Commit Graph

6620 Commits

Author SHA1 Message Date
Ines Montani
b570d5d2ed Increment version [ci skip] 2019-11-21 17:02:32 +01:00
Matthew Honnibal
50f89cb85d Make vectors.find() return keys in correct order (#4691)
* Make vectors.find() return keys in correct order

* Update spacy/vectors.pyx
2019-11-21 16:58:32 +01:00
Ines Montani
5d4eede1e4 Fix test util imports 2019-11-21 16:28:29 +01:00
GuiGel
8f7ab70870 Bugfix/fix entity ruler from disk (#4670)
* fix EntityRuler from_disk bug

* add contributor file

* Test EntityRuler PhraseMatcher deserialization (#4651)

* newline at end of file

* fix copy paste error

* serializing the EntityRuler by itself

* Add unicode declarations for Python 2 and auto-format
2019-11-21 16:26:37 +01:00
adrianeboyd
054df5d90a Add error for non-string labels (#4690)
Add error when attempting to add non-string labels to `Tagger` or
`TextCategorizer`.
2019-11-21 16:24:10 +01:00
adrianeboyd
d7f32b285c Detect more empty matches in tokenizer.explain() (#4675)
* Detect more empty matches in tokenizer.explain()

* Include a few languages in explain non-slow tests

Mark a few languages in tokenizer.explain() tests as not slow so they're
run by default.
2019-11-20 16:31:29 +01:00
Ines Montani
5bf9ab5b03 Tidy up and auto-format 2019-11-20 13:16:33 +01:00
Ines Montani
7f3b00164a Re-add slow marker 2019-11-20 13:15:59 +01:00
Ines Montani
6e303de717 Auto-format 2019-11-20 13:15:24 +01:00
Ines Montani
2e7c896fe5 Update Tokenizer.explain tests 2019-11-20 13:14:11 +01:00
adrianeboyd
2c876eb672 Add tokenizer explain() debugging method (#4596)
* Expose tokenizer rules as a property

Expose the tokenizer rules property in the same way as the other core
properties. (The cache resetting is overkill, but consistent with
`from_bytes` for now.)

Add tests and update Tokenizer API docs.

* Update Hungarian punctuation to remove empty string

Update Hungarian punctuation definitions so that `_units` does not match
an empty string.

* Use _load_special_tokenization consistently

Use `_load_special_tokenization()` and have it to handle `None` checks.

* Fix precedence of `token_match` vs. special cases

Remove `token_match` check from `_split_affixes()` so that special cases
have precedence over `token_match`. `token_match` is checked only before
infixes are split.

* Add `make_debug_doc()` to the Tokenizer

Add `make_debug_doc()` to the Tokenizer as a working implementation of
the pseudo-code in the docs.

Add a test (marked as slow) that checks that `nlp.tokenizer()` and
`nlp.tokenizer.make_debug_doc()` return the same non-whitespace tokens
for all languages that have `examples.sentences` that can be imported.

* Update tokenization usage docs

Update pseudo-code and algorithm description to correspond to
`nlp.tokenizer.make_debug_doc()` with example debugging usage.

Add more examples for customizing tokenizers while preserving the
existing defaults.

Minor edits / clarifications.

* Revert "Update Hungarian punctuation to remove empty string"

This reverts commit f0a577f7a5.

* Rework `make_debug_doc()` as `explain()`

Rework `make_debug_doc()` as `explain()`, which returns a list of
`(pattern_string, token_string)` tuples rather than a non-standard
`Doc`. Update docs and tests accordingly, leaving the visualization for
future work.

* Handle cases with bad tokenizer patterns

Detect when tokenizer patterns match empty prefixes and suffixes so that
`explain()` does not hang on bad patterns.

* Remove unused displacy image

* Add tokenizer.explain() to usage docs
2019-11-20 13:07:25 +01:00
Matthew Honnibal
a3c43a1692
Support no hidden layer in parser and NER (#4672)
* Support no hidden layers for parser

* Fix parser model for depth 1

* Fix parser for hidden depth=0

* Add option of non-blocking to CUDA stream
2019-11-19 15:54:34 +01:00
Matthew Honnibal
4b123952aa
Add option for improved NER feature extraction (#4671)
* Support option of three NER features

* Expose nr_feature parser model setting

* Give feature tokens better name

* Test nr_feature=3 for NER

* Format
2019-11-19 15:03:14 +01:00
Elijah Rippeth
5ad5c4b44a Add initial Korean support (#4660)
* add hangul and jamo char classes.

* add initial Korean lexical attributes.

* add contributor agreement
2019-11-18 12:56:07 +01:00
Ines Montani
74b951fe61
Fix xpassing tests (#4657)
* Ignore internal warnings

* Un-xfail passing tests

* Skip instead of xfail
2019-11-16 20:20:53 +01:00
Ines Montani
3bd15055ce
Fix bug in Language.evaluate for components without .pipe (#4662) 2019-11-16 20:20:37 +01:00
adrianeboyd
bdfb696677 Fix conllu2json converter to output all sentences (#4656)
Make sure that the last batch of sentences is output if n_sents > 1.
2019-11-15 17:08:32 +01:00
Ines Montani
d64cfce546 Remove unnecessary newline replace 2019-11-15 16:19:01 +01:00
Christoph Purschke
433748e867 Fix basic language support for Luxembourgish (by adding punctuation.py) (#4648)
* Update __init__.py

* Create punctuation.py

* Update tokenizer_exceptions.py

* Create questoph.md

* Update questoph.md

* Update test_text.py

* Update test_text.py

* Update test_text.py

* Update test_text.py
2019-11-15 16:16:47 +01:00
adrianeboyd
91f89f9693 Fix realloc in retokenizer.split() (#4606)
Always realloc to a size larger than `doc.max_length` in
`retokenizer.split()` (or cymem will throw errors).
2019-11-11 16:26:46 +01:00
adrianeboyd
0b9a5f4074 Rework Chinese language initialization and tokenization (#4619)
* Rework Chinese language initialization

* Create a `ChineseTokenizer` class
  * Modify jieba post-processing to handle whitespace correctly
  * Modify non-jieba character tokenization to handle whitespace correctly

* Add a `create_tokenizer()` method to `ChineseDefaults`

* Load lexical attributes

* Update Chinese tag_map for UD v2

* Add very basic Chinese tests

* Test tokenization with and without jieba

* Test `like_num` attribute

* Fix try_jieba_import()

* Fix zh code formatting
2019-11-11 14:23:21 +01:00
adrianeboyd
4d85f67eee Minor updates to language example sentences (#4608)
* Add punctuation to Spanish example sentences

* Combine multilanguage examples for lang xx

* Add punctuation to nb examples
2019-11-07 22:34:58 +01:00
Priscilla de Abreu Lopes
39e79fcc86 Bugfix/dep matcher issue 4590 (#4601)
* add contributor agreement for prilopes

* add test for issue #4590

* fix on_match params for DependencyMacther (#4590)
2019-11-07 12:01:06 +01:00
Ines Montani
09cec3e41b
Replace function registries with catalogue (#4584)
* Replace functions registries with catalogue

* Update __init__.py

* Fix test

* Revert unrelated flag [ci skip]
2019-11-07 11:45:22 +01:00
Matthew Honnibal
4e43c0ba93 Fix multiprocessing for as_tuples=True (#4582) 2019-11-04 20:29:03 +01:00
Ines Montani
cf4ec88b38 Use latest wasabi 2019-11-04 02:38:45 +01:00
Ines Montani
6ec119d976 Add error in debug-data if no dev docs are available (see #4575) 2019-11-02 16:08:11 +01:00
adrianeboyd
56ad3a3988 Add LAS per dependency to Scorer (#4560) 2019-10-31 21:18:16 +01:00
Matthew Honnibal
de98d66f87 Set version to v2.2.2 2019-10-31 15:53:31 +01:00
Matthw Honnibal
55f2241d72 Merge branch 'master' of https://github.com/explosion/spaCy 2019-10-31 15:37:52 +01:00
Ines Montani
df4c9ae3dc Fix formatting [ci skip] 2019-10-31 15:10:25 +01:00
Ines Montani
59358d9b71
Remove box-decoration-break from entities in displacy (#4564) 2019-10-31 15:09:43 +01:00
Matthw Honnibal
8b9954d1b7 Set version to v2.2.2.dev5 2019-10-31 15:06:19 +01:00
Ines Montani
2c107f02a4 Auto-format [ci skip] 2019-10-31 15:01:56 +01:00
Matthew Honnibal
e82306937e Put Tok2Vec refactor behind feature flag (#4563)
* Add back pre-2.2.2 tok2vec

* Add simple tok2vec tests

* Add simple tok2vec tests

* Reformat

* Fix CharacterEmbed in new tok2vec

* Fix legacy tok2vec

* Resolve circular imports

* Fix test for Python 2
2019-10-31 15:01:15 +01:00
Ines Montani
5e9849b60f Auto-format [ci skip] 2019-10-30 19:27:18 +01:00
Ines Montani
afe4a428f7
Fix pipeline analysis on remove pipe (#4557)
Validate *after* component is removed, not before
2019-10-30 19:04:17 +01:00
Matthew Honnibal
6b874ef096 Set version to v2.2.2.dev4 2019-10-30 17:36:20 +01:00
Ines Montani
85f2b04c45
Support span._. in component decorator attrs (#4555)
* Support span._. in component decorator attrs

* Adjust error [ci skip]
2019-10-30 17:19:36 +01:00
Matthew Honnibal
c2f5f9f572 Set version to v2.2.2.dev3 2019-10-29 16:37:58 +01:00
Sofie Van Landeghem
33ba9ff464 set encodings explicitly to utf8 (#4551) 2019-10-29 13:16:55 +01:00
Matthew Honnibal
9e210fa7fd
Fix tok2vec structure after model registry refactor (#4549)
The model registry refactor of the Tok2Vec function broke loading models
trained with the previous function, because the model tree was slightly
different. Specifically, the new function wrote:

    concatenate(norm, prefix, suffix, shape)

To build the embedding layer. In the previous implementation, I had used
the operator overloading shortcut:

    ( norm | prefix | suffix | shape )

This actually gets mapped to a binary association, giving something
like:

    concatenate(norm, concatenate(prefix, concatenate(suffix, shape)))

This is a different tree, so the layers iterate differently and we
loaded the weights wrongly.
2019-10-28 23:59:03 +01:00
Matthew Honnibal
bade60fe64 Set version to v2.2.2.dev1 2019-10-28 19:09:34 +01:00
Matthew Honnibal
b1505380ff Fix training with vectors 2019-10-28 18:06:38 +01:00
Matthew Honnibal
a927b3a21e Put new alignment behind flag for v2.2.2 release (#4541)
* Xfail new tokenization test

* Put new alignment behind feature flag

* Move USE_ALIGN to top of the file [ci skip]


Co-authored-by: Ines Montani <ines@ines.io>
2019-10-28 16:12:32 +01:00
Ines Montani
a90025b277
Fix serialization of extension attr values in DocBin (#4540) 2019-10-28 16:02:13 +01:00
tamuhey
df293f3894 modified gold.align to handle space tokens (#4537)
Co-authored-by: Matthew Honnibal <honnibal+gh@gmail.com>
2019-10-28 15:44:28 +01:00
adrianeboyd
f2bfaa1b38 Filter subtoken matches in merge_subtokens() (#4539)
The `Matcher` in `merge_subtokens()` returns all possible subsequences
of `subtok`, so for sequences of two or more subtoks it's necessary to
filter the matches so that the retokenizer is only merging the longest
matches with no overlapping spans.
2019-10-28 15:40:28 +01:00
Matthew Honnibal
d5509e0989 Support Mish activation (requires Thinc 7.3) (#4536)
* Add arch for MishWindowEncoder

* Support mish in tok2vec and conv window >=2

* Pass new tok2vec settings from parser

* Syntax error

* Fix tok2vec setting

* Fix registration of MishWindowEncoder

* Fix receptive field setting

* Fix mish arch

* Pass more options from parser

* Support more tok2vec options in pretrain

* Require thinc 7.3

* Add docs [ci skip]

* Require thinc 7.3.0.dev0 to run CI

* Run black

* Fix typo

* Update Thinc version


Co-authored-by: Ines Montani <ines@ines.io>
2019-10-28 15:16:33 +01:00
Ines Montani
96bb8f2187 Add regression test for #4528 [ci skip] 2019-10-28 14:36:03 +01:00
Ines Montani
c5e41247e8 Tidy up and auto-format 2019-10-28 12:43:55 +01:00
Ines Montani
92018b9cd4 Tidy up and auto-format 2019-10-28 12:36:23 +01:00
Matthew Honnibal
f0ec7bcb79
Flag to ignore examples with mismatched raw/gold text (#4534)
* Flag to ignore examples with mismatched raw/gold text

After #4525, we're seeing some alignment failures on our OntoNotes data. I think we actually have fixes for most of these cases.

In general it's better to fix the data, but it seems good to allow the GoldCorpus class to just skip cases where the raw text doesn't
match up to the gold words. I think previously we were silently ignoring these cases.

* Try to fix test on Python 2.7
2019-10-28 11:40:12 +01:00
Matthew Honnibal
795699015c
Clarify parser model CPU/GPU code (#4535)
The previous version worked with previous thinc, but only
because some thinc ops happened to have gpu/cpu compatible
implementations. It's better to call the right Ops instance.
2019-10-27 23:43:09 +01:00
Matthw Honnibal
46eecdcb70 Remove print 2019-10-27 22:24:19 +01:00
Matthw Honnibal
426b745640 Fix tests for gpu 2019-10-27 22:19:18 +01:00
Matthw Honnibal
165e378082 Fix tok2vec arch after refactor 2019-10-27 22:19:10 +01:00
Matthew Honnibal
f8d740bfb1
Fix --gold-preproc train cli command (#4392)
* Fix get labels for textcat

* Fix char_embed for gpu

* Revert "Fix char_embed for gpu"

This reverts commit 055b9a9e85.

* Fix passing of cats in gold.pyx

* Revert "Match pop with append for training format (#4516)"

This reverts commit 8e7414dace.

* Fix popping gold parses

* Fix handling of cats in gold tuples

* Fix name

* Fix ner_multitask_objective script

* Add test for 4402
2019-10-27 21:58:50 +01:00
Sofie Van Landeghem
8e7414dace Match pop with append for training format (#4516)
* trying to fix script - not succesful yet

* match pop() with extend() to avoid changing the data

* few more pop-extend fixes

* reinsert deleted print statement

* fix print statement

* add last tested version

* append instead of extend

* add in few comments

* quick fix for 4402 + unit test

* fixing number of docs (not counting cats)

* more fixes

* fix len

* print tmp file instead of using data from examples dir

* print tmp file instead of using data from examples dir (2)
2019-10-27 16:01:32 +01:00
tamuhey
fcd25db033 [#4529] fix: gold pyx (#4530)
* fix: gold pyx

* remove print

* skip test in python2

* Add unicode declarations and don't skip test on Python 2
2019-10-27 13:50:07 +01:00
Matthew Honnibal
bddfbc7e1b Restore missing normalization from gold align
PR #4526 missed extra lower-casing and spacing normalization.
2019-10-27 13:47:08 +01:00
tamuhey
554850206c [#4525] fix gold.align (#4526)
* fix: gold.align

* fix align

* remove old align
2019-10-27 13:38:04 +01:00
Ines Montani
a9c6104047 Component decorator and component analysis (#4517)
* Add work in progress

* Update analysis helpers and component decorator

* Fix porting of docstrings for Python 2

* Fix docstring stuff on Python 2

* Support meta factories when loading model

* Put auto pipeline analysis behind flag for now

* Analyse pipes on remove_pipe and replace_pipe

* Move analysis to root for now

Try to find a better place for it, but it needs to go for now to avoid circular imports

* Simplify decorator

Don't return a wrapped class and instead just write to the object

* Update existing components and factories

* Add condition in factory for classes vs. functions

* Add missing from_nlp classmethods

* Add "retokenizes" to printed overview

* Update assigns/requires declarations of builtins

* Only return data if no_print is enabled

* Use multiline table for overview

* Don't support Span

* Rewrite errors/warnings and move them to spacy.errors
2019-10-27 13:35:49 +01:00
Matthew Honnibal
406eb95a47
Refactor Tok2Vec to use architecture registry (#4518)
* Add refactored tok2vec, using register_architecture

* Refactor Tok2Vec

* Fix ml

* Fix new tok2vec

* Move make_layer to util

* Add wire

* Fix missing import
2019-10-25 22:28:20 +02:00
Sofie Van Landeghem
99e309bb19 fix nn parser sample construction (#4524) 2019-10-25 22:26:42 +02:00
Ines Montani
cfffdba7b1 Implement new API for {Phrase}Matcher.add (backwards-compatible) (#4522)
* Implement new API for {Phrase}Matcher.add (backwards-compatible)

* Update docs

* Also update DependencyMatcher.add

* Update internals

* Rewrite tests to use new API

* Add basic check for common mistake

Raise error with suggestion if user likely passed in a pattern instead of a list of patterns

* Fix typo [ci skip]
2019-10-25 22:21:08 +02:00
Ines Montani
d2da117114 Also support passing list to Language.disable_pipes (#4521)
* Also support passing list to Language.disable_pipes

* Adjust internals
2019-10-25 16:19:08 +02:00
Ines Montani
e91366a216 Adjust formatting [ci skip] 2019-10-25 11:25:44 +02:00
Ines Montani
f31876154d Adjust formatting [ci skip] 2019-10-25 11:19:46 +02:00
Kabir Khan
93640373c7 Make entity_ruler ent_id resolution 2x faster and add docs for… (#4513)
* Update entityruler.py

* Making ent_id resolution 2x faster and adding docs

* Fixing newlines in docstrings

* Fixing newlines in docstrings
2019-10-25 11:16:42 +02:00
Ines Montani
cc05d9dad6 Auto-format [ci skip] 2019-10-24 16:21:08 +02:00
Ines Montani
73dc63d3bf Tidy up and auto-format [ci skip] 2019-10-24 16:20:48 +02:00
Ines Montani
6dd2832438 Use numpy.frombuffer instead of fromstring
Deprecation warning says we should do this
2019-10-24 16:18:41 +02:00
Ines Montani
9a849fe54e Explicitly catch warning in test 2019-10-24 16:16:27 +02:00
adrianeboyd
1b0bbe4b76 Update tag maps and docs for English and German (#4501)
* Update English tag_map

Update English tag_map based on this conversion table:
https://universaldependencies.org/tagset-conversion/en-penn-uposf.html

* Update German tag_map

Update German tag_map based on this conversion table:
https://universaldependencies.org/tagset-conversion/de-stts-uposf.html

* Add missing Tiger dependencies to glossary

* Add quotes to definition of TO

* Update POS/TAG tables in docs

Update POS/TAG tables for English and German docs using current
information generated from the tag_maps and GLOSSARY.

* Update warning that -PRON- is specific to English

* Revert docs to default JSON output with convert

* Revert "Revert docs to default JSON output with convert"

This reverts commit 6b78c048f1.
2019-10-24 12:56:05 +02:00
Zhuoru Lin
10d88b09bb Bugfix/fix wikidata train entity linker (#4509)
* Fix labels_discard Nonetype iteration error

* Contributor agreement for Zhuoru Lin

* Enhance EntityLinker.predict() to handle labels_discard is None case.
2019-10-24 12:52:59 +02:00
adrianeboyd
8516e9d53b Support train dict format as JSONL (#4471)
* Support train dict format as JSONL

* Add (overly simple) check for dict vs. tuple to read JSONL lines as
either train dicts or train tuples

* Extend JSON/JSONL roundtrip conversion tests using `docs_to_json()`
and `GoldCorpus.train_tuples`

* Revert docs to default JSON output with convert
2019-10-23 16:01:44 +02:00
Matthew Honnibal
ca7f0e669e Set version to v2.2.2.dev1 2019-10-22 20:11:25 +02:00
Matthew Honnibal
9489c5f6b2 Clip most_similar to range [-1, 1] (fixes #4506) (#4507)
* Clip most_similar to range [-1, 1]

* Add/fix vectors tests

* Fix test
2019-10-22 20:10:42 +02:00
Ines Montani
74a19aeb1c Add xfailing test [ci skip] 2019-10-22 18:18:43 +02:00
Matthew Honnibal
3f6cb618a9 Set version to v2.2.2.dev0 2019-10-22 17:47:36 +02:00
Sofie Van Landeghem
48886afc78 prevent zero-length mem alloc (#4429)
* raise specific error when removing a matcher rule that doesn't exist

* rephrasing

* goldparse init: allocate fields only if doc is not empty

* avoid zero length alloc in saving tokenizer cache

* avoid allocating zero length mem in matcher

* asserts to avoid allocating zero length mem

* fix zero-length allocation in matcher

* bump cymem version

* revert cymem version bump
2019-10-22 16:54:33 +02:00
adrianeboyd
3dfc764577 Free pointers in parser activations (#4486)
* Free pointers in ActivationsC

* Restructure alloc/free for parser activations

* Rewrite/restructure to have allocation and free in parallel functions
in `_parser_model` rather than partially in `_parseC()` in `Parser`.

* Remove `resize_activations` from `_parser_model.pxd`.
2019-10-22 15:06:44 +02:00
tamuhey
fb89f6792b refactor: remove unused variable (#4499) 2019-10-22 14:38:17 +02:00
gustavengstrom
050e2445a8 Adding noun_chunks to the Swedish language model (sv) (#4422)
* Create syntax_iterators.py

Replica of spacy/lang/fr/syntax_iterators.py

* Added import statements for SYNTAX_ITERATORS

* Create gustavengstrom.md

* Added "dobj" to list of labels in noun_chunks method and a test_noun_chunks method to the  Swedish language model.

* Delete README-checkpoint.md


Co-authored-by: Gustav <gustav@davcon.se>
Co-authored-by: Ines Montani <ines@ines.io>
2019-10-21 12:57:06 +02:00
adrianeboyd
f5c551a43a Checks/errors related to ill-formed IOB input in CLI convert and debug-data (#4487)
* Error for ill-formed input to iob_to_biluo()

Check for empty label in iob_to_biluo(), which can result from
ill-formed input.

* Check for empty NER label in debug-data
2019-10-21 12:20:28 +02:00
Sofie Van Landeghem
d5d55312b2 prevent division by zero in most_similar method (#4488) 2019-10-21 12:04:46 +02:00
Pepe Berba
7772d5d3c5 Update vocab.get_vector docs to include features on Fasttext ngram (#4464)
* Update `vocab.get_vector`

* Added contrib agreement
2019-10-20 01:28:18 +02:00
Ines Montani
2c96a5e5b0
Remove lemma attrs on BaseDefaults (#4468) 2019-10-19 23:18:09 +02:00
adrianeboyd
8d3de90bc4 Suppress convert output if writing to stdout (#4472) 2019-10-18 18:12:59 +02:00
Ines Montani
692d7f4291 Fix formatting [ci skip] 2019-10-18 11:33:38 +02:00
Ines Montani
181c01f629 Tidy up and auto-format 2019-10-18 11:27:38 +02:00
Ines Montani
fb11852750 Remove unused imports 2019-10-18 11:06:41 +02:00
adrianeboyd
d359da9687 Replace Entity/MatchStruct with SpanC (#4459)
* Replace MatchStruct with Entity

Replace MatchStruct with Entity since the existing Entity struct is
nearly identical.

* Replace Entity with more general SpanC
2019-10-18 11:01:47 +02:00
adrianeboyd
29e3da6493 Add missing cats to gold annot_tuples in Scorer (#4466)
Add missing `cats` in `Scorer` call to `GoldParse.from_annot_tuples()`
when the `doc` and `gold` have differing lengths.
2019-10-18 11:00:02 +02:00
adrianeboyd
135e3de531 Check for docs with 2+ sentences in debug-data (#4467) 2019-10-18 10:59:16 +02:00
Daniel King
e646956176 Most similar bug (#4446)
* Add batch size indexing

* Don't sort if n == 1

* Add test for most similar vectors issue

* Change > to >=
2019-10-16 23:18:55 +02:00
Anastassia
4a77d03ff7 Fix documentation for the docs_to_json function (#4456) 2019-10-16 23:17:58 +02:00
adrianeboyd
275c9ad872 Allow int values in token patterns (#4444)
* Add missing int value option to top-level pattern validation in Matcher

* Adjust existing tests accordingly

* Add new test for valid pattern `{"LENGTH": int}`
2019-10-16 13:40:18 +02:00
Sofie Van Landeghem
7d1efac4eb Fix remove pattern from matcher (#4454)
* raise specific error when removing a matcher rule that doesn't exist

* rephrasing

* bugfix in remove matcher + extended unit test
2019-10-16 13:34:58 +02:00