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868 Commits

Author SHA1 Message Date
Matthew Honnibal
8665a77f48 Fix feature error in NER 2017-09-16 12:46:57 -05:00
Matthew Honnibal
f730d07e4e Fix prange error for Windows 2017-09-16 00:25:33 +02:00
Matthew Honnibal
8b481e0465 Remove redundant brackets 2017-09-15 10:38:08 +02:00
Matthew Honnibal
8c503487af Fix lookup of missing NER actions 2017-09-14 16:59:45 +02:00
Matthew Honnibal
664c5af745 Revert padding in parser 2017-09-14 16:59:25 +02:00
Matthew Honnibal
c6395b057a Improve parser feature extraction, for missing values 2017-09-14 16:18:02 +02:00
Matthew Honnibal
daf869ab3b Fix add_action for NER, so labelled 'O' actions aren't added 2017-09-14 16:16:41 +02:00
Matthew Honnibal
dd9cab0faf Fix type-check for int/long 2017-09-06 19:03:05 +02:00
Matthew Honnibal
dcbf866970 Merge parser changes 2017-09-06 18:41:05 +02:00
Matthew Honnibal
24ff6b0ad9 Fix parsing and tok2vec models 2017-09-06 05:50:58 -05:00
Matthew Honnibal
33fa91feb7 Restore correctness of parser model 2017-09-04 21:19:30 +02:00
Matthew Honnibal
9d65d67985 Preserve model compatibility in parser, for now 2017-09-04 16:46:22 +02:00
Matthew Honnibal
789e1a3980 Use 13 parser features, not 8 2017-08-31 14:13:00 -05:00
Matthew Honnibal
4ceebde523 Fix gradient bug in parser 2017-08-30 17:32:56 -05:00
Matthew Honnibal
44589fb38c Fix Break oracle 2017-08-25 19:50:55 -05:00
Matthew Honnibal
20dd66ddc2 Constrain sentence boundaries to IS_PUNCT and IS_SPACE tokens 2017-08-25 19:35:47 +02:00
Matthew Honnibal
682346dd66 Restore optimized hidden_depth=0 for parser 2017-08-21 19:18:04 -05:00
Matthew Honnibal
62878e50db Fix misalignment caued by filtering inputs at wrong point in parser 2017-08-20 15:59:28 -05:00
Matthew Honnibal
84b7ed49e4 Ensure updates aren't made if no gold available 2017-08-20 14:41:38 +02:00
Matthew Honnibal
ab28f911b4 Fix parser learning rates 2017-08-19 09:02:57 -05:00
Matthew Honnibal
c307a0ffb8 Restore patches from nn-beam-parser to spacy/syntax 2017-08-18 22:38:59 +02:00
Matthew Honnibal
5f81d700ff Restore patches from nn-beam-parser to spacy/syntax 2017-08-18 22:23:03 +02:00
Matthew Honnibal
d456d2efe1 Fix conflicts in nn_parser 2017-08-18 20:55:58 +02:00
Matthew Honnibal
1cec1efca7 Fix merge conflicts in nn_parser from beam stuff 2017-08-18 20:50:49 +02:00
Matthew Honnibal
426f84937f Resolve conflicts when merging new beam parsing stuff 2017-08-18 13:38:32 -05:00
Matthew Honnibal
f75420ae79 Unhack beam parsing, moving it under options instead of global flags 2017-08-18 13:31:15 -05:00
Matthew Honnibal
0209a06b4e Update beam parser 2017-08-16 18:25:49 -05:00
Matthew Honnibal
a6d8d7c82e Add is_gold_parse method to transition system 2017-08-16 18:24:09 -05:00
Matthew Honnibal
3533bb61cb Add option of 8 feature parse state 2017-08-16 18:23:27 -05:00
Matthew Honnibal
210f6d5175 Fix efficiency error in batch parse 2017-08-15 03:19:03 -05:00
Matthew Honnibal
23537a011d Tweaks to beam parser 2017-08-15 03:15:28 -05:00
Matthew Honnibal
500e92553d Fix memory error when copying scores in beam 2017-08-15 03:15:04 -05:00
Matthew Honnibal
a8e4064dd8 Fix tensor gradient in parser 2017-08-15 03:14:36 -05:00
Matthew Honnibal
e420e0366c Remove use of hash function in beam parser 2017-08-15 03:13:57 -05:00
Matthew Honnibal
52c180ecf5 Revert "Merge branch 'develop' of https://github.com/explosion/spaCy into develop" 
This reverts commit ea8de11ad5, reversing
changes made to 08e443e083.
 2017-08-14 13:00:23 +02:00
Matthew Honnibal
0ae045256d Fix beam training 2017-08-13 18:02:05 -05:00
Matthew Honnibal
6a42cc16ff Fix beam parser, improve efficiency of non-beam 2017-08-13 12:37:26 +02:00
Matthew Honnibal
12de263813 Bug fixes to beam parsing. Learns small sample 2017-08-13 09:33:39 +02:00
Matthew Honnibal
17874fe491 Disable beam parsing 2017-08-12 19:35:40 -05:00
Matthew Honnibal
3e30712b62 Improve defaults 2017-08-12 19:24:17 -05:00
Matthew Honnibal
28e930aae0 Fixes for beam parsing. Not working 2017-08-12 19:22:52 -05:00
Matthew Honnibal
c96d769836 Fix beam parse. Not sure if working 2017-08-12 18:21:54 -05:00
Matthew Honnibal
4638f4b869 Fix beam update 2017-08-12 17:15:16 -05:00
Matthew Honnibal
d4308d2363 Initialize State offset to 0 2017-08-12 17:14:39 -05:00
Matthew Honnibal
b353e4d843 Work on parser beam training 2017-08-12 14:47:45 -05:00
Matthew Honnibal
cd5ecedf6a Try drop_layer in parser 2017-08-12 08:56:33 -05:00
Matthew Honnibal
1a59db1c86 Fix dropout and learn rate in parser 2017-08-12 05:44:39 -05:00
Matthew Honnibal
d01dc3704a Adjust parser model 2017-08-09 20:06:33 -05:00
Matthew Honnibal
f37528ef58 Pass embed size for parser fine-tune. Use SELU 2017-08-09 17:52:53 -05:00
Matthew Honnibal
bbace204be Gate parser fine-tuning behind feature flag 2017-08-09 16:40:42 -05:00
Matthew Honnibal
dbdd8afc4b Fix parser fine-tune training 2017-08-08 15:46:07 -05:00
Matthew Honnibal
88bf1cf87c Update parser for fine tuning 2017-08-08 15:34:17 -05:00
Matthew Honnibal
42bd26f6f3 Give parser its own tok2vec weights 2017-08-06 18:33:46 +02:00
Matthew Honnibal
78498a072d Return Transition for missing actions in lookup_action 2017-08-06 14:16:36 +02:00
Matthew Honnibal
bfffdeabb2 Fix parser batch-size bug introduced during cleanup 2017-08-06 14:10:48 +02:00
Matthew Honnibal
7f876a7a82 Clean up some unused code in parser 2017-08-06 00:00:21 +02:00
Matthew Honnibal
8fce187de4 Fix ArcEager for missing values 2017-08-01 22:10:05 +02:00
Matthew Honnibal
27abc56e98 Add method to get beam entities 2017-07-29 21:59:02 +02:00
Matthew Honnibal
c86445bdfd Merge branch 'develop' of https://github.com/explosion/spaCy into develop 2017-07-22 01:14:28 +02:00
Matthew Honnibal
3da1063b36 Add beam decoding to parser, to allow NER uncertainties 2017-07-20 15:02:55 +02:00
Matthew Honnibal
0ca5832427 Improve negative example handling in NER oracle 2017-07-20 00:18:49 +02:00
Tpt
57e8254f63 Adds function to extract french noun chunks 2017-06-12 15:20:49 +02:00
Matthew Honnibal
6d0356e6cc Whitespace 2017-06-04 14:55:24 -05:00
ines
6669583f4e Use OrderedDict 2017-06-02 21:07:56 +02:00
ines
2f1025a94c Port over Spanish changes from #1096 2017-06-02 19:09:58 +02:00
ines
fdd0923be4 Translate model=True in exclude to lower_model and upper_model 2017-06-02 18:37:07 +02:00
Matthew Honnibal
4c97371051 Fixes for thinc 6.7 2017-06-01 04:22:16 -05:00
Matthew Honnibal
ae8010b526 Move weight serialization to Thinc 2017-06-01 02:56:12 -05:00
Matthew Honnibal
097ab9c6e4 Fix transition system to/from disk 2017-05-31 13:44:00 +02:00
Matthew Honnibal
33e5ec737f Fix to/from disk methods 2017-05-31 13:43:10 +02:00
Matthew Honnibal
53a3824334 Fix mistake in ner feature 2017-05-31 03:01:02 +02:00
Matthew Honnibal
cc911feab2 Fix bug in NER state 2017-05-30 22:12:19 +02:00
Matthew Honnibal
be4a640f0c Fix arc eager label costs for uint64 2017-05-30 20:37:58 +02:00
Matthew Honnibal
aa4c33914b Work on serialization 2017-05-29 08:40:45 -05:00
Matthew Honnibal
59f355d525 Fixes for serialization 2017-05-29 13:38:20 +02:00
Matthew Honnibal
ff26aa6c37 Work on to/from bytes/disk serialization methods 2017-05-29 11:45:45 +02:00
Matthew Honnibal
6b019b0540 Update to/from bytes methods 2017-05-29 10:14:20 +02:00
Matthew Honnibal
9239f06ed3 Fix german noun chunks iterator 2017-05-28 20:13:03 +02:00
Matthew Honnibal
fd9b6722a9 Fix noun chunks iterator for new stringstore 2017-05-28 20:12:10 +02:00
Matthew Honnibal
7996d21717 Fixes for new StringStore 2017-05-28 11:09:27 -05:00
Matthew Honnibal
8a24c60c1e Merge branch 'develop' of https://github.com/explosion/spaCy into develop 2017-05-28 08:12:05 -05:00
Matthew Honnibal
bc97bc292c Fix __call__ method 2017-05-28 08:11:58 -05:00
Matthew Honnibal
84e66ca6d4 WIP on stringstore change. 27 failures 2017-05-28 14:06:40 +02:00
Matthew Honnibal
39293ab2ee Merge branch 'develop' of https://github.com/explosion/spaCy into develop 2017-05-28 11:46:57 +02:00
Matthew Honnibal
dd052572d4 Update arc eager for SBD changes 2017-05-28 11:46:51 +02:00
Matthew Honnibal
c1263a844b Merge branch 'develop' of https://github.com/explosion/spaCy into develop 2017-05-27 18:32:57 -05:00
Matthew Honnibal
9e711c3476 Divide d_loss by batch size 2017-05-27 18:32:46 -05:00
Matthew Honnibal
a1d4c97fb7 Improve correctness of minibatching 2017-05-27 17:59:00 -05:00
Matthew Honnibal
49235017bf Merge branch 'develop' of https://github.com/explosion/spaCy into develop 2017-05-27 16:34:28 -05:00
Matthew Honnibal
7ebd26b8aa Use ordered dict to specify transitions 2017-05-27 15:52:20 -05:00
Matthew Honnibal
3eea5383a1 Add move_names property to parser 2017-05-27 15:51:55 -05:00
Matthew Honnibal
99316fa631 Use ordered dict to specify actions 2017-05-27 15:50:21 -05:00
Matthew Honnibal
655ca58c16 Clarifying change to StateC.clone 2017-05-27 15:49:37 -05:00
Matthew Honnibal
3d22fcaf0b Return None from parser if there are no annotations 2017-05-26 14:02:59 -05:00
Matthew Honnibal
3d5a536eaa Improve efficiency of parser batching 2017-05-26 11:31:23 -05:00
Matthew Honnibal
2cb7cc2db7 Remove commented code from parser 2017-05-25 14:55:09 -05:00
Matthew Honnibal
c245ff6b27 Rebatch parser inputs, with mid-sentence states 2017-05-25 11:18:59 -05:00
Matthew Honnibal
679efe79c8 Make parser update less hacky 2017-05-25 06:49:00 -05:00
Matthew Honnibal
e1cb5be0c7 Adjust dropout, depth and multi-task in parser 2017-05-24 20:11:41 -05:00
Matthew Honnibal
620df0414f Fix dropout in parser 2017-05-23 15:20:45 -05:00
Matthew Honnibal
8026c183d0 Add hacky logic to accelerate depth=0 case in parser 2017-05-23 11:06:49 -05:00
Matthew Honnibal
a8b6d11c5b Support optional maxout layer 2017-05-23 05:58:07 -05:00
Matthew Honnibal
c55b8fa7c5 Fix bugs in parse_batch 2017-05-23 05:57:52 -05:00
Matthew Honnibal
964707d795 Restore support for deeper networks in parser 2017-05-23 05:31:13 -05:00
Matthew Honnibal
6b918cc58e Support making updates periodically during training 2017-05-23 04:23:29 -05:00
Matthew Honnibal
3f725ff7b3 Roll back changes to parser update 2017-05-23 04:23:05 -05:00
Matthew Honnibal
3959d778ac Revert "Revert "WIP on improving parser efficiency"" 
This reverts commit 532afef4a8.
 2017-05-23 03:06:53 -05:00
Matthew Honnibal
532afef4a8 Revert "WIP on improving parser efficiency" 
This reverts commit bdaac7ab44.
 2017-05-23 03:05:25 -05:00
Matthew Honnibal
bdaac7ab44 WIP on improving parser efficiency 2017-05-23 02:59:31 -05:00
Matthew Honnibal
8a9e318deb Put the parsing loop in a nogil prange block 2017-05-22 17:58:12 -05:00
Matthew Honnibal
e2136232f9 Exclude states with no matching gold annotations from parsing 2017-05-22 10:30:12 -05:00
Matthew Honnibal
f00f821496 Fix pseudoprojectivity->nonproj 2017-05-22 06:14:42 -05:00
Matthew Honnibal
5d59e74cf6 PseudoProjectivity->nonproj 2017-05-22 05:49:53 -05:00
Matthew Honnibal
b45b4aa392 PseudoProjectivity --> nonproj 2017-05-22 05:17:44 -05:00
Matthew Honnibal
aae97f00e9 Fix nonproj import 2017-05-22 05:15:06 -05:00
Matthew Honnibal
2a5eb9f61e Make nonproj methods top-level functions, instead of class methods 2017-05-22 04:51:08 -05:00
Matthew Honnibal
33e2222839 Remove unused code in deprojectivize 2017-05-22 04:51:08 -05:00
Matthew Honnibal
025d9bbc37 Fix handling of non-projective deps 2017-05-22 04:51:08 -05:00
Matthew Honnibal
1b5fa68996 Do pseudo-projective pre-processing for parser 2017-05-22 04:51:08 -05:00
Matthew Honnibal
1d5d9838a2 Fix action collection for parser 2017-05-22 04:51:08 -05:00
Matthew Honnibal
3b7c108246 Pass tokvecs through as a list, instead of concatenated. Also fix padding 2017-05-20 13:23:32 -05:00
Matthew Honnibal
d52b65aec2 Revert "Move to contiguous buffer for token_ids and d_vectors" 
This reverts commit 3ff8c35a79.
 2017-05-20 11:26:23 -05:00
Matthew Honnibal
b272890a8c Try to move parser to simpler PrecomputedAffine class. Currently broken -- maybe the previous change 2017-05-20 06:40:10 -05:00
Matthew Honnibal
3ff8c35a79 Move to contiguous buffer for token_ids and d_vectors 2017-05-20 04:17:30 -05:00
Matthew Honnibal
8b04b0af9f Remove freqs from transition_system 2017-05-20 02:20:48 -05:00
Matthew Honnibal
a1ba20e2b1 Fix over-run on parse_batch 2017-05-19 18:57:30 -05:00
Matthew Honnibal
e84de028b5 Remove 'rebatch' op, and remove min-batch cap 2017-05-19 18:16:36 -05:00
Matthew Honnibal
c12ab47a56 Remove state argument in pipeline. Other changes 2017-05-19 13:26:36 -05:00
Matthew Honnibal
c2c825127a Fix use_params and pipe methods 2017-05-18 08:30:59 -05:00
Matthew Honnibal
fc8d3a112c Add util.env_opt support: Can set hyper params through environment variables. 2017-05-18 04:36:53 -05:00
Matthew Honnibal
d2626fdb45 Fix name error in nn parser 2017-05-18 04:31:01 -05:00
Matthew Honnibal
793430aa7a Get spaCy train command working with neural network 
* Integrate models into pipeline
* Add basic serialization (maybe incorrect)
* Fix pickle on vocab
 2017-05-17 12:04:50 +02:00
Matthew Honnibal
8cf097ca88 Redesign training to integrate NN components 
* Obsolete .parser, .entity etc names in favour of .pipeline
* Components no longer create models on initialization
* Models created by loading method (from_disk(), from_bytes() etc), or
    .begin_training()
* Add .predict(), .set_annotations() methods in components
* Pass state through pipeline, to allow components to share information
    more flexibly.
 2017-05-16 16:17:30 +02:00
Matthew Honnibal
5211645af3 Get data flowing through pipeline. Needs redesign 2017-05-16 11:21:59 +02:00
Matthew Honnibal
a9edb3aa1d Improve integration of NN parser, to support unified training API 2017-05-15 21:53:27 +02:00
Matthew Honnibal
4b9d69f428 Merge branch 'v2' into develop 
* Move v2 parser into nn_parser.pyx
* New TokenVectorEncoder class in pipeline.pyx
* New spacy/_ml.py module

Currently the two parsers live side-by-side, until we figure out how to
organize them.
 2017-05-14 01:10:23 +02:00
Matthew Honnibal
5cac951a16 Move new parser to nn_parser.pyx, and restore old parser, to make tests pass. 2017-05-14 00:55:01 +02:00
Matthew Honnibal
f8c02b4341 Remove cupy imports from parser, so it can work on CPU 2017-05-14 00:37:53 +02:00
Matthew Honnibal
e6d71e1778 Small fixes to parser 2017-05-13 17:19:04 -05:00
Matthew Honnibal
188c0f6949 Clean up unused import 2017-05-13 17:18:27 -05:00
Matthew Honnibal
f85c8464f7 Draft support of regression loss in parser 2017-05-13 17:17:27 -05:00
Matthew Honnibal
827b5af697 Update draft of parser neural network model 
Model is good, but code is messy. Currently requires Chainer, which may cause the build to fail on machines without a GPU.

Outline of the model:

We first predict context-sensitive vectors for each word in the input:

(embed_lower | embed_prefix | embed_suffix | embed_shape)
>> Maxout(token_width)
>> convolution ** 4

This convolutional layer is shared between the tagger and the parser. This prevents the parser from needing tag features.
To boost the representation, we make a "super tag" with POS, morphology and dependency label. The tagger predicts this
by adding a softmax layer onto the convolutional layer --- so, we're teaching the convolutional layer to give us a
representation that's one affine transform from this informative lexical information. This is obviously good for the
parser (which backprops to the convolutions too).

The parser model makes a state vector by concatenating the vector representations for its context tokens. Current
results suggest few context tokens works well. Maybe this is a bug.

The current context tokens:

* S0, S1, S2: Top three words on the stack
* B0, B1: First two words of the buffer
* S0L1, S0L2: Leftmost and second leftmost children of S0
* S0R1, S0R2: Rightmost and second rightmost children of S0
* S1L1, S1L2, S1R2, S1R, B0L1, B0L2: Likewise for S1 and B0

This makes the state vector quite long: 13*T, where T is the token vector width (128 is working well). Fortunately,
there's a way to structure the computation to save some expense (and make it more GPU friendly).

The parser typically visits 2*N states for a sentence of length N (although it may visit more, if it back-tracks
with a non-monotonic transition). A naive implementation would require 2*N (B, 13*T) @ (13*T, H) matrix multiplications
for a batch of size B. We can instead perform one (B*N, T) @ (T, 13*H) multiplication, to pre-compute the hidden
weights for each positional feature wrt the words in the batch. (Note that our token vectors come from the CNN
-- so we can't play this trick over the vocabulary. That's how Stanford's NN parser works --- and why its model
is so big.)

This pre-computation strategy allows a nice compromise between GPU-friendliness and implementation simplicity.
The CNN and the wide lower layer are computed on the GPU, and then the precomputed hidden weights are moved
to the CPU, before we start the transition-based parsing process. This makes a lot of things much easier.
We don't have to worry about variable-length batch sizes, and we don't have to implement the dynamic oracle
in CUDA to train.

Currently the parser's loss function is multilabel log loss, as the dynamic oracle allows multiple states to
be 0 cost. This is defined as:

(exp(score) / Z) - (exp(score) / gZ)

Where gZ is the sum of the scores assigned to gold classes. I'm very interested in regressing on the cost directly,
but so far this isn't working well.

Machinery is in place for beam-search, which has been working well for the linear model. Beam search should benefit
greatly from the pre-computation trick.
 2017-05-12 16:09:15 -05:00
Matthew Honnibal
b44f7e259c Clean up unused parser code 2017-05-08 15:42:04 +02:00
Matthew Honnibal
17efb1c001 Change width 2017-05-08 08:40:13 -05:00
Matthew Honnibal
bef89ef23d Mergery 2017-05-08 08:29:36 -05:00
Matthew Honnibal
50ddc9fc45 Fix infinite loop bug 2017-05-08 07:54:26 -05:00
Matthew Honnibal
a66a4a4d0f Replace einsums 2017-05-08 14:46:50 +02:00
Matthew Honnibal
8d2eab74da Use PretrainableMaxouts 2017-05-08 14:24:55 +02:00
Matthew Honnibal
2e2268a442 Precomputable hidden now working 2017-05-08 11:36:37 +02:00
Matthew Honnibal
10682d35ab Get pre-computed version working 2017-05-08 00:38:35 +02:00
Matthew Honnibal
35458987e8 Checkpoint -- nearly finished reimpl 2017-05-07 23:05:01 +02:00
Matthew Honnibal
4441866f55 Checkpoint -- nearly finished reimpl 2017-05-07 22:47:06 +02:00
Matthew Honnibal
6782eedf9b Tmp GPU code 2017-05-07 11:04:24 -05:00
Matthew Honnibal
e420e5a809 Tmp 2017-05-07 07:31:09 -05:00
Matthew Honnibal
700979fb3c CPU/GPU compat 2017-05-07 04:01:11 +02:00
Matthew Honnibal
f99f5b75dc working residual net 2017-05-07 03:57:26 +02:00
Matthew Honnibal
bdf2dba9fb WIP on refactor, with hidde pre-computing 2017-05-07 02:02:43 +02:00
Matthew Honnibal
b439e04f8d Learning smoothly 2017-05-06 20:38:12 +02:00
Matthew Honnibal
08bee76790 Learns things 2017-05-06 18:24:38 +02:00
Matthew Honnibal
bcf4cd0a5f Learns things 2017-05-06 17:37:36 +02:00
Matthew Honnibal
8e48b58cd6 Gradients look correct 2017-05-06 16:47:15 +02:00
Matthew Honnibal
7e04260d38 Data running through, likely errors in model 2017-05-06 14:22:20 +02:00
Matthew Honnibal
ef4fa594aa Draft of NN parser, to be tested 2017-05-05 19:20:39 +02:00
Matthew Honnibal
ccaf26206b Pseudocode for parser 2017-05-04 12:17:59 +02:00
Matthew Honnibal
2da16adcc2 Add dropout optin for parser and NER 
Dropout can now be specified in the `Parser.update()` method via
the `drop` keyword argument, e.g.

    nlp.entity.update(doc, gold, drop=0.4)

This will randomly drop 40% of features, and multiply the value of the
others by 1. / 0.4. This may be useful for generalising from small data
sets.

This commit also patches the examples/training/train_new_entity_type.py
example, to use dropout and fix the output (previously it did not output
the learned entity).
 2017-04-27 13:18:39 +02:00
Matthew Honnibal
d2436dc17b Update fix for Issue #999 2017-04-23 18:14:37 +02:00
Matthew Honnibal
60703cede5 Ensure noun chunks can't be nested. Closes #955 2017-04-23 17:56:39 +02:00
Matthew Honnibal
4eef200bab Persist the actions within spacy.parser.cfg 2017-04-20 17:02:44 +02:00
Matthew Honnibal
137b210bcf Restore use of FTRL training 2017-04-16 18:02:42 +02:00
Matthew Honnibal
45464d065e Remove print statement 2017-04-15 16:11:43 +02:00
Matthew Honnibal
c76cb8af35 Fix training for new labels 2017-04-15 16:11:26 +02:00
Matthew Honnibal
4884b2c113 Refix StepwiseState 2017-04-15 16:00:28 +02:00
Matthew Honnibal
1a98e48b8e Fix Stepwisestate' 2017-04-15 13:35:01 +02:00
ines
0739ae7b76 Tidy up and fix formatting and imports 2017-04-15 13:05:15 +02:00
Matthew Honnibal
354458484c WIP on add_label bug during NER training 
Currently when a new label is introduced to NER during training,
it causes the labels to be read in in an unexpected order. This
invalidates the model.
 2017-04-14 23:52:17 +02:00
Matthew Honnibal
49e2de900e Add costs property to StepwiseState, to show which moves are gold. 2017-04-10 11:37:04 +02:00
Matthew Honnibal
cc36c308f4 Fix noun_chunk rules around coordination 
Closes #693.
 2017-04-07 17:06:40 +02:00
Matthew Honnibal
1bb7b4ca71 Add comment 2017-03-31 13:59:19 +02:00
Matthew Honnibal
47a3ef06a6 Unhack deprojetivization, moving it into pipeline 
Previously the deprojectivize() call was attached to the transition
system, and only called for German. Instead it should be a separate
process, called after the parser. This makes it available for any
language. Closes #898.
 2017-03-31 12:31:50 +02:00
Matthew Honnibal
a9b1f23c7d Enable regression loss for parser 2017-03-26 09:26:30 -05:00
Matthew Honnibal
b487b8735a Decrease beam density, and fix Python 3 problem in beam 2017-03-20 12:56:05 +01:00
Matthew Honnibal
c90dc7ac29 Clean up state initiatisation in transition system 2017-03-16 11:59:11 -05:00
Matthew Honnibal
a46933a8fe Clean up FTRL parsing stuff. 2017-03-16 11:58:20 -05:00
Matthew Honnibal
2611ac2a89 Fix scorer bug for NER, related to ambiguity between missing annotations and misaligned tokens 2017-03-16 09:38:28 -05:00
Matthew Honnibal
3d0833c3df Fix off-by-1 in parse features fill_context 2017-03-15 19:55:35 -05:00
Matthew Honnibal
4ef68c413f Approximate cost in Break transition, to speed things up a bit. 2017-03-15 16:40:27 -05:00
Matthew Honnibal
8543db8a5b Use ftrl optimizer in parser 2017-03-15 11:56:37 -05:00
Matthew Honnibal
d719f8e77e Use nogil in parser, and set L1 to 0.0 by default 2017-03-15 09:31:01 -05:00
Matthew Honnibal
c61c501406 Update beam-parser to allow parser to maintain nogil 2017-03-15 09:30:22 -05:00
Matthew Honnibal
c79b3129e3 Fix setting of empty lexeme in initial parse state 2017-03-15 09:26:53 -05:00
Matthew Honnibal
6c4108c073 Add header for beam parser 2017-03-11 12:45:12 -06:00
Matthew Honnibal
931feb3360 Allow beam parsing for NER 2017-03-11 11:12:01 -06:00
Matthew Honnibal
ca9c8c57c0 Add iteration argument to parser.update 2017-03-11 07:00:47 -06:00
Matthew Honnibal
d59c6926c1 I think this fixes the segfault 2017-03-11 06:58:34 -06:00
Matthew Honnibal
318b9e32ff WIP on beam parser. Currently segfaults. 2017-03-11 06:19:52 -06:00
Matthew Honnibal
b0d80dc9ae Update name of 'train' function in BeamParser 2017-03-10 14:35:43 -06:00
Matthew Honnibal
d11f1a4ddf Record negative costs in non-monotonic arc eager oracle 2017-03-10 11:22:04 -06:00
Matthew Honnibal
ecf91a2dbb Support beam parser 2017-03-10 11:21:21 -06:00
Matthew Honnibal
c62da02344 Use ftrl training, to learn compressed model. 2017-03-09 18:43:21 -06:00
Matthew Honnibal
40703988bc Use FTRL training in parser 2017-03-08 01:38:51 +01:00
Roman Inflianskas
66e1109b53 Add support for Universal Dependencies v2.0 2017-03-03 13:17:34 +01:00
Matthew Honnibal
97a1286129 Revert changes to tagger and parser for thinc 6 2017-01-09 10:08:34 -06:00
Matthew Honnibal
af81ac8bb0 Use thinc 6.0 2016-12-29 11:58:42 +01:00
Matthew Honnibal
bc0a202c9c Fix unicode problem in nonproj module 2016-11-25 17:29:17 -06:00
Matthew Honnibal
159e8c46e1 Merge old training fixes with newer state 2016-11-25 09:16:36 -06:00
Matthew Honnibal
39341598bb Fix NER label calculation 2016-11-25 09:02:22 -06:00
Matthew Honnibal
ca773a1f53 Tweak arc_eager n_gold to deal with negative costs, and improve error message. 2016-11-25 09:01:52 -06:00
Matthew Honnibal
608d8f5421 Pass cfg through parser, and have is_valid default to 1, not 0 when resetting state 2016-11-25 09:00:21 -06:00
Matthew Honnibal
b8c4f5ea76 Allow German noun chunks to work on Span 
Update the German noun chunks iterator, so that it also works on Span objects.
 2016-11-24 23:30:15 +11:00
Pokey Rule
3e3bda142d Add noun_chunks to Span 2016-11-24 10:47:20 +00:00
Matthew Honnibal
b86f8af0c1 Fix doc strings 2016-11-01 12:25:36 +01:00
Matthew Honnibal
708ea22208 Infer types in transition_system.pyx 2016-10-27 18:08:13 +02:00
Matthew Honnibal
301f3cc898 Fix Issue #429. Add an initialize_state method to the named entity recogniser that adds missing entity types. This is a messy place to add this, because it's strange to have the method mutate state. A better home for this logic could be found. 2016-10-27 18:01:55 +02:00
Matthew Honnibal
03a520ec4f Change signature of Parser.parseC, so that nr_class is read from the transition system. This allows the transition system to modify the number of actions in initialize_state. 2016-10-27 17:58:56 +02:00
Matthew Honnibal
a209b10579 Improve error message when oracle fails for non-projective trees, re Issue #571. 2016-10-24 20:31:30 +02:00
Matthew Honnibal
3e688e6d4b Fix issue #514 -- serializer fails when new entity type has been added. The fix here is quite ugly. It's best to add the entities ASAP after loading the NLP pipeline, to mitigate the brittleness. 2016-10-23 17:45:44 +02:00
Matthew Honnibal
59038f7efa Restore support for prior data format -- specifically, the labels field of the config. 2016-10-17 00:53:26 +02:00
Matthew Honnibal
7887ab3b36 Fix default use of feature_templates in parser 2016-10-16 21:41:56 +02:00
Matthew Honnibal
f787cd29fe Refactor the pipeline classes to make them more consistent, and remove the redundant blank() constructor. 2016-10-16 21:34:57 +02:00
Matthew Honnibal
274a4d4272 Fix queue Python property in StateClass 2016-10-16 17:04:41 +02:00
Matthew Honnibal
e8c8aa08ce Make action_name optional in StepwiseState 2016-10-16 17:04:16 +02:00
Matthew Honnibal
4fc56d4a31 Rename 'labels' to 'actions' in parser options 2016-10-16 11:42:26 +02:00
Matthew Honnibal
3259a63779 Whitespace 2016-10-16 01:47:28 +02:00
Matthew Honnibal
d9ae2d68af Load features by string-name for backwards compatibility. 2016-10-12 20:15:11 +02:00
Matthew Honnibal
3a03c668c3 Fix message in ParserStateError 2016-10-12 14:44:31 +02:00
Matthew Honnibal
6bf505e865 Fix error on ParserStateError 2016-10-12 14:35:55 +02:00
Matthew Honnibal
ea23b64cc8 Refactor training, with new spacy.train module. Defaults still a little awkward. 2016-10-09 12:24:24 +02:00
Matthew Honnibal
1d70db58aa Revert "Changes to iterators.pyx for new StringStore scheme" 
This reverts commit 4f794b215a.
 2016-09-30 20:19:53 +02:00
Matthew Honnibal
9e09b39b9f Revert "Changes to transition systems for new StringStore scheme" 
This reverts commit 0442e0ab1e.
 2016-09-30 20:11:49 +02:00
Matthew Honnibal
e3285f6f30 Revert "Fix report of ParserStateError" 
This reverts commit 78f19baafa.
 2016-09-30 20:11:33 +02:00
Matthew Honnibal
78f19baafa Fix report of ParserStateError 2016-09-30 19:59:22 +02:00
Matthew Honnibal
0442e0ab1e Changes to transition systems for new StringStore scheme 2016-09-30 19:58:51 +02:00
Matthew Honnibal
4f794b215a Changes to iterators.pyx for new StringStore scheme 2016-09-30 19:57:49 +02:00
Matthew Honnibal
4cbf0d3bb6 Handle errors when no valid actions are available, pointing users to the issue tracker. 2016-09-27 19:19:53 +02:00
Matthew Honnibal
430473bd98 Raise errors when no actions are available, re Issue #429 2016-09-27 19:09:37 +02:00
Matthew Honnibal
8e7df3c4ca Expect the parser data, if parser.load() is called. 2016-09-27 14:02:12 +02:00
Matthew Honnibal
a44763af0e Fix Issue #469: Incorrectly cased root label in noun chunk iterator 2016-09-27 13:13:01 +02:00
Matthew Honnibal
e07b9665f7 Don't expect parser model 2016-09-26 18:09:33 +02:00
Matthew Honnibal
ee6fa106da Fix parser features 2016-09-26 17:57:32 +02:00
Matthew Honnibal
e607e4b598 Fix parser loading 2016-09-26 17:51:11 +02:00
Matthew Honnibal
2debc4e0a2 Add .blank() method to Parser. Start housing default dep labels and entity types within the Defaults class. 2016-09-26 11:57:54 +02:00
Matthew Honnibal
fd65cf6cbb Finish refactoring data loading 2016-09-24 20:26:17 +02:00
Matthew Honnibal
83e364188c Mostly finished loading refactoring. Design is in place, but doesn't work yet. 2016-09-24 15:42:01 +02:00
Matthew Honnibal
60fdf4d5f1 Remove commented out debuggng code 2016-09-24 01:17:18 +02:00
Matthew Honnibal
070af4af9d Revert "* Working neural net, but features hacky. Switching to extractor." 
This reverts commit 7c2f1a673b.
 2016-09-21 12:26:14 +02:00
Matthew Honnibal
7c2f1a673b * Working neural net, but features hacky. Switching to extractor. 2016-05-26 19:06:10 +02:00
Matthew Honnibal
13fad36e49 * Cosmetic change to english noun chunks iterator -- use enumerate instead of range loop 2016-05-20 10:11:05 +02:00
Wolfgang Seeker
7b78239436 add fix for German noun chunk iterator (issue #365) 2016-05-06 01:41:26 +02:00
Matthew Honnibal
bb94022975 * Fix Issue #365: Error introduced during noun phrase chunking, due to use of corrected PRON/PROPN/etc tags. 2016-05-06 00:21:05 +02:00
Wolfgang Seeker
dbf8f5f3ec fix bug in StateC.set_break() 2016-05-05 15:15:34 +02:00
Wolfgang Seeker
3c44b5dc1a call deprojectivization after parsing 2016-05-05 15:10:36 +02:00
Matthew Honnibal
472f576b82 * Deprojectivize German parses 2016-05-05 15:01:10 +02:00
Wolfgang Seeker
e4ea2bea01 fix whitespace 2016-05-04 07:40:38 +02:00
Wolfgang Seeker
5bf2fd1f78 make the code less cryptic 2016-05-03 17:19:05 +02:00
Wolfgang Seeker
a06fca9fdf German noun chunk iterator now doesn't return tokens more than once 2016-05-03 16:58:59 +02:00
Wolfgang Seeker
7b246c13cb reformulate noun chunk tests for English 2016-05-03 14:24:35 +02:00
Matthew Honnibal
1f1532142f * Fix cost calculation on non-monotonic oracle 2016-05-03 00:21:08 +02:00
Matthew Honnibal
508fd1f6dc * Refactor noun chunk iterators, so that they're simple functions. Install the iterator when the Doc is created, but allow users to write to the noun_chunk_iterator attribute. The iterator functions accept an object and yield (int start, int end, int label) triples. 2016-05-02 14:25:10 +02:00
Matthew Honnibal
77609588b6 * Fix assignment of root label to words left as root implicitly, after parsing ends. 2016-04-25 19:41:59 +00:00
Matthew Honnibal
7c2d2deaa7 * Revise transition system so that the Break transition retains sole responsibility for setting sentence boundaries. Re Issue #322 2016-04-25 19:41:59 +00:00
Wolfgang Seeker
12024b0b0a bugfix: introducing multiple roots now updates original head's properties 
adjust tests to rely less on statistical model
 2016-04-20 16:42:41 +02:00
Wolfgang Seeker
b98cc3266d bugfix: iterators now reset properly when called a second time 2016-04-15 17:49:16 +02:00
Wolfgang Seeker
289b10f441 remove some comments 2016-04-14 15:37:51 +02:00
Wolfgang Seeker
d99a9cbce9 different handling of space tokens 
space tokens are now always attached to the previous non-space token
there are two exceptions:
leading space tokens are attached to the first following non-space token
in input that consists exclusively of space tokens, the last space token
is the head of all others.
 2016-04-13 15:28:28 +02:00
Wolfgang Seeker
d328e0b4a8 Merge branch 'master' into space_head_bug 2016-04-11 12:11:01 +02:00
Wolfgang Seeker
80bea62842 bugfix in unit test 2016-04-08 16:46:44 +02:00
Wolfgang Seeker
1fe911cdb0 bigfix 2016-04-07 18:19:51 +02:00
Matthew Honnibal
872695759d Merge pull request #306 from wbwseeker/german_noun_chunks 
add German noun chunk functionality
 2016-04-08 00:54:24 +10:00
Wolfgang Seeker
7195b6742d add restrictions to L-arc and R-arc to prevent space heads 2016-03-28 10:40:52 +02:00
Wolfgang Seeker
5e2e8e951a add baseclass DocIterator for iterators over documents 
add classes for English and German noun chunks

the respective iterators are set for the document when created by the parser
as they depend on the annotation scheme of the parsing model
 2016-03-16 15:53:35 +01:00
Wolfgang Seeker
46e3f979f1 add function for setting head and label to token 
change PseudoProjectivity.deprojectivize to use these functions
 2016-03-11 17:31:06 +01:00
Wolfgang Seeker
7adbd7a785 replace Counter with normal dict 2016-03-03 21:36:27 +01:00
Wolfgang Seeker
1ae487a4f6 add backwards compatibility with python 2.6 2016-03-03 21:18:12 +01:00
Wolfgang Seeker
72b8df0684 turned PseudoProjectivity into a normal python class 2016-03-03 19:05:08 +01:00
Wolfgang Seeker
690c5acabf adjust train.py to train both english and german models 2016-03-03 15:21:00 +01:00
Wolfgang Seeker
3448cb40a4 integrated pseudo-projective parsing into parser 
- nonproj.pyx holds a class PseudoProjectivity which currently holds
  all functionality to implement Nivre & Nilsson 2005's pseudo-projective
  parsing using the HEAD decoration scheme
- changed lefts/rights in Token to account for possible non-projective
  structures
 2016-03-01 10:09:08 +01:00
Wolfgang Seeker
56b7210e82 moved nonproj.py to syntax/nonproj.pyx 2016-02-25 15:08:49 +01:00
Matthew Honnibal
1b83cb9dfa * Fix Issue #251: Incorrect right edge calculation on left-clobber low in the tree 2016-02-07 00:00:42 +01:00
Matthew Honnibal
4412a70dc5 * Initialize StateC._empty_token to 0, to avoid undefined behaviour. 2016-02-06 13:34:38 +01:00
Matthew Honnibal
1b41f868d2 * Check for errors in parser, and parallelise the left-over batch 2016-02-06 10:06:30 +01:00
Matthew Honnibal
165ca28b80 * Set is_parsed flag in Parser.pipe 2016-02-05 19:51:44 +01:00
Matthew Honnibal
bdd579db0a * Set is_parsed flag in Parser.pipe 2016-02-05 19:50:11 +01:00
Matthew Honnibal
b04c9aad71 * Fix off-by-one in Parser.pipe 2016-02-05 19:37:50 +01:00
Matthew Honnibal
048dfe35aa * cimport cython.parallel 2016-02-05 12:20:42 +01:00
Matthew Honnibal
8a13cebdcc * Update for modified thinc interface 2016-02-05 11:44:39 +01:00
Matthew Honnibal
84b247ef83 * Add a .pipe method, that takes a stream of input, operates on it, and streams the output. Internally, the stream may be buffered, to allow multi-threading. 2016-02-03 02:10:58 +01:00
Matthew Honnibal
e3db39dd21 * Fix compiler warning about signed/unsigned comparison 2016-02-01 09:08:07 +01:00
Matthew Honnibal
b3802562d6 Merge branch 'rethinc2' of https://github.com/honnibal/spaCy into rethinc2 2016-02-01 08:59:24 +01:00
Matthew Honnibal
4b08a3fafd * Fix merge conflict 2016-02-01 08:58:18 +01:00
Matthew Honnibal
5188f6d9d8 * Fix parseC function 2016-02-01 08:48:48 +01:00
Matthew Honnibal
bcf8f7ba40 * Add a parse_batch method to Parser, that releases the GIL around a batch of documents. 2016-02-01 08:34:55 +01:00
Matthew Honnibal
d5579cd0d8 Merge branch 'rethinc2' of https://github.com/honnibal/spaCy into rethinc2 2016-02-01 03:08:49 +01:00
Matthew Honnibal
490ba65398 * Use openmp in parser 2016-02-01 03:08:42 +01:00
Matthew Honnibal
cb78d91ec5 * Fix ArcEager.set_valid 2016-02-01 03:07:37 +01:00
Matthew Honnibal
28e5ad62bc * Pass a StateC pointer into the transition and validation methods in the parser, so that the GIL can be released over a batch of documents 2016-02-01 03:00:15 +01:00
Matthew Honnibal
a47f00901b * Pass a StateC pointer into the transition and validation methods in the parser, so that the GIL can be released over a batch of documents 2016-02-01 02:58:14 +01:00
Matthew Honnibal
daaad66448 * Now fully proxied 2016-02-01 02:37:08 +01:00
Matthew Honnibal
7a0e3bb9c1 * Continue proxying. Some problem currently 2016-02-01 02:22:21 +01:00
Matthew Honnibal
2169bbb7ea * Shadow StateClass with StateC, to start proxying 2016-02-01 01:16:14 +01:00
Matthew Honnibal
2fa228458e * Add _state file, which StateClass will proxy to 2016-02-01 01:09:21 +01:00