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1136 Commits

Author SHA1 Message Date
Ines Montani
513c4e332a
Include custom code via spacy package command (#6531) 2020-12-10 20:36:46 +08:00
Ines Montani
2a6043fabb
Merge pull request #6530 from explosion/feature/init-config-cpu-gpu 2020-12-10 09:38:46 +11:00
Ines Montani
9d32e839d3 Merge branch 'develop' into feature/init-config-cpu-gpu 2020-12-10 08:50:53 +11:00
Adriane Boyd
fa8fa474a3 Add nlp.batch_size setting 
Add a default `batch_size` setting for `Language.pipe` and
`Language.evaluate` as `nlp.batch_size`.
 2020-12-09 09:13:26 +01:00
Ines Montani
758ad6c3cd Make CPU the default for init config 2020-12-09 11:00:51 +11:00
Ines Montani
5d605d539d Remove output_file from init_config helper 2020-12-09 10:57:55 +11:00
svlandeg
8f8a7f1733 returning config in init_config 2020-12-08 17:37:20 +01:00
Ines Montani
6c7a930ee8 Fix variable 2020-12-08 20:44:59 +11:00
Ines Montani
94a5a9814f Update argument handling and documentation 2020-12-08 20:41:18 +11:00
Adriane Boyd
5ceac425ee Remove non-working --use-chars from train CLI 
Remove the non-working `--use-chars` option from the train CLI. The
implementation of the option across component types and the CLI settings
could be fixed, but the `CharacterEmbed` model does not work on GPU in
v2 so it's better to remove it.
 2020-12-08 08:30:00 +01:00
Ines Montani
d25b1606d6 Allow reading config from sdtin in spacy train 2020-12-08 18:01:40 +11:00
Adriane Boyd
78085fab1f
Check for spacy-nightly package in download (#6502) 
Also check for spacy-nightly in download so that `--no-deps` isn't set
for normal nightly installs.
 2020-12-04 09:40:03 +01:00
Adriane Boyd
591cd48aa8 Remove config.cfg from MANIFEST 2020-12-01 12:58:02 +01:00
Adriane Boyd
b0dd13e0ba Support LICENSE in spacy package 
If present, include the file `input_dir/LICENSE` at the top level of the
packaged model.
 2020-11-30 13:43:58 +01:00
Ines Montani
9beba7164f Make jinja2 top-level import 
No problem anymore since it's now an official dependency
 2020-11-27 15:17:14 +08:00
Adriane Boyd
573f5c863f
Fix tag map clobbering in spacy train (#6437) 
Fix bug from #5768 where the tag map is clobbered if a custom tag map
isn't provided.
 2020-11-24 13:13:16 +01:00
Sofie Van Landeghem
a0c899a0ff
Fix textcat + transformer architecture (#6371) 
* add pooling to textcat TransformerListener

* maybe_get_dim in case it's null
 2020-11-10 20:14:47 +08:00
Adriane Boyd
a4b32b9552
Handle missing reference values in scorer (#6286) 
* Handle missing reference values in scorer

Handle missing values in reference doc during scoring where it is
possible to detect an unset state for the attribute. If no reference
docs contain annotation, `None` is returned instead of a score. `spacy
evaluate` displays `-` for missing scores and the missing scores are
saved as `None`/`null` in the metrics.

Attributes without unset states:

* `token.head`: relies on `token.dep` to recognize unset values
* `doc.cats`: unable to handle missing annotation

Additional changes:

* add optional `has_annotation` check to `score_scans` to replace
`doc.sents` hack
* update `score_token_attr_per_feat` to handle missing and empty morph
representations
* fix bug in `Doc.has_annotation` for normalization of `IS_SENT_START`
vs. `SENT_START`

* Fix import

* Update return types
 2020-11-03 15:47:18 +01:00
Ines Montani
2c9804038d Fix success message [ci skip] 2020-10-23 16:11:54 +02:00
Adriane Boyd
563a21834e Save raw scores in evaluate output 2020-10-19 15:49:09 +02:00
Adriane Boyd
dd207ca6d0 Add dep_las_per_type and more generic PRF printer 2020-10-19 15:49:02 +02:00
Adriane Boyd
4300858ecb Include per-type/feat scores in evaluate output 2020-10-19 15:48:55 +02:00
Sofie Van Landeghem
75a202ce65
TextCat updates and fixes (#6263) 
* small fix in example imports

* throw error when train_corpus or dev_corpus is not a string

* small fix in custom logger example

* limit macro_auc to labels with 2 annotations

* fix typo

* also create parents of output_dir if need be

* update documentation of textcat scores

* refactor TextCatEnsemble

* fix tests for new AUC definition

* bump to 3.0.0a42

* update docs

* rename to spacy.TextCatEnsemble.v2

* spacy.TextCatEnsemble.v1 in legacy

* cleanup

* small fix

* update to 3.0.0rc2

* fix import that got lost in merge

* cursed IDE

* fix two typos
 2020-10-18 14:50:41 +02:00
Adriane Boyd
c8d04b79e2 Sort and add vectors for langs without transformers 2020-10-16 08:25:16 +02:00
Adriane Boyd
2fbd43c603 Use core lg models as vectors models in quickstart 2020-10-16 08:17:53 +02:00
Ines Montani
1f49300862 Update transformer recommendations [ci skip] 2020-10-13 15:41:17 +02:00
svlandeg
e972ecba72 add utf8 encoding for opening file 2020-10-09 16:03:14 +02:00
Sofie Van Landeghem
241cd112f5
add reenabled pipe names back to the meta before serializing (#6219) 2020-10-08 00:44:16 +02:00
svlandeg
9b4cf7b0b6 update output of debug config command 2020-10-06 09:47:23 +02:00
Ines Montani
181039bd17
Merge pull request #6205 from explosion/feature/embed-features 2020-10-05 21:49:10 +02:00
Matthew Honnibal
b7e01d2024 Fix quickstart 2020-10-05 21:21:30 +02:00
Matthew Honnibal
ff8b980775 Upd quickstart template 2020-10-05 21:19:41 +02:00
Ines Montani
0135f6ed95 Enable commit check via env var 2020-10-05 20:51:15 +02:00
Ines Montani
d58fb42707 Add spacy_version option and validation for project.yml 2020-10-05 20:00:42 +02:00
Ines Montani
84fedcebab
Make args keyword-only [ci skip] 
Co-authored-by: Matthew Honnibal <honnibal+gh@gmail.com>
 2020-10-05 17:07:35 +02:00
Ines Montani
6958510bda Include spaCy version check in project CLI 2020-10-05 13:53:07 +02:00
Ines Montani
bcd52e5486 Tidy up errors and warnings 2020-10-04 11:16:31 +02:00
Ines Montani
3bc3c05fcc Tidy up and auto-format 2020-10-03 17:20:18 +02:00
Matthew Honnibal
db419f6b2f
Improve control of training progress and logging (#6184) 
* Make logging and progress easier to control

* Update docs

* Cleanup errors

* Fix ConfigValidationError

* Pass stdout/stderr, not wasabi.Printer

* Fix type

* Upd logging example

* Fix logger example

* Fix type
 2020-10-03 14:57:46 +02:00
Adriane Boyd
22158dc24a Add morphologizer to quickstart template 2020-10-02 15:06:16 +02:00
Ines Montani
f2627157c8 Update docs [ci skip] 2020-10-01 17:38:17 +02:00
Ines Montani
7f68f4bd92 Hide jsonl_loc on init vectors and tidy up [ci skip] 2020-10-01 16:44:17 +02:00
Ines Montani
0a8a124a6e Update docs [ci skip] 2020-10-01 12:15:53 +02:00
Ines Montani
44160cd52f Tidy up [ci skip] 2020-10-01 10:41:19 +02:00
Matthew Honnibal
59294e91aa Restore the 'jsonl' arg for init vectors 
The lexemes.jsonl file is still used in our English vectors, and it may
be required by users as well. I think it's worth supporting the option.
 2020-09-30 19:06:50 +02:00
Ines Montani
23c63eefaf Tidy up env vars [ci skip] 2020-09-30 15:15:11 +02:00
Elijah Rippeth
4cbb954281
reorder so tagmap is replaced only if a custom file is provided. (#6164) 
* reorder so tagmap is replaced only if a custom file is provided.

* Remove unneeded variable initialization

Co-authored-by: Adriane Boyd <adrianeboyd@gmail.com>
 2020-09-30 13:26:06 +02:00
Ines Montani
a5debb356d Tidy up and adjust logging [ci skip] 2020-09-30 01:22:08 +02:00
Ines Montani
56a2f778c4 Add logging [ci skip] 2020-09-30 01:08:55 +02:00
Ines Montani
fe3f111c37
Merge pull request #6168 from explosion/fix/default-corpus-values 2020-09-30 00:24:02 +02:00
Ines Montani
ae51843468 Remove augmenter from jinja template [ci skip] 2020-09-29 23:08:50 +02:00
Ines Montani
9bb958fd0a Fix debug data [ci skip] 2020-09-29 23:07:11 +02:00
Ines Montani
df8dd91b6f Merge branch 'develop' into fix/default-corpus-values 2020-09-29 22:55:39 +02:00
Ines Montani
0a1ee109db Remove init form path 2020-09-29 22:53:18 +02:00
Ines Montani
c334a7d45f Remove 2020-09-29 22:38:39 +02:00
Ines Montani
1aeef3bfbb Make corpus paths default to None and improve errors 2020-09-29 22:33:46 +02:00
Ines Montani
0250bcf6a3 Show validation error during init 2020-09-29 22:29:09 +02:00
Ines Montani
43c92ec8c9 Resolve dir for better output [ci skip] 2020-09-29 22:01:04 +02:00
Ines Montani
fa47f87924 Tidy up and auto-format 2020-09-29 21:39:28 +02:00
Ines Montani
604be54a5c Support --code in evaluate CLI [ci skip] 2020-09-29 21:20:56 +02:00
Ines Montani
d3c63b7965 Merge branch 'develop' into feature/prepare 2020-09-29 20:53:05 +02:00
Ines Montani
2be80379ec Fix small issues, resolve_dot_names and debug model 2020-09-29 20:38:35 +02:00
Ines Montani
71a0ee274a Move init labels to init pipeline module 2020-09-29 18:09:33 +02:00
Ines Montani
534e1ef498 Fix template 2020-09-29 17:02:55 +02:00
Matthew Honnibal
10847c7f4e Fix arg 2020-09-29 16:48:07 +02:00
Matthew Honnibal
e70a00fa76 Remove unnecessary warning from train 2020-09-29 16:47:54 +02:00
Matthew Honnibal
3f0d61232d Remove outdated arg from train 2020-09-29 16:47:44 +02:00
Matthew Honnibal
e957d66b92 Merge branch 'feature/prepare' of https://github.com/explosion/spaCy into feature/prepare 2020-09-29 16:22:53 +02:00
Matthew Honnibal
45daf5c9fe Add init labels command 2020-09-29 16:22:37 +02:00
Ines Montani
aa2a6882d0 Fix logging 2020-09-29 16:08:39 +02:00
Sofie Van Landeghem
6a04e5adea
encoding UTF8 (#6161) 2020-09-29 14:49:55 +02:00
Ines Montani
4925ad760a Add init vectors 2020-09-29 10:58:50 +02:00
Ines Montani
ff9a63bfbd begin_training -> initialize 2020-09-28 21:35:09 +02:00
Ines Montani
a139fe672b Fix typos and refactor CLI logging 2020-09-28 21:17:10 +02:00
Ines Montani
2e9c9e74af Fix config resolution and interpolation 
TODO: auto-interpolate in Thinc if config is dict (i.e. likely subsection)
 2020-09-28 15:34:00 +02:00
Ines Montani
822ea4ef61 Refactor CLI 2020-09-28 15:09:59 +02:00
Ines Montani
a89e0ff7cb Fix typo 2020-09-28 12:55:21 +02:00
Ines Montani
a62337b3f3 Tidy up vocab init 2020-09-28 12:53:06 +02:00
Ines Montani
c22ecc66bb Don't support init path for now 2020-09-28 12:46:28 +02:00
Ines Montani
a5f2cc0509 Tidy up and remove raw text (rehearsal) for now 2020-09-28 12:30:13 +02:00
Ines Montani
1590de11b1 Update config 2020-09-28 12:05:23 +02:00
Ines Montani
e44a7519cd Update CLI and add [initialize] block 2020-09-28 11:56:14 +02:00
Ines Montani
d5155376fd Update vocab init 2020-09-28 11:30:18 +02:00
Ines Montani
8b74fd19df init pipeline -> init nlp 2020-09-28 11:13:38 +02:00
Ines Montani
2fdb7285a0 Update CLI 2020-09-28 11:06:07 +02:00
Ines Montani
553bfea641 Fix commands 2020-09-28 10:53:17 +02:00
Matthew Honnibal
44bad1474c Add init_pipeline file 2020-09-28 09:47:34 +02:00
Matthew Honnibal
b886f53c31 init-pipeline runs (maybe doesnt work) 2020-09-28 03:42:47 +02:00
Matthew Honnibal
ed2aff2db3 Remove unused train code 2020-09-28 03:12:31 +02:00
Matthew Honnibal
3a0a3b8db6 Dont hard-code for 'corpora' name 2020-09-28 03:06:33 +02:00
Matthew Honnibal
a976da168c
Support data augmentation in Corpus (#6155) 
* Support data augmentation in Corpus

* Note initial docs for data augmentation

* Add augmenter to quickstart

* Fix flake8

* Format

* Fix test

* Update spacy/tests/training/test_training.py

* Improve data augmentation arguments

* Update templates

* Move randomization out into caller

* Refactor

* Update spacy/training/augment.py

* Update spacy/tests/training/test_training.py

* Fix augment

* Fix test
 2020-09-28 03:03:27 +02:00
Matthew Honnibal
a3e1791c9c Upd train 2020-09-28 01:08:30 +02:00
Matthew Honnibal
b5556093e2 Start updating train script 2020-09-27 23:59:44 +02:00
Ines Montani
e04bd16f7f Merge branch 'develop' into feature/new-thinc-config-resolution 2020-09-27 22:34:46 +02:00
Ines Montani
d7ad65a9bb Fix handling of error description [ci skip] 2020-09-27 22:31:57 +02:00
Ines Montani
7e938ed63e Update config resolution to use new Thinc 2020-09-27 22:21:31 +02:00
Matthew Honnibal
39b178999c Tmp notes 2020-09-27 20:13:38 +02:00
Ines Montani
b4486d747d Merge branch 'develop' into fix/train-config-interpolation 2020-09-26 15:32:14 +02:00
Ines Montani
b2d07de786 Construct nlp from uninterpolated config before training 2020-09-26 15:16:59 +02:00
Ines Montani
ca3c997062 Improve CLI config validation with latest Thinc 2020-09-26 13:13:57 +02:00
Matthew Honnibal
3d8388969e Sort paths for cache consistency 2020-09-25 19:07:26 +02:00
Sofie Van Landeghem
009ba14aaf
Fix pretraining in train script (#6143) 
* update pretraining API in train CLI

* bump thinc to 8.0.0a35

* bump to 3.0.0a26

* doc fixes

* small doc fix
 2020-09-25 15:47:10 +02:00
Matthew Honnibal
74ee456374 Merge branch 'develop' of https://github.com/explosion/spaCy into develop 2020-09-24 16:11:47 +02:00
Matthew Honnibal
0bc214c102 Fix pull 2020-09-24 16:11:33 +02:00
Ines Montani
74e1f192b4
Merge pull request #6134 from explosion/feature/training_before_to_disk 2020-09-24 14:44:11 +02:00
Ines Montani
24e7ac3f2b Fix download CLI [ci skip] 2020-09-24 14:43:56 +02:00
Ines Montani
88e54caa12 accuracy -> performance 2020-09-24 14:32:35 +02:00
Ines Montani
be56c0994b Add [training.before_to_disk] callback 2020-09-24 12:40:25 +02:00
Ines Montani
c6c67b606e
Merge pull request #6133 from explosion/fix/score_weights 2020-09-24 12:00:57 +02:00
Ines Montani
f69fea8b25 Improve error handling around non-number scores 2020-09-24 11:29:07 +02:00
Matthew Honnibal
17a6b0a173
Make project pull order insensitive (#6131) 2020-09-24 10:30:42 +02:00
Ines Montani
ae51f580c1 Fix handling of score_weights 2020-09-24 10:27:33 +02:00
svlandeg
35dbc63578 Merge remote-tracking branch 'upstream/develop' into fix/nr_features 
# Conflicts:
#	spacy/ml/models/parser.py
#	spacy/tests/serialize/test_serialize_config.py
#	website/docs/api/architectures.md
 2020-09-23 17:01:13 +02:00
svlandeg
dd2292793f 'parser' instead of 'deps' for state_type 2020-09-23 16:53:49 +02:00
svlandeg
6c85fab316 state_type and extra_state_tokens instead of nr_feature_tokens 2020-09-23 13:35:09 +02:00
Ines Montani
7745d77a38 Fix whitespace in template [ci skip] 2020-09-23 13:21:42 +02:00
svlandeg
6435458d51 simplify expression 2020-09-23 12:12:38 +02:00
svlandeg
20b0ec5dcf avoid logging performance of frozen components 2020-09-23 10:37:12 +02:00
Ines Montani
6ca06cb62c Update docs and formatting [ci skip] 2020-09-23 10:14:27 +02:00
Ines Montani
888f936a73
Merge pull request #6106 from svlandeg/feature/textcat-quickstart 2020-09-23 10:11:45 +02:00
Ines Montani
60a317520a
Merge pull request #6109 from svlandeg/feature/2rename 2020-09-23 09:47:12 +02:00
svlandeg
556f3e4652 add pooling to NEL's TransformerListener 2020-09-23 09:24:28 +02:00
Sofie Van Landeghem
86a08f819d
tok2vec.update instead of predict (#6113) 2020-09-22 21:54:52 +02:00
Ines Montani
5e3b796b12 Validate section refs in debug config 2020-09-22 12:24:39 +02:00
svlandeg
085a1c8e2b add no_output_layer to TextCatBOW config 2020-09-22 12:06:40 +02:00
svlandeg
b556a10808 rename converts in_to_out 2020-09-22 11:50:19 +02:00
svlandeg
e931f4d757 add textcat score 2020-09-22 10:56:43 +02:00
svlandeg
396b33257f add entity_linker to jinja template 2020-09-22 10:40:05 +02:00
svlandeg
135de82a2d add textcat to quickstart 2020-09-22 10:22:06 +02:00
Ines Montani
6316d5f398 Improve messages in project CLI [ci skip] 2020-09-22 09:45:34 +02:00
Ines Montani
81606b29bd
Merge pull request #6104 from svlandeg/fix/debug_model [ci skip] 2020-09-22 09:31:23 +02:00
svlandeg
45b29c4a5b cleanup 2020-09-21 23:17:23 +02:00
svlandeg
fa5c416db6 initialize through nlp object and with train_corpus 2020-09-21 23:09:22 +02:00
svlandeg
447b3e5787 Merge remote-tracking branch 'upstream/develop' into fix/debug_model 
# Conflicts:
#	spacy/cli/debug_model.py
 2020-09-21 16:58:40 +02:00
Ines Montani
e8bcaa44f1 Don't auto-decompress archives with smart_open [ci skip] 2020-09-21 16:01:46 +02:00
svlandeg
eb9b447960 Merge remote-tracking branch 'upstream/develop' into fix/debug_model 
# Conflicts:
#	spacy/cli/debug_model.py
 2020-09-21 14:05:16 +02:00
Ines Montani
758ead8a47 Sync overrides with CLI overrides 2020-09-21 12:50:13 +02:00
Ines Montani
5497acf49a Support config overrides via environment variables 2020-09-21 11:25:10 +02:00
Ines Montani
1114219ae3 Tidy up and auto-format 2020-09-21 10:59:07 +02:00
Ines Montani
b2302c0a1c Improve error for missing dependency 2020-09-20 17:44:51 +02:00
Matthew Honnibal
8fb59d958c Format 2020-09-20 16:31:48 +02:00
Matthew Honnibal
dc22771f87 Fix sparse checkout 2020-09-20 16:30:05 +02:00
Matthew Honnibal
a0fb5e50db Use simple git clone call if not sparse 2020-09-20 16:22:04 +02:00
Matthew Honnibal
2c24d633d0 Use updated run_command 2020-09-20 16:21:43 +02:00
Ines Montani
554c9a2497 Update docs [ci skip] 2020-09-20 12:30:53 +02:00
svlandeg
6db1d5dc0d trying some stuff 2020-09-19 19:11:30 +02:00
Ines Montani
e863b3dc14
Merge pull request #6092 from adrianeboyd/bugfix/load-vocab-lookups-2 2020-09-19 12:33:38 +02:00
Sofie Van Landeghem
39872de1f6
Introducing the gpu_allocator (#6091) 
* rename 'use_pytorch_for_gpu_memory' to 'gpu_allocator'

* --code instead of --code-path

* update documentation

* avoid querying the "system" section directly

* add explanation of gpu_allocator to TF/PyTorch section in docs

* fix typo

* fix typo 2

* use set_gpu_allocator from thinc 8.0.0a34

* default null instead of empty string
 2020-09-19 01:17:02 +02:00
svlandeg
73ff52b9ec hack for tok2vec listener 2020-09-18 16:43:15 +02:00
Adriane Boyd
eed4b785f5 Load vocab lookups tables at beginning of training 
Similar to how vectors are handled, move the vocab lookups to be loaded
at the start of training rather than when the vocab is initialized,
since the vocab doesn't have access to the full config when it's
created.

The option moves from `nlp.load_vocab_data` to `training.lookups`.

Typically these tables will come from `spacy-lookups-data`, but any
`Lookups` object can be provided.

The loading from `spacy-lookups-data` is now strict, so configs for each
language should specify the exact tables required. This also makes it
easier to control whether the larger clusters and probs tables are
included.

To load `lexeme_norm` from `spacy-lookups-data`:

```
[training.lookups]
@misc = "spacy.LoadLookupsData.v1"
lang = ${nlp.lang}
tables = ["lexeme_norm"]
```
 2020-09-18 15:59:16 +02:00