fixes

* fix len

* print tmp file instead of using data from examples dir

* print tmp file instead of using data from examples dir (2)
2019-10-27 16:01:32 +01:00
tamuhey
fcd25db033 [#4529] fix: gold pyx (#4530)
* fix: gold pyx

* remove print

* skip test in python2

* Add unicode declarations and don't skip test on Python 2
2019-10-27 13:50:07 +01:00
Matthew Honnibal
bddfbc7e1b Restore missing normalization from gold align
PR #4526 missed extra lower-casing and spacing normalization.
2019-10-27 13:47:08 +01:00
tamuhey
554850206c [#4525] fix gold.align (#4526)
* fix: gold.align

* fix align

* remove old align
2019-10-27 13:38:04 +01:00
Ines Montani
a9c6104047 Component decorator and component analysis (#4517)
* Add work in progress

* Update analysis helpers and component decorator

* Fix porting of docstrings for Python 2

* Fix docstring stuff on Python 2

* Support meta factories when loading model

* Put auto pipeline analysis behind flag for now

* Analyse pipes on remove_pipe and replace_pipe

* Move analysis to root for now

Try to find a better place for it, but it needs to go for now to avoid circular imports

* Simplify decorator

Don't return a wrapped class and instead just write to the object

* Update existing components and factories

* Add condition in factory for classes vs. functions

* Add missing from_nlp classmethods

* Add "retokenizes" to printed overview

* Update assigns/requires declarations of builtins

* Only return data if no_print is enabled

* Use multiline table for overview

* Don't support Span

* Rewrite errors/warnings and move them to spacy.errors
2019-10-27 13:35:49 +01:00
Ines Montani
1180304449 Update languages.json [ci skip] 2019-10-26 13:51:42 +02:00
Matthew Honnibal
406eb95a47
Refactor Tok2Vec to use architecture registry (#4518)
* Add refactored tok2vec, using register_architecture

* Refactor Tok2Vec

* Fix ml

* Fix new tok2vec

* Move make_layer to util

* Add wire

* Fix missing import
2019-10-25 22:28:20 +02:00
Sofie Van Landeghem
99e309bb19 fix nn parser sample construction (#4524) 2019-10-25 22:26:42 +02:00
Ines Montani
cfffdba7b1 Implement new API for {Phrase}Matcher.add (backwards-compatible) (#4522)
* Implement new API for {Phrase}Matcher.add (backwards-compatible)

* Update docs

* Also update DependencyMatcher.add

* Update internals

* Rewrite tests to use new API

* Add basic check for common mistake

Raise error with suggestion if user likely passed in a pattern instead of a list of patterns

* Fix typo [ci skip]
2019-10-25 22:21:08 +02:00
Ines Montani
d2da117114 Also support passing list to Language.disable_pipes (#4521)
* Also support passing list to Language.disable_pipes

* Adjust internals
2019-10-25 16:19:08 +02:00
Ines Montani
1185702993 Port over contributor agreement from spacy-lookups-data [ci skip] 2019-10-25 13:06:10 +02:00
Ines Montani
493be8e9db Update new version identifier [ci skip] 2019-10-25 11:42:49 +02:00
Ines Montani
2abf1028cb Update docs [ci skip] 2019-10-25 11:27:00 +02:00
Ines Montani
e91366a216 Adjust formatting [ci skip] 2019-10-25 11:25:44 +02:00
Ines Montani
f31876154d Adjust formatting [ci skip] 2019-10-25 11:19:46 +02:00
Kabir Khan
93640373c7 Make entity_ruler ent_id resolution 2x faster and add docs for… (#4513)
* Update entityruler.py

* Making ent_id resolution 2x faster and adding docs

* Fixing newlines in docstrings

* Fixing newlines in docstrings
2019-10-25 11:16:42 +02:00
Ines Montani
cc05d9dad6 Auto-format [ci skip] 2019-10-24 16:21:08 +02:00
Ines Montani
73dc63d3bf Tidy up and auto-format [ci skip] 2019-10-24 16:20:48 +02:00
Ines Montani
6dd2832438 Use numpy.frombuffer instead of fromstring
Deprecation warning says we should do this
2019-10-24 16:18:41 +02:00
Ines Montani
9a849fe54e Explicitly catch warning in test 2019-10-24 16:16:27 +02:00