spaCy/website/docs/api/morphologizer.md
Daniël de Kok efdbb722c5
Store activations in Docs when save_activations is enabled (#11002)
* Store activations in Doc when `store_activations` is enabled

This change adds the new `activations` attribute to `Doc`. This
attribute can be used by trainable pipes to store their activations,
probabilities, and guesses for downstream users.

As an example, this change modifies the `tagger` and `senter` pipes to
add an `store_activations` option. When this option is enabled, the
probabilities and guesses are stored in `set_annotations`.

* Change type of `store_activations` to `Union[bool, List[str]]`

When the value is:

- A bool: all activations are stored when set to `True`.
- A List[str]: the activations named in the list are stored

* Formatting fixes in Tagger

* Support store_activations in spancat and morphologizer

* Make Doc.activations type visible to MyPy

* textcat/textcat_multilabel: add store_activations option

* trainable_lemmatizer/entity_linker: add store_activations option

* parser/ner: do not currently support returning activations

* Extend tagger and senter tests

So that they, like the other tests, also check that we get no
activations if no activations were requested.

* Document `Doc.activations` and `store_activations` in the relevant pipes

* Start errors/warnings at higher numbers to avoid merge conflicts

Between the master and v4 branches.

* Add `store_activations` to docstrings.

* Replace store_activations setter by set_store_activations method

Setters that take a different type than what the getter returns are still
problematic for MyPy. Replace the setter by a method, so that type inference
works everywhere.

* Use dict comprehension suggested by @svlandeg

* Revert "Use dict comprehension suggested by @svlandeg"

This reverts commit 6e7b958f70.

* EntityLinker: add type annotations to _add_activations

* _store_activations: make kwarg-only, remove doc_scores_lens arg

* set_annotations: add type annotations

* Apply suggestions from code review

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* TextCat.predict: return dict

* Make the `TrainablePipe.store_activations` property a bool

This means that we can also bring back `store_activations` setter.

* Remove `TrainablePipe.activations`

We do not need to enumerate the activations anymore since `store_activations` is
`bool`.

* Add type annotations for activations in predict/set_annotations

* Rename `TrainablePipe.store_activations` to `save_activations`

* Error E1400 is not used anymore

This error was used when activations were still `Union[bool, List[str]]`.

* Change wording in API docs after store -> save change

* docs: tag (save_)activations as new in spaCy 4.0

* Fix copied line in morphologizer activations test

* Don't train in any test_save_activations test

* Rename activations

- "probs" -> "probabilities"
- "guesses" -> "label_ids", except in the edit tree lemmatizer, where
  "guesses" -> "tree_ids".

* Remove unused W400 warning.

This warning was used when we still allowed the user to specify
which activations to save.

* Formatting fixes

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>

* Replace "kb_ids" by a constant

* spancat: replace a cast by an assertion

* Fix EOF spacing

* Fix comments in test_save_activations tests

* Do not set RNG seed in activation saving tests

* Revert "spancat: replace a cast by an assertion"

This reverts commit 0bd5730d16.

Co-authored-by: Sofie Van Landeghem <svlandeg@users.noreply.github.com>
2022-09-13 09:51:12 +02:00

25 KiB

title tag source new teaser api_base_class api_string_name api_trainable
Morphologizer class spacy/pipeline/morphologizer.pyx 3 Pipeline component for predicting morphological features /api/tagger morphologizer true

A trainable pipeline component to predict morphological features and coarse-grained POS tags following the Universal Dependencies UPOS and FEATS annotation guidelines.

Assigned Attributes

Predictions are saved to Token.morph and Token.pos.

Location Value
Token.pos The UPOS part of speech (hash). int
Token.pos_ The UPOS part of speech. str
Token.morph Morphological features. MorphAnalysis

Config and implementation

The default config is defined by the pipeline component factory and describes how the component should be configured. You can override its settings via the config argument on nlp.add_pipe or in your config.cfg for training. See the model architectures documentation for details on the architectures and their arguments and hyperparameters.

Example

from spacy.pipeline.morphologizer import DEFAULT_MORPH_MODEL
config = {"model": DEFAULT_MORPH_MODEL}
nlp.add_pipe("morphologizer", config=config)
Setting Description
model The model to use. Defaults to Tagger. Model[List[Doc], List[Floats2d]]
overwrite 3.2 Whether the values of existing features are overwritten. Defaults to True. bool
extend 3.2 Whether existing feature types (whose values may or may not be overwritten depending on overwrite) are preserved. Defaults to False. bool
scorer 3.2 The scoring method. Defaults to Scorer.score_token_attr for the attributes "pos" and "morph" and Scorer.score_token_attr_per_feat for the attribute "morph". Optional[Callable]
save_activations 4.0 Save activations in Doc when annotating. Saved activations are "probabilities" and "label_ids". Union[bool, list[str]]
%%GITHUB_SPACY/spacy/pipeline/morphologizer.pyx

Morphologizer.__init__

Create a new pipeline instance. In your application, you would normally use a shortcut for this and instantiate the component using its string name and nlp.add_pipe.

The overwrite and extend settings determine how existing annotation is handled (with the example for existing annotation A=B|C=D + predicted annotation C=E|X=Y):

  • overwrite=True, extend=True: overwrite values of existing features, add any new features (A=B|C=D + C=E|X=YA=B|C=E|X=Y)
  • overwrite=True, extend=False: overwrite completely, removing any existing features (A=B|C=D + C=E|X=YC=E|X=Y)
  • overwrite=False, extend=True: keep values of existing features, add any new features (A=B|C=D + C=E|X=YA=B|C=D|X=Y)
  • overwrite=False, extend=False: do not modify the existing annotation if set (A=B|C=D + C=E|X=YA=B|C=D)

Example

# Construction via add_pipe with default model
morphologizer = nlp.add_pipe("morphologizer")

# Construction via create_pipe with custom model
config = {"model": {"@architectures": "my_morphologizer"}}
morphologizer = nlp.add_pipe("morphologizer", config=config)

# Construction from class
from spacy.pipeline import Morphologizer
morphologizer = Morphologizer(nlp.vocab, model)
Name Description
vocab The shared vocabulary. Vocab
model The Model powering the pipeline component. Model[List[Doc], List[Floats2d]]
name String name of the component instance. Used to add entries to the losses during training. str
keyword-only
overwrite 3.2 Whether the values of existing features are overwritten. Defaults to True. bool
extend 3.2 Whether existing feature types (whose values may or may not be overwritten depending on overwrite) are preserved. Defaults to False. bool
scorer 3.2 The scoring method. Defaults to Scorer.score_token_attr for the attributes "pos" and "morph" and Scorer.score_token_attr_per_feat for the attribute "morph". Optional[Callable]

Morphologizer.__call__

Apply the pipe to one document. The document is modified in place, and returned. This usually happens under the hood when the nlp object is called on a text and all pipeline components are applied to the Doc in order. Both __call__ and pipe delegate to the predict and set_annotations methods.

Example

doc = nlp("This is a sentence.")
morphologizer = nlp.add_pipe("morphologizer")
# This usually happens under the hood
processed = morphologizer(doc)
Name Description
doc The document to process. Doc
RETURNS The processed document. Doc

Morphologizer.pipe

Apply the pipe to a stream of documents. This usually happens under the hood when the nlp object is called on a text and all pipeline components are applied to the Doc in order. Both __call__ and pipe delegate to the predict and set_annotations methods.

Example

morphologizer = nlp.add_pipe("morphologizer")
for doc in morphologizer.pipe(docs, batch_size=50):
    pass
Name Description
stream A stream of documents. Iterable[Doc]
keyword-only
batch_size The number of documents to buffer. Defaults to 128. int
YIELDS The processed documents in order. Doc

Morphologizer.initialize

Initialize the component for training. get_examples should be a function that returns an iterable of Example objects. At least one example should be supplied. The data examples are used to initialize the model of the component and can either be the full training data or a representative sample. Initialization includes validating the network, inferring missing shapes and setting up the label scheme based on the data. This method is typically called by Language.initialize and lets you customize arguments it receives via the [initialize.components] block in the config.

Example

morphologizer = nlp.add_pipe("morphologizer")
morphologizer.initialize(lambda: examples, nlp=nlp)
### config.cfg
[initialize.components.morphologizer]

[initialize.components.morphologizer.labels]
@readers = "spacy.read_labels.v1"
path = "corpus/labels/morphologizer.json
Name Description
get_examples Function that returns gold-standard annotations in the form of Example objects. Must contain at least one Example. Callable], Iterable[Example
keyword-only
nlp The current nlp object. Defaults to None. Optional[Language]
labels The label information to add to the component, as provided by the label_data property after initialization. To generate a reusable JSON file from your data, you should run the init labels command. If no labels are provided, the get_examples callback is used to extract the labels from the data, which may be a lot slower. Optional[dict]

Morphologizer.predict

Apply the component's model to a batch of Doc objects, without modifying them.

Example

morphologizer = nlp.add_pipe("morphologizer")
scores = morphologizer.predict([doc1, doc2])
Name Description
docs The documents to predict. Iterable[Doc]
RETURNS The model's prediction for each document.

Morphologizer.set_annotations

Modify a batch of Doc objects, using pre-computed scores.

Example

morphologizer = nlp.add_pipe("morphologizer")
scores = morphologizer.predict([doc1, doc2])
morphologizer.set_annotations([doc1, doc2], scores)
Name Description
docs The documents to modify. Iterable[Doc]
scores The scores to set, produced by Morphologizer.predict.

Morphologizer.update

Learn from a batch of Example objects containing the predictions and gold-standard annotations, and update the component's model. Delegates to predict and get_loss.

Example

morphologizer = nlp.add_pipe("morphologizer")
optimizer = nlp.initialize()
losses = morphologizer.update(examples, sgd=optimizer)
Name Description
examples A batch of Example objects to learn from. Iterable[Example]
keyword-only
drop The dropout rate. float
sgd An optimizer. Will be created via create_optimizer if not set. Optional[Optimizer]
losses Optional record of the loss during training. Updated using the component name as the key. Optional[Dict[str, float]]
RETURNS The updated losses dictionary. Dict[str, float]

Morphologizer.get_loss

Find the loss and gradient of loss for the batch of documents and their predicted scores.

Example

morphologizer = nlp.add_pipe("morphologizer")
scores = morphologizer.predict([eg.predicted for eg in examples])
loss, d_loss = morphologizer.get_loss(examples, scores)
Name Description
examples The batch of examples. Iterable[Example]
scores Scores representing the model's predictions.
RETURNS The loss and the gradient, i.e. (loss, gradient). Tuple[float, float]

Morphologizer.create_optimizer

Create an optimizer for the pipeline component.

Example

morphologizer = nlp.add_pipe("morphologizer")
optimizer = morphologizer.create_optimizer()
Name Description
RETURNS The optimizer. Optimizer

Morphologizer.use_params

Modify the pipe's model, to use the given parameter values. At the end of the context, the original parameters are restored.

Example

morphologizer = nlp.add_pipe("morphologizer")
with morphologizer.use_params(optimizer.averages):
    morphologizer.to_disk("/best_model")
Name Description
params The parameter values to use in the model. dict

Morphologizer.add_label

Add a new label to the pipe. If the Morphologizer should set annotations for both pos and morph, the label should include the UPOS as the feature POS. Raises an error if the output dimension is already set, or if the model has already been fully initialized. Note that you don't have to call this method if you provide a representative data sample to the initialize method. In this case, all labels found in the sample will be automatically added to the model, and the output dimension will be inferred automatically.

Example

morphologizer = nlp.add_pipe("morphologizer")
morphologizer.add_label("Mood=Ind|POS=VERB|Tense=Past|VerbForm=Fin")
Name Description
label The label to add. str
RETURNS 0 if the label is already present, otherwise 1. int

Morphologizer.to_disk

Serialize the pipe to disk.

Example

morphologizer = nlp.add_pipe("morphologizer")
morphologizer.to_disk("/path/to/morphologizer")
Name Description
path A path to a directory, which will be created if it doesn't exist. Paths may be either strings or Path-like objects. Union[str, Path]
keyword-only
exclude String names of serialization fields to exclude. Iterable[str]

Morphologizer.from_disk

Load the pipe from disk. Modifies the object in place and returns it.

Example

morphologizer = nlp.add_pipe("morphologizer")
morphologizer.from_disk("/path/to/morphologizer")
Name Description
path A path to a directory. Paths may be either strings or Path-like objects. Union[str, Path]
keyword-only
exclude String names of serialization fields to exclude. Iterable[str]
RETURNS The modified Morphologizer object. Morphologizer

Morphologizer.to_bytes

Example

morphologizer = nlp.add_pipe("morphologizer")
morphologizer_bytes = morphologizer.to_bytes()

Serialize the pipe to a bytestring.

Name Description
keyword-only
exclude String names of serialization fields to exclude. Iterable[str]
RETURNS The serialized form of the Morphologizer object. bytes

Morphologizer.from_bytes

Load the pipe from a bytestring. Modifies the object in place and returns it.

Example

morphologizer_bytes = morphologizer.to_bytes()
morphologizer = nlp.add_pipe("morphologizer")
morphologizer.from_bytes(morphologizer_bytes)
Name Description
bytes_data The data to load from. bytes
keyword-only
exclude String names of serialization fields to exclude. Iterable[str]
RETURNS The Morphologizer object. Morphologizer

Morphologizer.labels

The labels currently added to the component in the Universal Dependencies FEATS format. Note that even for a blank component, this will always include the internal empty label _. If POS features are used, the labels will include the coarse-grained POS as the feature POS.

Example

morphologizer.add_label("Mood=Ind|POS=VERB|Tense=Past|VerbForm=Fin")
assert "Mood=Ind|POS=VERB|Tense=Past|VerbForm=Fin" in morphologizer.labels
Name Description
RETURNS The labels added to the component. Iterable[str, ...]

Morphologizer.label_data

The labels currently added to the component and their internal meta information. This is the data generated by init labels and used by Morphologizer.initialize to initialize the model with a pre-defined label set.

Example

labels = morphologizer.label_data
morphologizer.initialize(lambda: [], nlp=nlp, labels=labels)
Name Description
RETURNS The label data added to the component. dict

Serialization fields

During serialization, spaCy will export several data fields used to restore different aspects of the object. If needed, you can exclude them from serialization by passing in the string names via the exclude argument.

Example

data = morphologizer.to_disk("/path", exclude=["vocab"])
Name Description
vocab The shared Vocab.
cfg The config file. You usually don't want to exclude this.
model The binary model data. You usually don't want to exclude this.