Commit Graph

169 Commits

Author SHA1 Message Date
Ines Montani
f37863093a 💫 Replace ujson, msgpack and dill/pickle/cloudpickle with srsly (#3003)
Remove hacks and wrappers, keep code in sync across our libraries and move spaCy a few steps closer to only depending on packages with binary wheels 🎉

See here: https://github.com/explosion/srsly

    Serialization is hard, especially across Python versions and multiple platforms. After dealing with many subtle bugs over the years (encodings, locales, large files) our libraries like spaCy and Prodigy have steadily grown a number of utility functions to wrap the multiple serialization formats we need to support (especially json, msgpack and pickle). These wrapping functions ended up duplicated across our codebases, so we wanted to put them in one place.

    At the same time, we noticed that having a lot of small dependencies was making maintainence harder, and making installation slower. To solve this, we've made srsly standalone, by including the component packages directly within it. This way we can provide all the serialization utilities we need in a single binary wheel.

    srsly currently includes forks of the following packages:

        ujson
        msgpack
        msgpack-numpy
        cloudpickle



* WIP: replace json/ujson with srsly

* Replace ujson in examples

Use regular json instead of srsly to make code easier to read and follow

* Update requirements

* Fix imports

* Fix typos

* Replace msgpack with srsly

* Fix warning
2018-12-03 01:28:22 +01:00
Matthew Honnibal
d9d339186b Fix dropout and batch-size defaults 2018-12-01 13:42:35 +00:00
Matthew Honnibal
3139b020b5 Fix train script 2018-11-30 22:17:08 +00:00
Ines Montani
37c7c85a86 💫 New JSON helpers, training data internals & CLI rewrite (#2932)
* Support nowrap setting in util.prints

* Tidy up and fix whitespace

* Simplify script and use read_jsonl helper

* Add JSON schemas (see #2928)

* Deprecate Doc.print_tree

Will be replaced with Doc.to_json, which will produce a unified format

* Add Doc.to_json() method (see #2928)

Converts Doc objects to JSON using the same unified format as the training data. Method also supports serializing selected custom attributes in the doc._. space.

* Remove outdated test

* Add write_json and write_jsonl helpers

* WIP: Update spacy train

* Tidy up spacy train

* WIP: Use wasabi for formatting

* Add GoldParse helpers for JSON format

* WIP: add debug-data command

* Fix typo

* Add missing import

* Update wasabi pin

* Add missing import

* 💫 Refactor CLI (#2943)

To be merged into #2932.

## Description
- [x] refactor CLI To use [`wasabi`](https://github.com/ines/wasabi)
- [x] use [`black`](https://github.com/ambv/black) for auto-formatting
- [x] add `flake8` config
- [x] move all messy UD-related scripts to `cli.ud`
- [x] make converters function that take the opened file and return the converted data (instead of having them handle the IO)

### Types of change
enhancement

## Checklist
<!--- Before you submit the PR, go over this checklist and make sure you can
tick off all the boxes. [] -> [x] -->
- [x] I have submitted the spaCy Contributor Agreement.
- [x] I ran the tests, and all new and existing tests passed.
- [x] My changes don't require a change to the documentation, or if they do, I've added all required information.

* Update wasabi pin

* Delete old test

* Update errors

* Fix typo

* Tidy up and format remaining code

* Fix formatting

* Improve formatting of messages

* Auto-format remaining code

* Add tok2vec stuff to spacy.train

* Fix typo

* Update wasabi pin

* Fix path checks for when train() is called as function

* Reformat and tidy up pretrain script

* Update argument annotations

* Raise error if model language doesn't match lang

* Document new train command
2018-11-30 20:16:14 +01:00
Matthew Honnibal
ef0820827a
Update hyper-parameters after NER random search (#2972)
These experiments were completed a few weeks ago, but I didn't make the PR, pending model release.

    Token vector width: 128->96
    Hidden width: 128->64
    Embed size: 5000->2000
    Dropout: 0.2->0.1
    Updated optimizer defaults (unclear how important?)

This should improve speed, model size and load time, while keeping
similar or slightly better accuracy.

The tl;dr is we prefer to prevent over-fitting by reducing model size,
rather than using more dropout.
2018-11-27 18:49:52 +01:00
Matthew Honnibal
2874b8efd8 Fix tok2vec loading in spacy train 2018-11-15 23:34:54 +00:00
Matthew Honnibal
8fdb9bc278
💫 Add experimental ULMFit/BERT/Elmo-like pretraining (#2931)
* Add 'spacy pretrain' command

* Fix pretrain command for Python 2

* Fix pretrain command

* Fix pretrain command
2018-11-15 22:17:16 +01:00
Matthew Honnibal
595c893791 Expose noise_level option in train CLI 2018-08-16 00:41:44 +02:00
Matthew Honnibal
4336397ecb Update develop from master 2018-08-14 03:04:28 +02:00
Xiaoquan Kong
f0c9652ed1 New Feature: display more detail when Error E067 (#2639)
* Fix off-by-one error

* Add verbose option

* Update verbose option

* Update documents for verbose option
2018-08-07 10:45:29 +02:00
Matthew Honnibal
c83fccfe2a Fix output of best model 2018-06-25 23:05:56 +02:00
Matthew Honnibal
c4698f5712 Don't collate model unless training succeeds 2018-06-25 16:36:42 +02:00
Matthew Honnibal
24dfbb8a28 Fix model collation 2018-06-25 14:35:24 +02:00
Matthew Honnibal
62237755a4 Import shutil 2018-06-25 13:40:17 +02:00
Matthew Honnibal
a040fca99e Import json into cli.train 2018-06-25 11:50:37 +02:00
Matthew Honnibal
2c703d99c2 Fix collation of best models 2018-06-25 01:21:34 +02:00
Matthew Honnibal
2c80b7c013 Collate best model after training 2018-06-24 23:39:52 +02:00
ines
330c039106 Merge branch 'master' into develop 2018-05-26 18:30:52 +02:00
James Messinger
4515e96e90 Better formatting for spacy train CLI (#2357)
* Better formatting for `spacy train` CLI

Changed to use fixed-spaces rather than tabs to align table headers and data.

### Before:
```
Itn.    P.Loss  N.Loss  UAS     NER P.  NER R.  NER F.  Tag %   Token %
0       4618.857        2910.004        76.172  79.645  67.987  88.732  88.261  100.000 4436.9  6376.4
1       4671.972        3764.812        74.481  78.046  62.374  82.680  88.377  100.000 4672.2  6227.1
2       4742.756        3673.473        71.994  77.380  63.966  84.494  90.620  100.000 4298.0  5983.9
```

### After:
```
Itn.  Dep Loss  NER Loss  UAS     NER P.  NER R.  NER F.  Tag %   Token %  CPU WPS  GPU WPS
0     4618.857  2910.004  76.172  79.645  67.987  88.732  88.261  100.000  4436.9   6376.4
1     4671.972  3764.812  74.481  78.046  62.374  82.680  88.377  100.000  4672.2   6227.1
2     4742.756  3673.473  71.994  77.380  63.966  84.494  90.620  100.000  4298.0   5983.9
```

* Added contributor file
2018-05-25 13:08:45 +02:00
Matthew Honnibal
2c4a6d66fa Merge master into develop. Big merge, many conflicts -- need to review 2018-04-29 14:49:26 +02:00
Ines Montani
3141e04822
💫 New system for error messages and warnings (#2163)
* Add spacy.errors module

* Update deprecation and user warnings

* Replace errors and asserts with new error message system

* Remove redundant asserts

* Fix whitespace

* Add messages for print/util.prints statements

* Fix typo

* Fix typos

* Move CLI messages to spacy.cli._messages

* Add decorator to display error code with message

An implementation like this is nice because it only modifies the string when it's retrieved from the containing class – so we don't have to worry about manipulating tracebacks etc.

* Remove unused link in spacy.about

* Update errors for invalid pipeline components

* Improve error for unknown factories

* Add displaCy warnings

* Update formatting consistency

* Move error message to spacy.errors

* Update errors and check if doc returned by component is None
2018-04-03 15:50:31 +02:00
Matthew Honnibal
17c3e7efa2 Add message noting vectors 2018-03-28 16:33:43 +02:00
Matthew Honnibal
1f7229f40f Revert "Merge branch 'develop' of https://github.com/explosion/spaCy into develop"
This reverts commit c9ba3d3c2d, reversing
changes made to 92c26a35d4.
2018-03-27 19:23:02 +02:00
Matthew Honnibal
86405e4ad1 Fix CLI for multitask objectives 2018-02-18 10:59:11 +01:00
Matthew Honnibal
a34749b2bf Add multitask objectives options to train CLI 2018-02-17 22:03:54 +01:00
Matthew Honnibal
262d0a3148 Fix overwriting of lexical attributes when loading vectors during training 2018-02-17 18:11:11 +01:00
Johannes Dollinger
bf94c13382 Don't fix random seeds on import 2018-02-13 12:42:23 +01:00
Søren Lind Kristiansen
7f0ab145e9 Don't pass CLI command name as dummy argument 2018-01-04 21:33:47 +01:00
Søren Lind Kristiansen
a9ff6eadc9 Prefix dummy argument names with underscore 2018-01-03 20:48:12 +01:00
Isaac Sijaranamual
20ae0c459a Fixes "Error saving model" #1622 2017-12-10 23:07:13 +01:00
Isaac Sijaranamual
e188b61960 Make cli/train.py not eat exception 2017-12-10 22:53:08 +01:00
Matthew Honnibal
c2bbf076a4 Add document length cap for training 2017-11-03 01:54:54 +01:00
ines
37e62ab0e2 Update vector meta in meta.json 2017-11-01 01:25:09 +01:00
Matthew Honnibal
3659a807b0 Remove vector pruning arg from train CLI 2017-10-31 19:21:05 +01:00
Matthew Honnibal
e98451b5f7 Add -prune-vectors argument to spacy.cly.train 2017-10-30 18:00:10 +01:00
ines
d941fc3667 Tidy up CLI 2017-10-27 14:38:39 +02:00
ines
11e3f19764 Fix vectors data added after training (see #1457) 2017-10-25 16:08:26 +02:00
ines
273e638183 Add vector data to model meta after training (see #1457) 2017-10-25 16:03:05 +02:00
Matthew Honnibal
a955843684 Increase default number of epochs 2017-10-12 13:13:01 +02:00
Matthew Honnibal
acba2e1051 Fix metadata in training 2017-10-11 08:55:52 +02:00
Matthew Honnibal
74c2c6a58c Add default name and lang to meta 2017-10-11 08:49:12 +02:00
Matthew Honnibal
5156074df1 Make loading code more consistent in train command 2017-10-10 12:51:20 -05:00
Matthew Honnibal
97c9b5db8b Patch spacy.train for new pipeline management 2017-10-09 23:41:16 -05:00
Matthew Honnibal
808d8740d6 Remove print statement 2017-10-09 08:45:20 -05:00
Matthew Honnibal
0f41b25f60 Add speed benchmarks to metadata 2017-10-09 08:05:37 -05:00
Matthew Honnibal
be4f0b6460 Update defaults 2017-10-08 02:08:12 -05:00
Matthew Honnibal
9d66a915da Update training defaults 2017-10-07 21:02:38 -05:00
Matthew Honnibal
c6cd81f192 Wrap try/except around model saving 2017-10-05 08:14:24 -05:00
Matthew Honnibal
5743b06e36 Wrap model saving in try/except 2017-10-05 08:12:50 -05:00
Matthew Honnibal
8902df44de Fix component disabling during training 2017-10-02 21:07:23 +02:00
Matthew Honnibal
c617d288d8 Update pipeline component names in spaCy train 2017-10-02 17:20:19 +02:00
Matthew Honnibal
ac8481a7b0 Print NER loss 2017-09-28 08:05:31 -05:00
Matthew Honnibal
542ebfa498 Improve defaults 2017-09-27 18:54:37 -05:00
Matthew Honnibal
dcb86bdc43 Default batch size to 32 2017-09-27 11:48:19 -05:00
ines
1ff62eaee7 Fix option shortcut to avoid conflict 2017-09-26 17:59:34 +02:00
ines
7fdfb78141 Add version option to cli.train 2017-09-26 17:34:52 +02:00
Matthew Honnibal
698fc0d016 Remove merge artefact 2017-09-26 08:31:37 -05:00
Matthew Honnibal
defb68e94f Update feature/noshare with recent develop changes 2017-09-26 08:15:14 -05:00
ines
edf7e4881d Add meta.json option to cli.train and add relevant properties
Add accuracy scores to meta.json instead of accuracy.json and replace
all relevant properties like lang, pipeline, spacy_version in existing
meta.json. If not present, also add name and version placeholders to
make it packagable.
2017-09-25 19:00:47 +02:00
Matthew Honnibal
204b58c864 Fix evaluation during training 2017-09-24 05:01:03 -05:00
Matthew Honnibal
dc3a623d00 Remove unused update_shared argument 2017-09-24 05:00:37 -05:00
Matthew Honnibal
4348c479fc Merge pre-trained vectors and noshare patches 2017-09-22 20:07:28 -05:00
Matthew Honnibal
e93d43a43a Fix training with preset vectors 2017-09-22 20:00:40 -05:00
Matthew Honnibal
a2357cce3f Set random seed in train script 2017-09-23 02:57:31 +02:00
Matthew Honnibal
0a9016cade Fix serialization during training 2017-09-21 13:06:45 -05:00
Matthew Honnibal
20193371f5 Don't share CNN, to reduce complexities 2017-09-21 14:59:48 +02:00
Matthew Honnibal
1d73dec8b1 Refactor train script 2017-09-20 19:17:10 -05:00
Matthew Honnibal
a0c4b33d03 Support resuming a model during spacy train 2017-09-18 18:04:47 -05:00
Matthew Honnibal
8496d76224 Merge branch 'develop' of https://github.com/explosion/spaCy into develop 2017-09-14 09:21:20 -05:00
Matthew Honnibal
24ff6b0ad9 Fix parsing and tok2vec models 2017-09-06 05:50:58 -05:00
Matthew Honnibal
e920885676 Fix pickle during train 2017-09-02 12:46:01 -05:00
Matthew Honnibal
7a6edeea68 Merge branch 'develop' of https://github.com/explosion/spaCy into develop 2017-08-20 12:55:39 -05:00
Matthew Honnibal
f2f9229964 Fix name of update_shared flag 2017-08-20 18:19:06 +02:00
Matthew Honnibal
84bb543e4d Add gold_preproc flag to cli/train 2017-08-20 11:07:00 -05:00
Matthew Honnibal
11c31d285c Restore changes from nn-beam-parser 2017-08-18 22:26:12 +02:00
Matthew Honnibal
52c180ecf5 Revert "Merge branch 'develop' of https://github.com/explosion/spaCy into develop"
This reverts commit ea8de11ad5, reversing
changes made to 08e443e083.
2017-08-14 13:00:23 +02:00
Matthew Honnibal
8870d491f1 Remove redundant pickling during training 2017-08-12 08:55:53 -05:00
Matthew Honnibal
0a566dc320 Add update_tensors flag to Language.update. Experimental, re #1182 2017-08-06 02:18:12 +02:00
Matthew Honnibal
c52fde40f4 Improve train CLI 2017-06-04 20:18:37 -05:00
Matthew Honnibal
21eef90dbc Support specifying which GPU 2017-06-03 16:10:23 -05:00
Matthew Honnibal
43353b5413 Improve train CLI script 2017-06-03 13:28:20 -05:00
Matthew Honnibal
8a693c2605 Write binary file during training 2017-05-31 02:59:18 +02:00
Matthew Honnibal
49235017bf Merge branch 'develop' of https://github.com/explosion/spaCy into develop 2017-05-27 16:34:28 -05:00
Matthew Honnibal
5e4312feed Evaluate loaded class, to ensure save/load works 2017-05-27 15:47:02 -05:00
ines
086a06e7d7 Fix CLI docstrings and add command as first argument
Workaround for Plac
2017-05-27 20:01:46 +02:00
Matthew Honnibal
de13fe0305 Remove length cap on sentences 2017-05-27 08:20:32 -05:00
Matthew Honnibal
d65f99a720 Improve model saving in train script 2017-05-26 05:52:09 -05:00
Matthew Honnibal
df8015f05d Tweaks to train script 2017-05-25 17:15:24 -05:00
Matthew Honnibal
702fe74a4d Clean up spacy.cli.train 2017-05-25 16:16:30 -05:00
Matthew Honnibal
135a13790c Disable gold preprocessing 2017-05-24 20:10:20 -05:00
Matthew Honnibal
3959d778ac Revert "Revert "WIP on improving parser efficiency""
This reverts commit 532afef4a8.
2017-05-23 03:06:53 -05:00
Matthew Honnibal
532afef4a8 Revert "WIP on improving parser efficiency"
This reverts commit bdaac7ab44.
2017-05-23 03:05:25 -05:00
Matthew Honnibal
bdaac7ab44 WIP on improving parser efficiency 2017-05-23 02:59:31 -05:00
Matthew Honnibal
6e8dce2c05 Fix train command line args 2017-05-22 10:41:39 -05:00
Matthew Honnibal
ae8cf70dc1 Fix CLI train signature 2017-05-22 06:13:39 -05:00
ines
fc3ec733ea Reduce complexity in CLI
Remove now redundant model command and move plac annotations to cli
files
2017-05-22 12:28:58 +02:00
Matthew Honnibal
bc2294d7f1 Add support for fiddly hyper-parameters to train func 2017-05-22 04:51:08 -05:00
Matthew Honnibal
4e0988605a Pass through non-projective=True 2017-05-22 04:51:08 -05:00
Matthew Honnibal
e14533757b Use averaged params for evaluation 2017-05-22 04:51:08 -05:00
Matthew Honnibal
4c9202249d Refactor training, to fix memory leak 2017-05-21 09:07:06 -05:00